More than 300 homologs were found in PanDaTox collection
for query gene Swol_0125 on replicon NC_008346
Organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008346  Swol_0125  putative transcriptional regulator  100 
 
 
380 aa  783    Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  43.97 
 
 
406 aa  239  5.999999999999999e-62  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  39.81 
 
 
419 aa  222  9.999999999999999e-57  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  41.5 
 
 
445 aa  215  9e-55  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  36.91 
 
 
411 aa  214  1.9999999999999998e-54  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  40.54 
 
 
426 aa  195  1e-48  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  43.09 
 
 
319 aa  187  2e-46  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  40.86 
 
 
414 aa  187  4e-46  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  36.33 
 
 
418 aa  171  2e-41  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_011884  Cyan7425_3856  cell envelope-related transcriptional attenuator  37.54 
 
 
451 aa  168  1e-40  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3430  cell envelope-related transcriptional attenuator  36.54 
 
 
439 aa  168  2e-40  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0225853  n/a   
 
 
-
 
NC_013205  Aaci_1875  cell envelope-related transcriptional attenuator  40 
 
 
344 aa  164  3e-39  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1857  cell envelope-related transcriptional attenuator  40.08 
 
 
456 aa  164  3e-39  Trichodesmium erythraeum IMS101  Bacteria  normal  0.046941  normal 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  34.12 
 
 
405 aa  155  1e-36  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  38.43 
 
 
407 aa  154  2e-36  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_007413  Ava_0411  cell envelope-like transcriptional attenuator  35.59 
 
 
472 aa  145  1e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.207765 
 
 
-
 
NC_011729  PCC7424_2873  cell envelope-related transcriptional attenuator  36.52 
 
 
475 aa  145  1e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013161  Cyan8802_3582  cell envelope-related transcriptional attenuator  32.4 
 
 
492 aa  144  3e-33  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  36.33 
 
 
403 aa  144  4e-33  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_011729  PCC7424_2953  cell envelope-related transcriptional attenuator  35.8 
 
 
502 aa  142  7e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.873931 
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  34.82 
 
 
344 aa  141  9.999999999999999e-33  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_011726  PCC8801_2524  cell envelope-related transcriptional attenuator  32.09 
 
 
492 aa  142  9.999999999999999e-33  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_014248  Aazo_3223  cell envelope-like transcriptional attenuator  31.38 
 
 
471 aa  141  1.9999999999999998e-32  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0961  cell envelope-related function transcriptional attenuator  35.27 
 
 
337 aa  141  1.9999999999999998e-32  Synechococcus elongatus PCC 7942  Bacteria  normal  0.472241  normal 
 
 
-
 
NC_007413  Ava_2679  cell envelope-like transcriptional attenuator  31.83 
 
 
503 aa  140  3e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2604  cell envelope-related transcriptional attenuator  35.51 
 
 
471 aa  140  3.9999999999999997e-32  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.22991 
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  37.96 
 
 
436 aa  139  6e-32  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1109  cell envelope-related transcriptional attenuator  33.21 
 
 
481 aa  139  6e-32  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1138  cell envelope-related transcriptional attenuator  33.21 
 
 
481 aa  139  7e-32  Cyanothece sp. PCC 8802  Bacteria  normal  0.441684  normal 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  42.01 
 
 
509 aa  137  4e-31  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_1762  cell envelope-like transcriptional attenuator  31.11 
 
 
501 aa  137  4e-31  'Nostoc azollae' 0708  Bacteria  normal  0.103676  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  34.23 
 
 
377 aa  135  9.999999999999999e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  32.99 
 
 
453 aa  135  9.999999999999999e-31  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  34.63 
 
 
374 aa  135  9.999999999999999e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  33.85 
 
 
375 aa  134  1.9999999999999998e-30  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  32.01 
 
 
308 aa  134  1.9999999999999998e-30  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  36.53 
 
 
374 aa  134  3e-30  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  33.85 
 
 
375 aa  134  3e-30  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  33.85 
 
 
375 aa  134  3e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  33.85 
 
 
375 aa  134  3e-30  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  33.85 
 
 
375 aa  134  3e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  36.53 
 
 
372 aa  133  5e-30  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  37.85 
 
 
497 aa  133  6.999999999999999e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  33.46 
 
 
377 aa  132  1.0000000000000001e-29  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  32.86 
 
 
505 aa  131  2.0000000000000002e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_014212  Mesil_1572  cell envelope-related transcriptional attenuator  35.98 
 
 
384 aa  130  3e-29  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.0072424  normal  0.757675 
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  34.2 
 
 
338 aa  128  2.0000000000000002e-28  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  29.56 
 
 
383 aa  127  3e-28  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0152  cell envelope-related transcriptional attenuator  35.1 
 
 
271 aa  127  3e-28  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  32.64 
 
 
335 aa  126  5e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  34.78 
 
 
337 aa  126  6e-28  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  36.23 
 
 
337 aa  125  1e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0516  LytR family transcriptional regulator  36.23 
 
 
337 aa  125  1e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  36.23 
 
 
333 aa  125  1e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  36.23 
 
 
338 aa  125  1e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_013946  Mrub_2282  cell envelope-related transcriptional attenuator  31.37 
 
 
389 aa  125  1e-27  Meiothermus ruber DSM 1279  Bacteria  normal  0.072814  hitchhiker  0.000000103578 
 
 
-
 
NC_014212  Mesil_2090  cell envelope-related transcriptional attenuator  33.46 
 
 
417 aa  125  2e-27  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  35.64 
 
 
317 aa  124  2e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_3102  cell envelope-related transcriptional attenuator  38.89 
 
 
311 aa  125  2e-27  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1540  cell envelope-related transcriptional attenuator  35.11 
 
 
328 aa  124  3e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.112437  n/a   
 
 
-
 
NC_006274  BCZK0516  LytR family transcriptional regulator  35.75 
 
 
337 aa  123  4e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  34.11 
 
 
490 aa  123  4e-27  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  36.14 
 
 
338 aa  123  5e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  32.71 
 
 
333 aa  122  7e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  32.71 
 
 
333 aa  122  7e-27  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  32.71 
 
 
333 aa  122  7e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  32.71 
 
 
335 aa  122  7e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  32.71 
 
 
333 aa  122  7e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  33.33 
 
 
322 aa  122  8e-27  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  36.14 
 
 
337 aa  122  9.999999999999999e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4695  transcription antiterminator, LytR family  34.02 
 
 
338 aa  122  9.999999999999999e-27  Bacillus cereus G9842  Bacteria  normal  0.541641  hitchhiker  0.0000000308245 
 
 
-
 
NC_008025  Dgeo_1232  cell envelope-related transcriptional attenuator  33.33 
 
 
377 aa  122  9.999999999999999e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.113674  normal 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  35.56 
 
 
504 aa  122  9.999999999999999e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_011725  BCB4264_A0643  transcription antiterminator, LytR family  34.02 
 
 
338 aa  122  9.999999999999999e-27  Bacillus cereus B4264  Bacteria  normal  0.849345  n/a   
 
 
-
 
NC_002976  SERP0640  transcriptional regulator, putative  32.46 
 
 
412 aa  121  1.9999999999999998e-26  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.00230389  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  33.99 
 
 
453 aa  121  1.9999999999999998e-26  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  36.32 
 
 
563 aa  121  1.9999999999999998e-26  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  37.5 
 
 
306 aa  120  3e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  33.21 
 
 
333 aa  120  3.9999999999999996e-26  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  36.51 
 
 
307 aa  120  6e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  37.8 
 
 
495 aa  119  7e-26  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  32.42 
 
 
512 aa  119  9e-26  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_011658  BCAH187_A2078  transcription antiterminator, LytR family  32.83 
 
 
333 aa  118  9.999999999999999e-26  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000542577  n/a   
 
 
-
 
NC_011725  BCB4264_A1975  transcription antiterminator, LytR family  32.83 
 
 
333 aa  118  9.999999999999999e-26  Bacillus cereus B4264  Bacteria  normal  0.258453  n/a   
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  37.17 
 
 
311 aa  119  9.999999999999999e-26  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3352  transcription antiterminator, LytR family  32.83 
 
 
335 aa  118  9.999999999999999e-26  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000199263  hitchhiker  0.0000000000000086496 
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  37.17 
 
 
311 aa  119  9.999999999999999e-26  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  31.97 
 
 
333 aa  119  9.999999999999999e-26  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  37.17 
 
 
311 aa  119  9.999999999999999e-26  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  35.04 
 
 
409 aa  117  1.9999999999999998e-25  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_012034  Athe_1244  cell envelope-related transcriptional attenuator  27.25 
 
 
445 aa  117  3e-25  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000703915  n/a   
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  35.47 
 
 
329 aa  116  5e-25  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  34.7 
 
 
320 aa  116  6e-25  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  36.72 
 
 
390 aa  115  8.999999999999998e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2377  transcription attenuator LytR  34.33 
 
 
318 aa  114  2.0000000000000002e-24  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2334  cell envelope-related transcriptional attenuator  34.33 
 
 
318 aa  114  2.0000000000000002e-24  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.591324  n/a   
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  31.31 
 
 
584 aa  114  2.0000000000000002e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP1893  transcriptional regulator, putative  34.33 
 
 
316 aa  114  3e-24  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  35.48 
 
 
336 aa  114  3e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  29.2 
 
 
353 aa  114  4.0000000000000004e-24  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
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