| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3582 |
|---|
| Symbol | |
|---|
| ID | 8392923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 3647513 |
|---|
| End bp | 3648991 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644981513 |
|---|
| Product | cell envelope-related transcriptional attenuator |
|---|
| Protein accession | YP_003139236 |
|---|
| Protein GI | 257061348 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1316] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATA GTTGGGAAAG AATAGTGACC GGTTCTGGCC TTGAAGTCAA CCCAGTCCCT
AAGAAATCGG CAAAATCAAG TAAACATACC TCTAAAGTAG GAAATAAACA ACCATTACAG
AGCATTTCTC CCTTTTATCG AGGACTATTG TGGGGTATCA CCTTTAGCTG TACGGCTGCC
CTATCGGCCA CAGTGGGGGC AAGCATTACT CTCTTAAGCC CTCTTTCGCA CAATTTAGTC
CCCCTGATTG AACAGACCAA AACCTGGGGA CAAGCGGCGA TCGCCCTCTC CCAAGACAAC
CAAACCCAAG CAGCCAGTAC ACTCCTCAAG TACCGTTTGT CTCGTCCGGT TAATGTCCTG
GTTTTAGGCA TTGATCGAGT TCCTGATGCT CAACCTGGAA GTTTAGAAGC CTTTGCTGGT
CGTAGCGATA CTATGCTACT GTTACGCTTC GATCCGACTG AAAATTCCGT ACAGATGTTA
TCCATCCCTA GGGATAGTCG GGTCGAGATT CCAGGGGTCG GCTATACCAA GATTAATGAT
GCTAACATTC ACGGTGGTCC TGCCTTAGCG GCAAGGGTCA TCAGTAAAAC CCTCAATGAT
GTTCCCATTG ATCGCTATGT TCGAGTCACG GCTGATGCCT TCACCGAATT AGTGGATTTA
GTCGGTGGTG TGGAAGTCGT TGTCCCCCAT GCCATGGAAT ACGAAGATAA AACCCAAAAA
CTCAAGATTA ACCTAGAAGC AGGACGACAA ATTCTCACAG GAGAACAAGC CGAACAATTT
GCCCGTTTTC GCAAGGATGG TTATGGGGAT ATTGGACGGG TACAACGGCA GCAAGTTCTG
CTAAAAGCCT TACAGCAACG CATTTATAGC CCCACTATTC TGCCGAAAAT TCCCCAAGCT
ATCAGTTTGA TCCAACAAAA CTTAGATACT AATCTAACTT GGGAAGAAAT CTTAGCCTTA
GCCAATTTTG GTCGGGAATT GCAGCGAGAA AACGTCAAAA TGGTCATGTT ACCCGGCCGG
TTTAGTCAAG CCGAAGAATT TGATGCCCGT AGCTATTGGA TACTTTCCCA AAGCGGTATC
GATAAAATTA TGACAGAGTA TTTCAATATT GCTCCTAAAA TTGAATCCTA TCGCCATCTT
TCTCCCAACC GTGTCAGAAT TGCCCTACAA AATGCCACTG ATGATCCCAG TTTAGGTCGT
CGGATGGCAG AATATCTCGC TAAGCAAAAC TTCCACAATG TCTATATTAT TCAAGACGCG
CCCCAACTCC AGCAAGAAAC GGAAATTGTC GTCCAACAGG GAGATTTACA AGCAGCCCAA
AACTTGCAAA CCCTCATGGG GATAGGTAGA GTAGAAGCAT CCTCCACAGG AGATTTAGAT
TCTCAACTTA CCTTGCGTAT TGGTTTAGAT GCTAAGGATC TCGTCTTAGA GGATAGCTTT
CTTAAAGAAT CGAGTCCTTC GGTTGATTCA AATCTATGA
|
|---|
| Protein sequence | MANSWERIVT GSGLEVNPVP KKSAKSSKHT SKVGNKQPLQ SISPFYRGLL WGITFSCTAA
LSATVGASIT LLSPLSHNLV PLIEQTKTWG QAAIALSQDN QTQAASTLLK YRLSRPVNVL
VLGIDRVPDA QPGSLEAFAG RSDTMLLLRF DPTENSVQML SIPRDSRVEI PGVGYTKIND
ANIHGGPALA ARVISKTLND VPIDRYVRVT ADAFTELVDL VGGVEVVVPH AMEYEDKTQK
LKINLEAGRQ ILTGEQAEQF ARFRKDGYGD IGRVQRQQVL LKALQQRIYS PTILPKIPQA
ISLIQQNLDT NLTWEEILAL ANFGRELQRE NVKMVMLPGR FSQAEEFDAR SYWILSQSGI
DKIMTEYFNI APKIESYRHL SPNRVRIALQ NATDDPSLGR RMAEYLAKQN FHNVYIIQDA
PQLQQETEIV VQQGDLQAAQ NLQTLMGIGR VEASSTGDLD SQLTLRIGLD AKDLVLEDSF
LKESSPSVDS NL
|
|---|
| |