More than 300 homologs were found in PanDaTox collection
for query gene Dhaf_4100 on replicon NC_011830
Organism: Desulfitobacterium hafniense DCB-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  100 
 
 
426 aa  844    Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  51.15 
 
 
445 aa  269  8e-71  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_011830  Dhaf_3430  cell envelope-related transcriptional attenuator  50 
 
 
439 aa  265  2e-69  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0225853  n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  41.25 
 
 
419 aa  249  5e-65  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  37.95 
 
 
414 aa  238  1e-61  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  42.52 
 
 
411 aa  236  7e-61  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  37.6 
 
 
418 aa  211  2e-53  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  41.75 
 
 
406 aa  207  2e-52  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  39.87 
 
 
380 aa  200  3.9999999999999996e-50  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  38.33 
 
 
319 aa  189  1e-46  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_013205  Aaci_1875  cell envelope-related transcriptional attenuator  37.3 
 
 
344 aa  186  1.0000000000000001e-45  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  38.34 
 
 
344 aa  169  6e-41  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  34.34 
 
 
308 aa  161  2e-38  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_011729  PCC7424_2873  cell envelope-related transcriptional attenuator  37.39 
 
 
475 aa  144  2e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  33.33 
 
 
317 aa  144  2e-33  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  39.43 
 
 
453 aa  144  3e-33  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_011884  Cyan7425_3856  cell envelope-related transcriptional attenuator  30.79 
 
 
451 aa  143  7e-33  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  36.9 
 
 
436 aa  142  9.999999999999999e-33  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  33.01 
 
 
405 aa  141  1.9999999999999998e-32  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_008312  Tery_2604  cell envelope-related transcriptional attenuator  37.26 
 
 
471 aa  139  7e-32  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.22991 
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  30.51 
 
 
333 aa  138  2e-31  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  30.51 
 
 
333 aa  138  2e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  30.51 
 
 
335 aa  138  2e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  30.51 
 
 
333 aa  138  2e-31  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  30.51 
 
 
333 aa  138  2e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2953  cell envelope-related transcriptional attenuator  33.97 
 
 
502 aa  138  2e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.873931 
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  30.61 
 
 
333 aa  137  3.0000000000000003e-31  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  33.85 
 
 
335 aa  137  3.0000000000000003e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  33.33 
 
 
337 aa  137  3.0000000000000003e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  34.45 
 
 
407 aa  137  4e-31  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  29.93 
 
 
333 aa  137  5e-31  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_011726  PCC8801_1109  cell envelope-related transcriptional attenuator  31.15 
 
 
481 aa  136  6.0000000000000005e-31  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1138  cell envelope-related transcriptional attenuator  31.15 
 
 
481 aa  136  6.0000000000000005e-31  Cyanothece sp. PCC 8802  Bacteria  normal  0.441684  normal 
 
 
-
 
NC_007413  Ava_0411  cell envelope-like transcriptional attenuator  36.65 
 
 
472 aa  135  9.999999999999999e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.207765 
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  32.51 
 
 
383 aa  135  9.999999999999999e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2078  transcription antiterminator, LytR family  30.27 
 
 
333 aa  135  9.999999999999999e-31  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000542577  n/a   
 
 
-
 
NC_011725  BCB4264_A1975  transcription antiterminator, LytR family  29.93 
 
 
333 aa  135  1.9999999999999998e-30  Bacillus cereus B4264  Bacteria  normal  0.258453  n/a   
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  31.61 
 
 
495 aa  134  3e-30  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B3352  transcription antiterminator, LytR family  29.59 
 
 
335 aa  134  3e-30  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000199263  hitchhiker  0.0000000000000086496 
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  33.2 
 
 
329 aa  134  3e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  34.78 
 
 
338 aa  134  3e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  33.92 
 
 
374 aa  134  3.9999999999999996e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  37.16 
 
 
337 aa  132  1.0000000000000001e-29  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  36.7 
 
 
337 aa  132  1.0000000000000001e-29  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  36.7 
 
 
333 aa  132  1.0000000000000001e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  37.61 
 
 
338 aa  132  1.0000000000000001e-29  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  36.7 
 
 
338 aa  132  1.0000000000000001e-29  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_011772  BCG9842_B4695  transcription antiterminator, LytR family  33.46 
 
 
338 aa  131  2.0000000000000002e-29  Bacillus cereus G9842  Bacteria  normal  0.541641  hitchhiker  0.0000000308245 
 
 
-
 
NC_002976  SERP0932  transcriptional regulator, putative  34.39 
 
 
329 aa  131  3e-29  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1232  cell envelope-related transcriptional attenuator  34.41 
 
 
377 aa  130  3e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.113674  normal 
 
 
-
 
NC_011725  BCB4264_A0643  transcription antiterminator, LytR family  34.57 
 
 
338 aa  130  3e-29  Bacillus cereus B4264  Bacteria  normal  0.849345  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  32.3 
 
 
377 aa  130  4.0000000000000003e-29  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0516  LytR family transcriptional regulator  36.24 
 
 
337 aa  130  4.0000000000000003e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0516  LytR family transcriptional regulator  36.24 
 
 
337 aa  130  4.0000000000000003e-29  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  32.41 
 
 
375 aa  129  7.000000000000001e-29  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_014248  Aazo_3223  cell envelope-like transcriptional attenuator  36.73 
 
 
471 aa  129  8.000000000000001e-29  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  32.41 
 
 
375 aa  129  1.0000000000000001e-28  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  32.41 
 
 
375 aa  129  1.0000000000000001e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  32.41 
 
 
375 aa  129  1.0000000000000001e-28  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  32.41 
 
 
375 aa  129  1.0000000000000001e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_3582  cell envelope-related transcriptional attenuator  31.44 
 
 
492 aa  129  1.0000000000000001e-28  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1857  cell envelope-related transcriptional attenuator  33.46 
 
 
456 aa  129  1.0000000000000001e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.046941  normal 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  31.96 
 
 
377 aa  128  2.0000000000000002e-28  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  31.25 
 
 
372 aa  127  4.0000000000000003e-28  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_011726  PCC8801_2524  cell envelope-related transcriptional attenuator  31.06 
 
 
492 aa  127  5e-28  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  31.25 
 
 
374 aa  127  6e-28  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  34.98 
 
 
353 aa  125  1e-27  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  35.6 
 
 
322 aa  124  2e-27  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  34.8 
 
 
299 aa  124  2e-27  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1572  cell envelope-related transcriptional attenuator  33.48 
 
 
384 aa  124  3e-27  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.0072424  normal  0.757675 
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  34.22 
 
 
356 aa  124  3e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_010320  Teth514_2233  cell envelope-related transcriptional attenuator  34.21 
 
 
303 aa  124  3e-27  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  32.84 
 
 
403 aa  123  5e-27  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  32.15 
 
 
302 aa  122  9e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  28.16 
 
 
563 aa  122  1.9999999999999998e-26  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  33.01 
 
 
304 aa  121  3e-26  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_3102  cell envelope-related transcriptional attenuator  34.66 
 
 
311 aa  120  3.9999999999999996e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4961  membrane-bound transcriptional regulator LytR  31.51 
 
 
303 aa  120  6e-26  Bacillus cereus E33L  Bacteria  normal  0.0205697  n/a   
 
 
-
 
NC_009972  Haur_1198  cell envelope-related transcriptional attenuator  28.76 
 
 
585 aa  120  6e-26  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5115  membrane-bound transcriptional regulator LytR  31.51 
 
 
303 aa  119  7.999999999999999e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5506  membrane-bound transcriptional regulator LytR  31.51 
 
 
303 aa  119  7.999999999999999e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00691653  n/a   
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  34.14 
 
 
304 aa  119  9.999999999999999e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_014248  Aazo_1762  cell envelope-like transcriptional attenuator  28.34 
 
 
501 aa  119  9.999999999999999e-26  'Nostoc azollae' 0708  Bacteria  normal  0.103676  n/a   
 
 
-
 
NC_005957  BT9727_3347  transcriptional regulator LytR, attenuator for lytABC and lytR expression  32.71 
 
 
345 aa  118  1.9999999999999998e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000255205  n/a   
 
 
-
 
NC_009487  SaurJH9_1423  cell envelope-related transcriptional attenuator  35.22 
 
 
327 aa  118  1.9999999999999998e-25  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.302612  n/a   
 
 
-
 
NC_007604  Synpcc7942_0961  cell envelope-related function transcriptional attenuator  31.35 
 
 
337 aa  118  1.9999999999999998e-25  Synechococcus elongatus PCC 7942  Bacteria  normal  0.472241  normal 
 
 
-
 
NC_009632  SaurJH1_1451  transcription attenuator LytR  35.22 
 
 
327 aa  118  1.9999999999999998e-25  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0694  cell envelope-related transcriptional attenuator  30.71 
 
 
401 aa  118  1.9999999999999998e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.12922  n/a   
 
 
-
 
NC_011772  BCG9842_B1619  transcription antiterminator, LytR family  32.34 
 
 
345 aa  118  1.9999999999999998e-25  Bacillus cereus G9842  Bacteria  hitchhiker  0.00116574  hitchhiker  0.0000348163 
 
 
-
 
NC_006274  BCZK3295  transcriptional regulator LytR, attenuator for lytABC and lytR expression  32.34 
 
 
345 aa  117  3e-25  Bacillus cereus E33L  Bacteria  normal  0.189328  n/a   
 
 
-
 
NC_011725  BCB4264_A3698  transcription antiterminator, LytR family  32.71 
 
 
345 aa  117  3e-25  Bacillus cereus B4264  Bacteria  hitchhiker  0.00180581  n/a   
 
 
-
 
NC_005945  BAS3381  LytR family transcription antiterminator  32.71 
 
 
345 aa  117  3.9999999999999997e-25  Bacillus anthracis str. Sterne  Bacteria  normal  0.288134  n/a   
 
 
-
 
NC_007530  GBAA_3647  LytR family transcription antiterminator  32.71 
 
 
345 aa  117  3.9999999999999997e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0513784  n/a   
 
 
-
 
NC_011773  BCAH820_3598  transcription antiterminator, LytR family  32.71 
 
 
345 aa  117  3.9999999999999997e-25  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000000156827 
 
 
-
 
NC_011658  BCAH187_A0946  transcription antiterminator, LytR family  31.46 
 
 
400 aa  117  3.9999999999999997e-25  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000012569  n/a   
 
 
-
 
NC_013946  Mrub_2282  cell envelope-related transcriptional attenuator  33.33 
 
 
389 aa  117  6e-25  Meiothermus ruber DSM 1279  Bacteria  normal  0.072814  hitchhiker  0.000000103578 
 
 
-
 
NC_007413  Ava_2679  cell envelope-like transcriptional attenuator  29.3 
 
 
503 aa  116  7.999999999999999e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_5355  membrane-bound transcriptional regulator LytR  31.19 
 
 
303 aa  116  7.999999999999999e-25  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A0838  transcription antiterminator, LytR family  31.82 
 
 
399 aa  116  8.999999999999998e-25  Bacillus cereus B4264  Bacteria  hitchhiker  0.00382216  n/a   
 
 
-
 
NC_003909  BCE_3605  LytR family transcription antiterminator  30.69 
 
 
345 aa  115  1.0000000000000001e-24  Bacillus cereus ATCC 10987  Bacteria  normal  0.0149783  n/a   
 
 
-
 
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