More than 300 homologs were found in PanDaTox collection
for query gene Cyan7425_3856 on replicon NC_011884
Organism: Cyanothece sp. PCC 7425



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011884  Cyan7425_3856  cell envelope-related transcriptional attenuator  100 
 
 
451 aa  920    Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2524  cell envelope-related transcriptional attenuator  48.46 
 
 
492 aa  421  1e-117  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_2953  cell envelope-related transcriptional attenuator  50.11 
 
 
502 aa  424  1e-117  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.873931 
 
 
-
 
NC_013161  Cyan8802_3582  cell envelope-related transcriptional attenuator  48.46 
 
 
492 aa  421  1e-116  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1857  cell envelope-related transcriptional attenuator  49.76 
 
 
456 aa  397  1e-109  Trichodesmium erythraeum IMS101  Bacteria  normal  0.046941  normal 
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  51.92 
 
 
436 aa  371  1e-101  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2679  cell envelope-like transcriptional attenuator  43.36 
 
 
503 aa  326  5e-88  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0411  cell envelope-like transcriptional attenuator  39.56 
 
 
472 aa  320  3.9999999999999996e-86  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.207765 
 
 
-
 
NC_014248  Aazo_1762  cell envelope-like transcriptional attenuator  40.1 
 
 
501 aa  320  5e-86  'Nostoc azollae' 0708  Bacteria  normal  0.103676  n/a   
 
 
-
 
NC_011729  PCC7424_2873  cell envelope-related transcriptional attenuator  40.09 
 
 
475 aa  309  5.9999999999999995e-83  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013161  Cyan8802_1138  cell envelope-related transcriptional attenuator  38.3 
 
 
481 aa  303  5.000000000000001e-81  Cyanothece sp. PCC 8802  Bacteria  normal  0.441684  normal 
 
 
-
 
NC_011726  PCC8801_1109  cell envelope-related transcriptional attenuator  38.3 
 
 
481 aa  303  5.000000000000001e-81  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_014248  Aazo_3223  cell envelope-like transcriptional attenuator  38.38 
 
 
471 aa  300  3e-80  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_2604  cell envelope-related transcriptional attenuator  35.33 
 
 
471 aa  277  2e-73  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.22991 
 
 
-
 
NC_007604  Synpcc7942_0961  cell envelope-related function transcriptional attenuator  44.94 
 
 
337 aa  229  8e-59  Synechococcus elongatus PCC 7942  Bacteria  normal  0.472241  normal 
 
 
-
 
NC_013946  Mrub_2282  cell envelope-related transcriptional attenuator  38.15 
 
 
389 aa  204  3e-51  Meiothermus ruber DSM 1279  Bacteria  normal  0.072814  hitchhiker  0.000000103578 
 
 
-
 
NC_008025  Dgeo_1232  cell envelope-related transcriptional attenuator  37.54 
 
 
377 aa  202  9.999999999999999e-51  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.113674  normal 
 
 
-
 
NC_014212  Mesil_1572  cell envelope-related transcriptional attenuator  39.55 
 
 
384 aa  201  3e-50  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.0072424  normal  0.757675 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  39.06 
 
 
419 aa  184  2.0000000000000003e-45  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  32.9 
 
 
308 aa  180  5.999999999999999e-44  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  40.57 
 
 
453 aa  179  9e-44  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  36.15 
 
 
411 aa  177  3e-43  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  33.14 
 
 
414 aa  172  1e-41  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  36.73 
 
 
445 aa  171  3e-41  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  40.74 
 
 
319 aa  170  5e-41  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  29.72 
 
 
405 aa  170  6e-41  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  37.54 
 
 
380 aa  168  2e-40  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  37.01 
 
 
418 aa  150  7e-35  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  33.75 
 
 
403 aa  147  4.0000000000000006e-34  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  33.12 
 
 
406 aa  144  3e-33  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  33.33 
 
 
426 aa  143  6e-33  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_009012  Cthe_0727  cell envelope-related transcriptional attenuator  33.21 
 
 
308 aa  141  3e-32  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0775994  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  35.87 
 
 
377 aa  140  3.9999999999999997e-32  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1875  cell envelope-related transcriptional attenuator  36.33 
 
 
344 aa  140  3.9999999999999997e-32  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2090  cell envelope-related transcriptional attenuator  31.49 
 
 
417 aa  139  7.999999999999999e-32  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  35.14 
 
 
377 aa  138  2e-31  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  35.14 
 
 
375 aa  137  3.0000000000000003e-31  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  35.14 
 
 
375 aa  137  3.0000000000000003e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  35.14 
 
 
375 aa  137  3.0000000000000003e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  35.14 
 
 
375 aa  137  3.0000000000000003e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  35.14 
 
 
375 aa  137  4e-31  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  35.14 
 
 
374 aa  135  9.999999999999999e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  35.14 
 
 
372 aa  135  1.9999999999999998e-30  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_008820  P9303_09711  membrane bound transcriptional regulator-like protein  32.78 
 
 
298 aa  135  1.9999999999999998e-30  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_007516  Syncc9605_1641  cell envelope-related function transcriptional attenuator  38.42 
 
 
314 aa  134  3e-30  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  35.71 
 
 
374 aa  133  7.999999999999999e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  31.35 
 
 
344 aa  132  1.0000000000000001e-29  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_011830  Dhaf_3430  cell envelope-related transcriptional attenuator  32.07 
 
 
439 aa  131  3e-29  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0225853  n/a   
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  32.53 
 
 
383 aa  131  3e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_3102  cell envelope-related transcriptional attenuator  33.77 
 
 
311 aa  129  1.0000000000000001e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  28.36 
 
 
509 aa  123  8e-27  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2377  transcription attenuator LytR  35.89 
 
 
318 aa  121  3e-26  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2334  cell envelope-related transcriptional attenuator  35.89 
 
 
318 aa  121  3e-26  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.591324  n/a   
 
 
-
 
NC_012034  Athe_1244  cell envelope-related transcriptional attenuator  31.3 
 
 
445 aa  120  4.9999999999999996e-26  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000703915  n/a   
 
 
-
 
NC_008262  CPR_2090  transcription regulator LytR-like protein  27.35 
 
 
437 aa  119  7.999999999999999e-26  Clostridium perfringens SM101  Bacteria  normal  0.853394  n/a   
 
 
-
 
NC_008261  CPF_2378  cell envelope-related function transcriptional attenuator  25.82 
 
 
437 aa  119  9.999999999999999e-26  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0983623  n/a   
 
 
-
 
NC_008148  Rxyl_1540  cell envelope-related transcriptional attenuator  36.13 
 
 
328 aa  118  1.9999999999999998e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.112437  n/a   
 
 
-
 
NC_008532  STER_0378  transcriptional regulator  30.23 
 
 
408 aa  118  3e-25  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0016641  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  35.59 
 
 
333 aa  118  3e-25  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  35.91 
 
 
495 aa  117  3e-25  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  27.31 
 
 
563 aa  117  3.9999999999999997e-25  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  32.16 
 
 
337 aa  116  6e-25  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1005  cell envelope-related transcriptional attenuator  32.46 
 
 
285 aa  116  6.9999999999999995e-25  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  31.27 
 
 
453 aa  116  7.999999999999999e-25  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  36.41 
 
 
490 aa  116  1.0000000000000001e-24  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  35.12 
 
 
310 aa  116  1.0000000000000001e-24  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_011725  BCB4264_A1975  transcription antiterminator, LytR family  35.14 
 
 
333 aa  115  1.0000000000000001e-24  Bacillus cereus B4264  Bacteria  normal  0.258453  n/a   
 
 
-
 
NC_002976  SERP0640  transcriptional regulator, putative  31.34 
 
 
412 aa  115  2.0000000000000002e-24  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.00230389  n/a   
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  35.14 
 
 
333 aa  115  2.0000000000000002e-24  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  35.14 
 
 
333 aa  115  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  35.14 
 
 
333 aa  115  2.0000000000000002e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  35.14 
 
 
335 aa  115  2.0000000000000002e-24  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  35.14 
 
 
333 aa  115  2.0000000000000002e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3385  membrane-bound transcriptional regulator LytR  34.63 
 
 
313 aa  115  2.0000000000000002e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  28.43 
 
 
377 aa  115  2.0000000000000002e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  35.14 
 
 
333 aa  115  2.0000000000000002e-24  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_011772  BCG9842_B3352  transcription antiterminator, LytR family  35.71 
 
 
335 aa  115  2.0000000000000002e-24  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000199263  hitchhiker  0.0000000000000086496 
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  30.71 
 
 
304 aa  114  3e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  27.25 
 
 
497 aa  114  5e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A2078  transcription antiterminator, LytR family  34.68 
 
 
333 aa  113  7.000000000000001e-24  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000542577  n/a   
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  33.49 
 
 
512 aa  113  8.000000000000001e-24  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  34.18 
 
 
443 aa  112  1.0000000000000001e-23  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_011898  Ccel_0666  cell envelope-related transcriptional attenuator  28.74 
 
 
377 aa  112  1.0000000000000001e-23  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  34.76 
 
 
329 aa  112  1.0000000000000001e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  32.86 
 
 
299 aa  111  3e-23  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0838  transcription antiterminator, LytR family  29.82 
 
 
399 aa  110  4.0000000000000004e-23  Bacillus cereus B4264  Bacteria  hitchhiker  0.00382216  n/a   
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  26.74 
 
 
530 aa  110  7.000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  34.96 
 
 
356 aa  110  7.000000000000001e-23  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_011658  BCAH187_A5436  membrane-bound transcriptional regulator LytR  31.52 
 
 
302 aa  109  8.000000000000001e-23  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  32.08 
 
 
302 aa  109  9.000000000000001e-23  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4498  transcription antiterminator, LytR family  29.45 
 
 
399 aa  109  9.000000000000001e-23  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0000000000182536 
 
 
-
 
NC_010184  BcerKBAB4_0694  cell envelope-related transcriptional attenuator  29.45 
 
 
401 aa  109  9.000000000000001e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.12922  n/a   
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  31.07 
 
 
317 aa  109  1e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1893  transcriptional regulator, putative  32.69 
 
 
316 aa  108  2e-22  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0875  LytR family transcription antiterminator  31.46 
 
 
400 aa  108  2e-22  Bacillus cereus ATCC 10987  Bacteria  normal  0.0676567  n/a   
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  33.33 
 
 
353 aa  108  2e-22  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_008148  Rxyl_0152  cell envelope-related transcriptional attenuator  33.6 
 
 
271 aa  108  2e-22  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0946  transcription antiterminator, LytR family  30.57 
 
 
400 aa  108  2e-22  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000012569  n/a   
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  30.82 
 
 
584 aa  108  3e-22  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0680  LytR family transcriptional regulator  29.45 
 
 
398 aa  107  3e-22  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
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