More than 300 homologs were found in PanDaTox collection
for query gene CPR_2090 on replicon NC_008262
Organism: Clostridium perfringens SM101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008261  CPF_2378  cell envelope-related function transcriptional attenuator  97.71 
 
 
437 aa  799    Clostridium perfringens ATCC 13124  Bacteria  normal  0.0983623  n/a   
 
 
-
 
NC_008262  CPR_2090  transcription regulator LytR-like protein  100 
 
 
437 aa  866    Clostridium perfringens SM101  Bacteria  normal  0.853394  n/a   
 
 
-
 
NC_009012  Cthe_3102  cell envelope-related transcriptional attenuator  45.24 
 
 
311 aa  192  1e-47  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  34.19 
 
 
403 aa  186  9e-46  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_009012  Cthe_0727  cell envelope-related transcriptional attenuator  35.43 
 
 
308 aa  180  4e-44  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0775994  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  36.91 
 
 
405 aa  180  4e-44  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_011726  PCC8801_1109  cell envelope-related transcriptional attenuator  29.35 
 
 
481 aa  163  6e-39  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1138  cell envelope-related transcriptional attenuator  29.35 
 
 
481 aa  163  6e-39  Cyanothece sp. PCC 8802  Bacteria  normal  0.441684  normal 
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  30.52 
 
 
436 aa  161  2e-38  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  34.53 
 
 
383 aa  159  6e-38  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  38.52 
 
 
319 aa  159  1e-37  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  35.84 
 
 
445 aa  155  9e-37  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_011729  PCC7424_2873  cell envelope-related transcriptional attenuator  29.62 
 
 
475 aa  154  2.9999999999999998e-36  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  34.95 
 
 
414 aa  154  4e-36  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3223  cell envelope-like transcriptional attenuator  30.13 
 
 
471 aa  153  7e-36  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  33.55 
 
 
453 aa  152  1e-35  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_007413  Ava_0411  cell envelope-like transcriptional attenuator  29.38 
 
 
472 aa  147  5e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.207765 
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  31.4 
 
 
377 aa  143  6e-33  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  31.06 
 
 
377 aa  142  9.999999999999999e-33  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  33.55 
 
 
406 aa  142  9.999999999999999e-33  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  31.31 
 
 
374 aa  142  9.999999999999999e-33  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2953  cell envelope-related transcriptional attenuator  33.73 
 
 
502 aa  142  9.999999999999999e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.873931 
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  31.4 
 
 
375 aa  141  1.9999999999999998e-32  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  33.86 
 
 
411 aa  141  1.9999999999999998e-32  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  31.4 
 
 
375 aa  141  3e-32  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  31.4 
 
 
375 aa  141  3e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  31.4 
 
 
375 aa  141  3e-32  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  31.4 
 
 
375 aa  141  3e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1857  cell envelope-related transcriptional attenuator  30.34 
 
 
456 aa  140  3e-32  Trichodesmium erythraeum IMS101  Bacteria  normal  0.046941  normal 
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  31.31 
 
 
372 aa  140  4.999999999999999e-32  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_013161  Cyan8802_3582  cell envelope-related transcriptional attenuator  33.6 
 
 
492 aa  139  7e-32  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  32.93 
 
 
333 aa  139  1e-31  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  33.47 
 
 
344 aa  138  1e-31  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_011726  PCC8801_2524  cell envelope-related transcriptional attenuator  33.2 
 
 
492 aa  138  2e-31  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  32.87 
 
 
374 aa  138  2e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  32.67 
 
 
419 aa  137  4e-31  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_011772  BCG9842_B3352  transcription antiterminator, LytR family  34.92 
 
 
335 aa  137  5e-31  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000199263  hitchhiker  0.0000000000000086496 
 
 
-
 
NC_011725  BCB4264_A1975  transcription antiterminator, LytR family  33.87 
 
 
333 aa  137  5e-31  Bacillus cereus B4264  Bacteria  normal  0.258453  n/a   
 
 
-
 
NC_008530  LGAS_0174  transcriptional regulator  31.09 
 
 
374 aa  135  9.999999999999999e-31  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.0565386  hitchhiker  0.0000000000000158467 
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  33.55 
 
 
333 aa  135  1.9999999999999998e-30  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_011658  BCAH187_A2078  transcription antiterminator, LytR family  33.23 
 
 
333 aa  133  5e-30  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000542577  n/a   
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  32.9 
 
 
333 aa  132  1.0000000000000001e-29  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  32.9 
 
 
333 aa  132  1.0000000000000001e-29  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  32.9 
 
 
333 aa  132  1.0000000000000001e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  32.9 
 
 
335 aa  132  1.0000000000000001e-29  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  32.9 
 
 
333 aa  132  1.0000000000000001e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  26.59 
 
 
495 aa  132  1.0000000000000001e-29  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2090  cell envelope-related transcriptional attenuator  27.81 
 
 
417 aa  132  1.0000000000000001e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS5115  membrane-bound transcriptional regulator LytR  31.45 
 
 
303 aa  131  2.0000000000000002e-29  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5506  membrane-bound transcriptional regulator LytR  31.45 
 
 
303 aa  131  2.0000000000000002e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00691653  n/a   
 
 
-
 
NC_006274  BCZK4961  membrane-bound transcriptional regulator LytR  31.45 
 
 
303 aa  131  3e-29  Bacillus cereus E33L  Bacteria  normal  0.0205697  n/a   
 
 
-
 
NC_008312  Tery_2604  cell envelope-related transcriptional attenuator  31.72 
 
 
471 aa  130  3e-29  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.22991 
 
 
-
 
NC_011884  Cyan7425_3856  cell envelope-related transcriptional attenuator  28.21 
 
 
451 aa  131  3e-29  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP1893  transcriptional regulator, putative  29.31 
 
 
316 aa  130  4.0000000000000003e-29  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  34.31 
 
 
390 aa  130  5.0000000000000004e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  26.68 
 
 
512 aa  130  5.0000000000000004e-29  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_014212  Mesil_1572  cell envelope-related transcriptional attenuator  32.05 
 
 
384 aa  129  1.0000000000000001e-28  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.0072424  normal  0.757675 
 
 
-
 
NC_008530  LGAS_1715  transcriptional regulator  27.62 
 
 
374 aa  129  1.0000000000000001e-28  Lactobacillus gasseri ATCC 33323  Bacteria  normal  hitchhiker  0.00565214 
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  29.05 
 
 
490 aa  129  2.0000000000000002e-28  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  31.97 
 
 
299 aa  128  2.0000000000000002e-28  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5355  membrane-bound transcriptional regulator LytR  31.45 
 
 
303 aa  128  2.0000000000000002e-28  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  30.35 
 
 
302 aa  127  3e-28  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  31.19 
 
 
308 aa  127  4.0000000000000003e-28  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_011658  BCAH187_A5436  membrane-bound transcriptional regulator LytR  31.74 
 
 
302 aa  125  1e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  31.75 
 
 
380 aa  125  1e-27  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  27.45 
 
 
468 aa  125  1e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  32.6 
 
 
418 aa  125  2e-27  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_009674  Bcer98_3796  membrane-bound transcriptional regulator LytR  31.97 
 
 
302 aa  125  2e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.0000323774  n/a   
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  25.89 
 
 
478 aa  124  3e-27  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5058  membrane-bound transcriptional regulator LytR  31.19 
 
 
304 aa  124  3e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  29.32 
 
 
310 aa  124  4e-27  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_011898  Ccel_0666  cell envelope-related transcriptional attenuator  32.32 
 
 
377 aa  124  4e-27  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  27.59 
 
 
480 aa  121  1.9999999999999998e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_008025  Dgeo_1232  cell envelope-related transcriptional attenuator  28.49 
 
 
377 aa  122  1.9999999999999998e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.113674  normal 
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  27.46 
 
 
443 aa  121  1.9999999999999998e-26  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  31.07 
 
 
338 aa  121  1.9999999999999998e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  28.25 
 
 
304 aa  121  3e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_009012  Cthe_0861  cell envelope-related transcriptional attenuator  34.51 
 
 
378 aa  121  3e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3385  membrane-bound transcriptional regulator LytR  28.44 
 
 
313 aa  120  4.9999999999999996e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  34.23 
 
 
338 aa  120  6e-26  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  34.23 
 
 
337 aa  120  6e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  34.23 
 
 
333 aa  120  6e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  31.11 
 
 
322 aa  120  7e-26  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_009972  Haur_1198  cell envelope-related transcriptional attenuator  29.91 
 
 
585 aa  119  7e-26  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  30.89 
 
 
304 aa  120  7e-26  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  34.9 
 
 
426 aa  119  9e-26  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  32.95 
 
 
338 aa  119  9.999999999999999e-26  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  26.14 
 
 
520 aa  119  9.999999999999999e-26  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_014248  Aazo_1762  cell envelope-like transcriptional attenuator  25.27 
 
 
501 aa  119  9.999999999999999e-26  'Nostoc azollae' 0708  Bacteria  normal  0.103676  n/a   
 
 
-
 
NC_011772  BCG9842_B4695  transcription antiterminator, LytR family  32.95 
 
 
338 aa  119  9.999999999999999e-26  Bacillus cereus G9842  Bacteria  normal  0.541641  hitchhiker  0.0000000308245 
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  32.56 
 
 
337 aa  118  1.9999999999999998e-25  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0516  LytR family transcriptional regulator  33.85 
 
 
337 aa  118  1.9999999999999998e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0516  LytR family transcriptional regulator  33.85 
 
 
337 aa  118  1.9999999999999998e-25  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  30.4 
 
 
563 aa  118  3e-25  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  27.65 
 
 
335 aa  117  3e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A0643  transcription antiterminator, LytR family  32.95 
 
 
338 aa  118  3e-25  Bacillus cereus B4264  Bacteria  normal  0.849345  n/a   
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  31.77 
 
 
329 aa  117  3e-25  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  28.7 
 
 
337 aa  116  6.9999999999999995e-25  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2334  cell envelope-related transcriptional attenuator  29.81 
 
 
318 aa  115  1.0000000000000001e-24  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.591324  n/a   
 
 
-
 
NC_009632  SaurJH1_2377  transcription attenuator LytR  29.81 
 
 
318 aa  115  1.0000000000000001e-24  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
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