| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0125 |
|---|
| Symbol | |
|---|
| ID | 4282169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 133865 |
|---|
| End bp | 135007 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638137025 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_752851 |
|---|
| Protein GI | 114565697 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1316] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00440963 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAA CGAAATCCTA TCTAAAATAT ATTTTCATAG CCGGACTTAT CTTTGGCGTT
TTTTTTGGCA TTGGCTCCGG TCTGAGCCAT ATACTTTATG CTGACCGGGA TTCCGATCCA
GCAGTGGAAG AGGAAGAAAC GGCAGATAAG CCCAAAGACG GAAAAAGAAC TAAAATACTG
GTCCTGGGGG TAGATGCCCG CCCTGGGGAA ACGAACTCCC GTTCCGACAC TATGATACTG
GTAACCATTG ACCCCCGGTT GGACAAGGCG GCCATCGTTT CCATTCCTCG CGATACCAGG
GTTCAGCTTA AGGGCGGAGC GGTGGACAAA ATCTGTGCTG TCAATTACCT GGGGGGGCCC
AAGTATGCGG TTGAAGTTGT GGAAAAACTG ATGGATACCA AAATAGATTA TTATGTGGAA
ATGAACTTCA AAGGCTTCAA GGAGATAGTA GATACCCTGG GCGGAGTTAC TATCAATGTA
CCCCAGCGCA TGTACAAACC CACTGAGGAT ATTGACCTCT ACCCGGGCAC TCAGAAGCTT
AACGGCAGGC AGGCTCTGGC TTTTGTCCGC TACCGCGATT ATGTTATGGG TGATATACAA
AGGACGGCAG CCCAGCAGGA ATTCCTCAAA GCCCTGGCTG ATGAGATATT AAAACCCAAA
ACCCTGACCA AGCTTCCTAC TCTGGTACGG CAGTTGGATA AACACATGGA TACCGATCTT
AAGAAAAGCG ATATGCTGCG CCTGGCCAGT TGGGCTCCCG GCTTTAGCAC CGATTCTATT
GTAACCCAGA CGCTTCCCGG TTATTTCTAT GATGAATGTG ACGAATACGG CAACCTCATC
TGCAGTTATT GGATTGCCGA TAAGAAGAAC CTTGCCGGCC TGCTGGACAA TATGCTGGCC
GGGGAAACCG TAGCTGTGAT TCAGAGCTCT ACTAACAGCC AGAAAAAGGC GATAGCTACT
AAAAACGATA ATAACAACGA TGAAAAAGAA CATAACGACG GCATATACAG CAATAGGGAT
ATAGAGAGGT CGAAACTGCC CAGTCCCGGC CATGCGGGAA GCTGGAACCC GGCCCCATCT
AATAATAAAC CTGAGACTTC CAATCCCAGC CTGGATCCTA CCGGACCGGC CGGCTATATT
TAA
|
|---|
| Protein sequence | MAKTKSYLKY IFIAGLIFGV FFGIGSGLSH ILYADRDSDP AVEEEETADK PKDGKRTKIL
VLGVDARPGE TNSRSDTMIL VTIDPRLDKA AIVSIPRDTR VQLKGGAVDK ICAVNYLGGP
KYAVEVVEKL MDTKIDYYVE MNFKGFKEIV DTLGGVTINV PQRMYKPTED IDLYPGTQKL
NGRQALAFVR YRDYVMGDIQ RTAAQQEFLK ALADEILKPK TLTKLPTLVR QLDKHMDTDL
KKSDMLRLAS WAPGFSTDSI VTQTLPGYFY DECDEYGNLI CSYWIADKKN LAGLLDNMLA
GETVAVIQSS TNSQKKAIAT KNDNNNDEKE HNDGIYSNRD IERSKLPSPG HAGSWNPAPS
NNKPETSNPS LDPTGPAGYI
|
|---|
| |