| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2090 |
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| Symbol | |
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| ID | 4205162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2318323 |
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| End bp | 2319636 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642566640 |
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| Product | transcription regulator LytR-like protein |
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| Protein accession | YP_699399 |
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| Protein GI | 110802034 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.853394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGGAATG AAGAAAATAG ATTTGAAAAA AGACAAGATA AGAAAAATAT AAATAAAAAA
AGCTTGATAA AAAGAATAAT TTTAGGTGCT TTAGCTTTTA TTCTTATTTT TTTTATAAGT
ATTTTTGGAT ATTTTTATTT TAAATATGGC AGTTTTTTAG GAGAAGTTTT TAATATAGTT
AAAGACGTAA AACAGGATGT AATAAAGGTT GAAGAGCCAA TTAATGTACT CTTATTAGGA
ATGGATATTG GTGATACAAG TGATGTATCA AATAAAGATG CTAAAAGAAC AGACACTATA
ATTCTAGCAA ACTTTGATCC TATAACAAAA GAGGCTAAGT TAATATCTAT ACCTAGAGAT
ACTAGAGTAA AAATTGGAGG AAAGTCTCAA AAAATAAATG CTGCCTACCC AATTGGGGGA
GAAAAGCTTG TTAAACAGCT TGTTGGAAAT ATATTAGGGG TTAAGGTTGA TTATGTTGTT
AAAGTTGATT ATGAAGGCTT TAGAGGCATA ATAGATGCCA TTGGTGGAAT TGACATGTAT
ATAGAGCAGG ATATGAACTA TGACGATCCA GGGCAGGATT TACACATACA TTTCAACAAG
GGAGAAACTG TACACTTAGA TGGTAAAAAA GCTGAAGAGT TTTTTAGGTG GAGAAAAAAT
AATGATGGTA CAGGATTAGC TAATGGGGAT ATTGATAGAA TAAAAAATCA ACAAAAGTTT
ATGAATGCTG TAATAGATAA GGTTTTATCA GTATCTACTA TAACAAAGAT AGATAGTATA
GCAGAGATTT TAAATAAAAA TATAGAAACT AATATTCCTT TAGATGTTAC TGTTGCATAT
GGACTTAAAG GATTAGAAGC TGATAAGAAT AATATAAAAA TGATGACTTT ACCTGGAGAA
GGTAAATATG TTGGAAATGT TTCTTATTAT ATTCTAGATG AAAAGGCTAC TAAAGAATTA
AAAAGTCAAT TAAACAGTAG TAATTTAAGT GGAAGAAAAA ATGTTATTCC TAGTGCTGCT
AGGGGGGATT TATCCATAAA AGTTTTAAAT TGCACAAAAA TAAATGGCTT AGCTGCAAAT
GTACAAAAAC AATTAAATGA AAACGGATAT GATAAAGTTG ATGTTGGAAA TGGAGATCCA
ATAGAAAAAT CAGAGATTTT GATAAAGGAT GAAAGTTCTA GAGCTTTTAT GGAAAATGAT
TTAAAGATAG ATAATATTAA AAAGGGTATT TCATCTAAGT ATGATGGAAA TGAAACTTAT
GATGTAGTAA TATTATTAGG AAAAGACTTT AAAAATTTCG GAGAGATGAA ATGA
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| Protein sequence | MGNEENRFEK RQDKKNINKK SLIKRIILGA LAFILIFFIS IFGYFYFKYG SFLGEVFNIV
KDVKQDVIKV EEPINVLLLG MDIGDTSDVS NKDAKRTDTI ILANFDPITK EAKLISIPRD
TRVKIGGKSQ KINAAYPIGG EKLVKQLVGN ILGVKVDYVV KVDYEGFRGI IDAIGGIDMY
IEQDMNYDDP GQDLHIHFNK GETVHLDGKK AEEFFRWRKN NDGTGLANGD IDRIKNQQKF
MNAVIDKVLS VSTITKIDSI AEILNKNIET NIPLDVTVAY GLKGLEADKN NIKMMTLPGE
GKYVGNVSYY ILDEKATKEL KSQLNSSNLS GRKNVIPSAA RGDLSIKVLN CTKINGLAAN
VQKQLNENGY DKVDVGNGDP IEKSEILIKD ESSRAFMEND LKIDNIKKGI SSKYDGNETY
DVVILLGKDF KNFGEMK
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