| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0961 |
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| Symbol | |
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| ID | 3775349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 968937 |
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| End bp | 969950 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637799380 |
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| Product | cell envelope-related function transcriptional attenuator |
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| Protein accession | YP_399978 |
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| Protein GI | 81299770 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.472241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGTC GCTTTTGGAA ACGCAGCCTG CAGCTCACTG CGGTGGGACT TCTGGCCGGT
TGTGTTTGGT TTGGACTCCA GCCATTGCCC CTGCGCAAAG TCAACAACGG CGATCGCCTA
CCAACCGCTT CGAGTCAACC GCTCCTCGGT CTAACGGGTT TACAGCGACC CTTCAGTCTC
TTGATCTTGG GGGTAGATCA AGTGCCTGAC CCCGAAGCTT CGCCCGAGGC GATGTTTCGG
GGCCGCAGCG ACACGATGTT GTTTGTCTAT CTCGACCCAC AACGCGGGCG ATCGCTGGTG
GTATCGCTGC CGCGGGATAC GCGCACGGAA TTGCCGGGCT ATGGCATCGA CAAGATCAAT
GCAGCTAATG TCTACGGCGG TCCCGTCTTG GCGGCTGAGA CCATACAAAG TTTGCTGGGC
AAAGTCACCA TCGATCGCTA CATCCGCGTT GAGCAACGGG CGATCGCGCG GTTTATTGAT
GGCATCGGCG GCCTGACCGT CACAGTGCCA GAGCGAATGC AGTACCGAGA TGTCACCCAA
AACCTGACCA TTGATCTCAA GCCGGGGCAG CAACATCTCT GGGGCGATCG GGCAGTCCAA
TTCCTGCGCT TCCGGCAGGA TGGCTTGGGC GATGTTGGCC GGATTAAACG GCAGCAGGCT
CTAATGAAGG CGCTGCAACA ACAGATTCTG AATCCTCTGG GCATCCTACG GGTGCCGCTT
GGGGTGGCCT TGAGTCAGCC CTATATCGAC AGCAACTTGA GCGGTGCGGA AGTGTTGGCA
ATCACCGCTT TTCTAGCTAG CGGTAAGCCT GTTGAGGTTT CGACCCTGCC GGGACAACCC
AGCGGTAGCA GCTATGCGAT TAGCTATTGG TTGCCGGACT ACAACGCGAT TGATGCTTGG
GTTGCCCAAG AGGTGACGCC ACCCACAGTC TCGAGCAATG GCTGGGACTG GCTCAGAAAT
GAGGTTGGTC GTTTCCTGCC CGTATCCGCA CCGGCTGGAG CAGAAGCAAA CTAA
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| Protein sequence | MARRFWKRSL QLTAVGLLAG CVWFGLQPLP LRKVNNGDRL PTASSQPLLG LTGLQRPFSL
LILGVDQVPD PEASPEAMFR GRSDTMLFVY LDPQRGRSLV VSLPRDTRTE LPGYGIDKIN
AANVYGGPVL AAETIQSLLG KVTIDRYIRV EQRAIARFID GIGGLTVTVP ERMQYRDVTQ
NLTIDLKPGQ QHLWGDRAVQ FLRFRQDGLG DVGRIKRQQA LMKALQQQIL NPLGILRVPL
GVALSQPYID SNLSGAEVLA ITAFLASGKP VEVSTLPGQP SGSSYAISYW LPDYNAIDAW
VAQEVTPPTV SSNGWDWLRN EVGRFLPVSA PAGAEAN
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