More than 300 homologs were found in PanDaTox collection
for query gene Swol_1921 on replicon NC_008346
Organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  100 
 
 
406 aa  827    Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  42.9 
 
 
445 aa  263  4e-69  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  39.31 
 
 
414 aa  246  6.999999999999999e-64  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  43.97 
 
 
380 aa  239  6.999999999999999e-62  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  38.23 
 
 
419 aa  228  1e-58  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  44.48 
 
 
411 aa  222  9e-57  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  42.12 
 
 
418 aa  221  9.999999999999999e-57  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  44.49 
 
 
426 aa  203  5e-51  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  43.15 
 
 
319 aa  183  4.0000000000000006e-45  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_011830  Dhaf_3430  cell envelope-related transcriptional attenuator  34.99 
 
 
439 aa  182  1e-44  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0225853  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  34.28 
 
 
405 aa  165  1.0000000000000001e-39  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  40.51 
 
 
344 aa  164  2.0000000000000002e-39  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  37.18 
 
 
308 aa  160  3e-38  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_011729  PCC7424_2873  cell envelope-related transcriptional attenuator  36.82 
 
 
475 aa  158  2e-37  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013205  Aaci_1875  cell envelope-related transcriptional attenuator  35.02 
 
 
344 aa  156  6e-37  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_2604  cell envelope-related transcriptional attenuator  35.83 
 
 
471 aa  155  9e-37  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.22991 
 
 
-
 
NC_014248  Aazo_3223  cell envelope-like transcriptional attenuator  34.83 
 
 
471 aa  152  8e-36  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_3582  cell envelope-related transcriptional attenuator  35.23 
 
 
492 aa  151  2e-35  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2524  cell envelope-related transcriptional attenuator  34.85 
 
 
492 aa  149  6e-35  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011726  PCC8801_1109  cell envelope-related transcriptional attenuator  35.83 
 
 
481 aa  149  8e-35  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1138  cell envelope-related transcriptional attenuator  35.83 
 
 
481 aa  149  9e-35  Cyanothece sp. PCC 8802  Bacteria  normal  0.441684  normal 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  33.68 
 
 
453 aa  147  4.0000000000000006e-34  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_011884  Cyan7425_3856  cell envelope-related transcriptional attenuator  33.12 
 
 
451 aa  145  2e-33  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  33.78 
 
 
403 aa  144  2e-33  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_011729  PCC7424_2953  cell envelope-related transcriptional attenuator  36.69 
 
 
502 aa  144  3e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.873931 
 
 
-
 
NC_009012  Cthe_3102  cell envelope-related transcriptional attenuator  36 
 
 
311 aa  143  5e-33  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0411  cell envelope-like transcriptional attenuator  34.03 
 
 
472 aa  139  6e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.207765 
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  35.65 
 
 
377 aa  139  1e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  35.65 
 
 
374 aa  139  1e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  35.65 
 
 
372 aa  139  1e-31  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  32.94 
 
 
383 aa  136  6.0000000000000005e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  34.78 
 
 
377 aa  136  7.000000000000001e-31  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1857  cell envelope-related transcriptional attenuator  33.75 
 
 
456 aa  136  7.000000000000001e-31  Trichodesmium erythraeum IMS101  Bacteria  normal  0.046941  normal 
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  34.78 
 
 
375 aa  135  9.999999999999999e-31  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  34.78 
 
 
375 aa  135  9.999999999999999e-31  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  34.78 
 
 
375 aa  135  9.999999999999999e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  34.78 
 
 
375 aa  135  9.999999999999999e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  34.78 
 
 
375 aa  135  9.999999999999999e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1572  cell envelope-related transcriptional attenuator  36.22 
 
 
384 aa  135  9.999999999999999e-31  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.0072424  normal  0.757675 
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  39.51 
 
 
329 aa  134  1.9999999999999998e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  34.39 
 
 
374 aa  133  5e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4695  transcription antiterminator, LytR family  32.94 
 
 
338 aa  133  6e-30  Bacillus cereus G9842  Bacteria  normal  0.541641  hitchhiker  0.0000000308245 
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  32.28 
 
 
337 aa  132  1.0000000000000001e-29  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  38.54 
 
 
333 aa  132  1.0000000000000001e-29  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  32.94 
 
 
337 aa  132  1.0000000000000001e-29  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  38.54 
 
 
333 aa  132  1.0000000000000001e-29  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  38.54 
 
 
333 aa  132  1.0000000000000001e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  38.54 
 
 
335 aa  132  1.0000000000000001e-29  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  32.94 
 
 
333 aa  132  1.0000000000000001e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  38.54 
 
 
333 aa  132  1.0000000000000001e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  32.68 
 
 
436 aa  132  1.0000000000000001e-29  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  38.54 
 
 
333 aa  132  1.0000000000000001e-29  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  32.94 
 
 
338 aa  132  1.0000000000000001e-29  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  36.29 
 
 
333 aa  132  1.0000000000000001e-29  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  32.54 
 
 
338 aa  132  2.0000000000000002e-29  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0643  transcription antiterminator, LytR family  32.54 
 
 
338 aa  130  3e-29  Bacillus cereus B4264  Bacteria  normal  0.849345  n/a   
 
 
-
 
NC_005957  BT9727_0516  LytR family transcriptional regulator  32.54 
 
 
337 aa  130  4.0000000000000003e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0516  LytR family transcriptional regulator  32.54 
 
 
337 aa  130  4.0000000000000003e-29  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2078  transcription antiterminator, LytR family  38.05 
 
 
333 aa  130  4.0000000000000003e-29  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000542577  n/a   
 
 
-
 
NC_011772  BCG9842_B3352  transcription antiterminator, LytR family  37.56 
 
 
335 aa  130  5.0000000000000004e-29  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000199263  hitchhiker  0.0000000000000086496 
 
 
-
 
NC_011725  BCB4264_A1975  transcription antiterminator, LytR family  37.56 
 
 
333 aa  130  6e-29  Bacillus cereus B4264  Bacteria  normal  0.258453  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  32.14 
 
 
338 aa  129  1.0000000000000001e-28  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  33.47 
 
 
322 aa  128  2.0000000000000002e-28  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_008262  CPR_2090  transcription regulator LytR-like protein  33.81 
 
 
437 aa  127  3e-28  Clostridium perfringens SM101  Bacteria  normal  0.853394  n/a   
 
 
-
 
NC_009012  Cthe_0727  cell envelope-related transcriptional attenuator  33.33 
 
 
308 aa  127  3e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0775994  n/a   
 
 
-
 
NC_008261  CPF_2378  cell envelope-related function transcriptional attenuator  33.45 
 
 
437 aa  127  4.0000000000000003e-28  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0983623  n/a   
 
 
-
 
NC_012034  Athe_1244  cell envelope-related transcriptional attenuator  29.38 
 
 
445 aa  127  5e-28  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000703915  n/a   
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  33.47 
 
 
337 aa  125  1e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0152  cell envelope-related transcriptional attenuator  39.57 
 
 
271 aa  125  1e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  35.51 
 
 
407 aa  125  2e-27  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  29.75 
 
 
335 aa  123  5e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  32.35 
 
 
317 aa  122  8e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2282  cell envelope-related transcriptional attenuator  30.31 
 
 
389 aa  119  7.999999999999999e-26  Meiothermus ruber DSM 1279  Bacteria  normal  0.072814  hitchhiker  0.000000103578 
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  32.68 
 
 
299 aa  118  9.999999999999999e-26  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1005  cell envelope-related transcriptional attenuator  31.52 
 
 
285 aa  119  9.999999999999999e-26  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_1762  cell envelope-like transcriptional attenuator  31.91 
 
 
501 aa  117  3e-25  'Nostoc azollae' 0708  Bacteria  normal  0.103676  n/a   
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  31.32 
 
 
304 aa  115  8.999999999999998e-25  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  32.54 
 
 
491 aa  116  8.999999999999998e-25  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  31.17 
 
 
390 aa  115  1.0000000000000001e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5058  membrane-bound transcriptional regulator LytR  33.33 
 
 
304 aa  115  1.0000000000000001e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5436  membrane-bound transcriptional regulator LytR  33.08 
 
 
302 aa  115  1.0000000000000001e-24  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  32.82 
 
 
302 aa  115  2.0000000000000002e-24  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  30.94 
 
 
304 aa  115  2.0000000000000002e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  36.53 
 
 
356 aa  114  2.0000000000000002e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_006274  BCZK4961  membrane-bound transcriptional regulator LytR  32.39 
 
 
303 aa  114  3e-24  Bacillus cereus E33L  Bacteria  normal  0.0205697  n/a   
 
 
-
 
NC_005945  BAS5115  membrane-bound transcriptional regulator LytR  32.39 
 
 
303 aa  114  4.0000000000000004e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5506  membrane-bound transcriptional regulator LytR  32.39 
 
 
303 aa  114  4.0000000000000004e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00691653  n/a   
 
 
-
 
NC_007604  Synpcc7942_0961  cell envelope-related function transcriptional attenuator  31.6 
 
 
337 aa  113  6e-24  Synechococcus elongatus PCC 7942  Bacteria  normal  0.472241  normal 
 
 
-
 
NC_011773  BCAH820_5355  membrane-bound transcriptional regulator LytR  31.32 
 
 
303 aa  113  7.000000000000001e-24  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  30.04 
 
 
509 aa  112  1.0000000000000001e-23  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  29.27 
 
 
505 aa  112  1.0000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  36.07 
 
 
353 aa  112  1.0000000000000001e-23  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  29.62 
 
 
504 aa  111  2.0000000000000002e-23  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_010320  Teth514_2233  cell envelope-related transcriptional attenuator  31.85 
 
 
303 aa  111  2.0000000000000002e-23  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1876  cell envelope-related transcriptional attenuator  32.17 
 
 
455 aa  110  3e-23  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000275813  normal 
 
 
-
 
NC_009632  SaurJH1_1451  transcription attenuator LytR  34.38 
 
 
327 aa  111  3e-23  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3796  membrane-bound transcriptional regulator LytR  30.62 
 
 
302 aa  111  3e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.0000323774  n/a   
 
 
-
 
NC_008530  LGAS_1715  transcriptional regulator  32.2 
 
 
374 aa  111  3e-23  Lactobacillus gasseri ATCC 33323  Bacteria  normal  hitchhiker  0.00565214 
 
 
-
 
NC_009487  SaurJH9_1423  cell envelope-related transcriptional attenuator  34.38 
 
 
327 aa  111  3e-23  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.302612  n/a   
 
 
-
 
NC_013171  Apre_0189  cell envelope-related transcriptional attenuator  30.03 
 
 
403 aa  110  4.0000000000000004e-23  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>