More than 300 homologs were found in PanDaTox collection
for query gene RoseRS_0131 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  100 
 
 
353 aa  701    Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  85.67 
 
 
356 aa  618  1e-176  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_011831  Cagg_3226  cell envelope-related transcriptional attenuator  50.54 
 
 
370 aa  317  2e-85  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.501586 
 
 
-
 
NC_009523  RoseRS_4519  cell envelope-related transcriptional attenuator  40.13 
 
 
505 aa  205  9e-52  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0015  cell envelope-related transcriptional attenuator  41.24 
 
 
503 aa  198  1.0000000000000001e-49  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0348648  hitchhiker  0.0000779954 
 
 
-
 
NC_011831  Cagg_1876  cell envelope-related transcriptional attenuator  38.32 
 
 
455 aa  193  4e-48  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000275813  normal 
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  36.25 
 
 
377 aa  171  1e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_0287  cell envelope-related transcriptional attenuator  40.58 
 
 
412 aa  169  9e-41  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4851  cell envelope-related transcriptional attenuator  35.86 
 
 
432 aa  165  8e-40  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1198  cell envelope-related transcriptional attenuator  34.51 
 
 
585 aa  162  1e-38  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0249  cell envelope-related transcriptional attenuator  45.95 
 
 
461 aa  160  2e-38  Roseiflexus sp. RS-1  Bacteria  normal  0.176246  normal  0.0400211 
 
 
-
 
NC_011831  Cagg_3186  cell envelope-related transcriptional attenuator  37.1 
 
 
451 aa  159  1e-37  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.689692 
 
 
-
 
NC_009767  Rcas_1996  cell envelope-related transcriptional attenuator  34.92 
 
 
527 aa  156  5.0000000000000005e-37  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.177975 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  33.83 
 
 
419 aa  142  9.999999999999999e-33  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_009523  RoseRS_1714  cell envelope-related transcriptional attenuator  37.89 
 
 
528 aa  137  3.0000000000000003e-31  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.603952 
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  36.13 
 
 
495 aa  134  1.9999999999999998e-30  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  33.46 
 
 
411 aa  134  1.9999999999999998e-30  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  32.83 
 
 
418 aa  132  1.0000000000000001e-29  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  32.02 
 
 
335 aa  130  3e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  36.05 
 
 
414 aa  130  3e-29  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  36.55 
 
 
512 aa  128  1.0000000000000001e-28  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  37.55 
 
 
445 aa  129  1.0000000000000001e-28  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_011831  Cagg_1700  cell envelope-related transcriptional attenuator  35.78 
 
 
463 aa  125  7e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.55383  normal 
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  34.31 
 
 
426 aa  125  8.000000000000001e-28  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  33.1 
 
 
490 aa  124  2e-27  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  34.18 
 
 
443 aa  124  2e-27  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  30.55 
 
 
375 aa  122  8e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  30.55 
 
 
375 aa  122  8e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  30.74 
 
 
375 aa  122  9e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  30.74 
 
 
375 aa  122  9.999999999999999e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  30.74 
 
 
375 aa  122  9.999999999999999e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  30.74 
 
 
377 aa  122  9.999999999999999e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  30.07 
 
 
374 aa  122  9.999999999999999e-27  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  30.37 
 
 
377 aa  121  1.9999999999999998e-26  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  30.07 
 
 
372 aa  121  1.9999999999999998e-26  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  31.64 
 
 
374 aa  120  3e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  34.22 
 
 
349 aa  120  3.9999999999999996e-26  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  32.13 
 
 
299 aa  118  9.999999999999999e-26  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  30.45 
 
 
304 aa  118  1.9999999999999998e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  28.52 
 
 
344 aa  116  6e-25  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  33.04 
 
 
382 aa  115  8.999999999999998e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  35.41 
 
 
504 aa  115  1.0000000000000001e-24  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  31.19 
 
 
390 aa  115  1.0000000000000001e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  30.77 
 
 
302 aa  115  2.0000000000000002e-24  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  33.33 
 
 
319 aa  114  2.0000000000000002e-24  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  32.56 
 
 
383 aa  114  2.0000000000000002e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  33.65 
 
 
434 aa  113  5e-24  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  29.2 
 
 
380 aa  113  5e-24  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_009674  Bcer98_3796  membrane-bound transcriptional regulator LytR  30.91 
 
 
302 aa  113  5e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.0000323774  n/a   
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  35.32 
 
 
407 aa  112  7.000000000000001e-24  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  36.07 
 
 
406 aa  112  8.000000000000001e-24  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5058  membrane-bound transcriptional regulator LytR  30.32 
 
 
304 aa  112  1.0000000000000001e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5436  membrane-bound transcriptional regulator LytR  30.77 
 
 
302 aa  112  1.0000000000000001e-23  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4498  transcription antiterminator, LytR family  31.02 
 
 
399 aa  111  2.0000000000000002e-23  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0000000000182536 
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  30.52 
 
 
436 aa  111  2.0000000000000002e-23  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0946  transcription antiterminator, LytR family  31.43 
 
 
400 aa  110  3e-23  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000012569  n/a   
 
 
-
 
NC_011725  BCB4264_A0838  transcription antiterminator, LytR family  31.02 
 
 
399 aa  110  3e-23  Bacillus cereus B4264  Bacteria  hitchhiker  0.00382216  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0694  cell envelope-related transcriptional attenuator  31.43 
 
 
401 aa  110  3e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.12922  n/a   
 
 
-
 
NC_009632  SaurJH1_1451  transcription attenuator LytR  33.64 
 
 
327 aa  110  3e-23  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1423  cell envelope-related transcriptional attenuator  33.64 
 
 
327 aa  110  3e-23  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.302612  n/a   
 
 
-
 
NC_002976  SERP0932  transcriptional regulator, putative  31.67 
 
 
329 aa  110  4.0000000000000004e-23  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  35.44 
 
 
320 aa  110  4.0000000000000004e-23  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS5115  membrane-bound transcriptional regulator LytR  30.32 
 
 
303 aa  110  4.0000000000000004e-23  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4961  membrane-bound transcriptional regulator LytR  30.32 
 
 
303 aa  110  4.0000000000000004e-23  Bacillus cereus E33L  Bacteria  normal  0.0205697  n/a   
 
 
-
 
NC_007530  GBAA_5506  membrane-bound transcriptional regulator LytR  30.32 
 
 
303 aa  110  4.0000000000000004e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00691653  n/a   
 
 
-
 
NC_009513  Lreu_1352  cell envelope-related transcriptional attenuator  33.64 
 
 
488 aa  110  4.0000000000000004e-23  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00278352  n/a   
 
 
-
 
NC_006274  BCZK0680  LytR family transcriptional regulator  31.98 
 
 
398 aa  109  7.000000000000001e-23  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  30.82 
 
 
505 aa  109  7.000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_005945  BAS0746  LytR family transcription antiterminator  31.98 
 
 
398 aa  109  8.000000000000001e-23  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0694  LytR family transcriptional regulator  31.98 
 
 
398 aa  109  8.000000000000001e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0354301  n/a   
 
 
-
 
NC_007530  GBAA_0783  LytR family transcription antiterminator  31.98 
 
 
398 aa  109  8.000000000000001e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0878  transcription antiterminator, LytR family  31.98 
 
 
398 aa  109  8.000000000000001e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.78734e-21 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  30.4 
 
 
453 aa  109  9.000000000000001e-23  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_003909  BCE_0875  LytR family transcription antiterminator  31.58 
 
 
400 aa  108  1e-22  Bacillus cereus ATCC 10987  Bacteria  normal  0.0676567  n/a   
 
 
-
 
NC_011884  Cyan7425_3856  cell envelope-related transcriptional attenuator  33.33 
 
 
451 aa  108  1e-22  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  31.16 
 
 
310 aa  108  1e-22  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  29.09 
 
 
304 aa  108  1e-22  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  27.72 
 
 
417 aa  108  2e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_2557  cell envelope-related transcriptional attenuator  30.4 
 
 
263 aa  108  2e-22  Clostridium phytofermentans ISDg  Bacteria  normal  0.0157477  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  28.04 
 
 
506 aa  108  2e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_013739  Cwoe_0921  cell envelope-related transcriptional attenuator  33.65 
 
 
515 aa  108  2e-22  Conexibacter woesei DSM 14684  Bacteria  normal  0.455476  normal 
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  30.5 
 
 
395 aa  107  2e-22  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_0378  transcriptional regulator  29.88 
 
 
408 aa  107  3e-22  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0016641  n/a   
 
 
-
 
NC_013174  Jden_1864  cell envelope-related transcriptional attenuator  27.9 
 
 
391 aa  107  3e-22  Jonesia denitrificans DSM 20603  Bacteria  normal  0.383316  normal  0.036217 
 
 
-
 
NC_011773  BCAH820_5355  membrane-bound transcriptional regulator LytR  29.86 
 
 
303 aa  107  3e-22  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_004116  SAG0632  psr protein  35.12 
 
 
457 aa  107  4e-22  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.513825  n/a   
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  36.41 
 
 
296 aa  107  4e-22  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_26120  cell envelope-related function transcriptional attenuator common domain protein  27.78 
 
 
497 aa  107  4e-22  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  31.96 
 
 
563 aa  106  5e-22  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_009513  Lreu_1057  cell envelope-related transcriptional attenuator  30.29 
 
 
333 aa  106  7e-22  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.0371332  n/a   
 
 
-
 
NC_013411  GYMC61_3385  membrane-bound transcriptional regulator LytR  31.36 
 
 
313 aa  106  8e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_1739  cell envelope-related transcriptional attenuator  34.65 
 
 
302 aa  105  8e-22  Nocardioides sp. JS614  Bacteria  normal  0.140263  n/a   
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  31.69 
 
 
468 aa  105  1e-21  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_5021  cell envelope-related transcriptional attenuator  36.21 
 
 
312 aa  105  1e-21  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00237783 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  29.45 
 
 
521 aa  104  2e-21  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  31.51 
 
 
333 aa  104  2e-21  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0648  cell envelope-related transcriptional attenuator  31.71 
 
 
388 aa  105  2e-21  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.500203  n/a   
 
 
-
 
NC_008312  Tery_1857  cell envelope-related transcriptional attenuator  31.62 
 
 
456 aa  105  2e-21  Trichodesmium erythraeum IMS101  Bacteria  normal  0.046941  normal 
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  36.36 
 
 
303 aa  104  2e-21  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  30.12 
 
 
403 aa  104  2e-21  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
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