More than 300 homologs were found in PanDaTox collection
for query gene RoseRS_4519 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_4519  cell envelope-related transcriptional attenuator  100 
 
 
505 aa  997    Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0015  cell envelope-related transcriptional attenuator  71.91 
 
 
503 aa  664    Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0348648  hitchhiker  0.0000779954 
 
 
-
 
NC_011831  Cagg_1876  cell envelope-related transcriptional attenuator  38.79 
 
 
455 aa  283  4.0000000000000003e-75  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000275813  normal 
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  39.94 
 
 
356 aa  204  4e-51  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  42.59 
 
 
353 aa  201  3e-50  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_009972  Haur_4851  cell envelope-related transcriptional attenuator  45.15 
 
 
432 aa  199  1.0000000000000001e-49  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3226  cell envelope-related transcriptional attenuator  47.64 
 
 
370 aa  197  5.000000000000001e-49  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.501586 
 
 
-
 
NC_009523  RoseRS_0249  cell envelope-related transcriptional attenuator  41.46 
 
 
461 aa  172  1e-41  Roseiflexus sp. RS-1  Bacteria  normal  0.176246  normal  0.0400211 
 
 
-
 
NC_009767  Rcas_0287  cell envelope-related transcriptional attenuator  41.06 
 
 
412 aa  169  1e-40  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1996  cell envelope-related transcriptional attenuator  39.27 
 
 
527 aa  162  1e-38  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.177975 
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  33.43 
 
 
377 aa  161  3e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_1198  cell envelope-related transcriptional attenuator  37.32 
 
 
585 aa  157  3e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3186  cell envelope-related transcriptional attenuator  38.31 
 
 
451 aa  156  7e-37  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.689692 
 
 
-
 
NC_009523  RoseRS_1714  cell envelope-related transcriptional attenuator  45.31 
 
 
528 aa  154  5e-36  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.603952 
 
 
-
 
NC_011831  Cagg_1700  cell envelope-related transcriptional attenuator  42.79 
 
 
463 aa  152  1e-35  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.55383  normal 
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  33.19 
 
 
383 aa  142  1.9999999999999998e-32  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  32.32 
 
 
375 aa  141  3e-32  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  32.32 
 
 
375 aa  141  3e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  32.32 
 
 
375 aa  141  3e-32  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  32.32 
 
 
375 aa  141  3e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  32.32 
 
 
375 aa  141  3e-32  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  31.94 
 
 
377 aa  140  6e-32  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  31.94 
 
 
377 aa  139  8.999999999999999e-32  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  31.56 
 
 
374 aa  136  7.000000000000001e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  31.18 
 
 
372 aa  135  1.9999999999999998e-30  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  31.67 
 
 
374 aa  134  3e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  34.85 
 
 
445 aa  133  6.999999999999999e-30  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  41.71 
 
 
411 aa  129  1.0000000000000001e-28  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  36.4 
 
 
418 aa  128  2.0000000000000002e-28  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  35.29 
 
 
319 aa  129  2.0000000000000002e-28  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  36.77 
 
 
419 aa  127  5e-28  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_011772  BCG9842_B4695  transcription antiterminator, LytR family  35.71 
 
 
338 aa  124  3e-27  Bacillus cereus G9842  Bacteria  normal  0.541641  hitchhiker  0.0000000308245 
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  35.68 
 
 
338 aa  124  3e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0643  transcription antiterminator, LytR family  35.71 
 
 
338 aa  125  3e-27  Bacillus cereus B4264  Bacteria  normal  0.849345  n/a   
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  27.8 
 
 
308 aa  123  7e-27  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  35.71 
 
 
337 aa  122  9.999999999999999e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2233  cell envelope-related transcriptional attenuator  32.42 
 
 
303 aa  122  9.999999999999999e-27  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  35 
 
 
337 aa  122  9.999999999999999e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  35.2 
 
 
338 aa  121  1.9999999999999998e-26  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  34.69 
 
 
337 aa  121  3e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0516  LytR family transcriptional regulator  34.69 
 
 
337 aa  121  3e-26  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  34.69 
 
 
338 aa  121  3e-26  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  34.69 
 
 
333 aa  121  3e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  34.45 
 
 
504 aa  120  4.9999999999999996e-26  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_005957  BT9727_0516  LytR family transcriptional regulator  34.18 
 
 
337 aa  119  9e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  36.75 
 
 
490 aa  119  9.999999999999999e-26  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  37.44 
 
 
407 aa  116  8.999999999999998e-25  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  39.34 
 
 
414 aa  115  1.0000000000000001e-24  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0838  transcription antiterminator, LytR family  28.35 
 
 
399 aa  115  1.0000000000000001e-24  Bacillus cereus B4264  Bacteria  hitchhiker  0.00382216  n/a   
 
 
-
 
NC_011658  BCAH187_A0946  transcription antiterminator, LytR family  28.14 
 
 
400 aa  115  1.0000000000000001e-24  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000012569  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0694  cell envelope-related transcriptional attenuator  27.76 
 
 
401 aa  115  2.0000000000000002e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.12922  n/a   
 
 
-
 
NC_011772  BCG9842_B4498  transcription antiterminator, LytR family  28.52 
 
 
399 aa  114  3e-24  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0000000000182536 
 
 
-
 
NC_003909  BCE_0875  LytR family transcription antiterminator  27.97 
 
 
400 aa  114  5e-24  Bacillus cereus ATCC 10987  Bacteria  normal  0.0676567  n/a   
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  34.93 
 
 
453 aa  113  6e-24  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_009674  Bcer98_0648  cell envelope-related transcriptional attenuator  27.92 
 
 
388 aa  114  6e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.500203  n/a   
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  32.17 
 
 
317 aa  114  6e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  30.83 
 
 
335 aa  113  7.000000000000001e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_005945  BAS0746  LytR family transcription antiterminator  30.18 
 
 
398 aa  112  1.0000000000000001e-23  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0694  LytR family transcriptional regulator  30.18 
 
 
398 aa  112  1.0000000000000001e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0354301  n/a   
 
 
-
 
NC_006274  BCZK0680  LytR family transcriptional regulator  30.18 
 
 
398 aa  112  1.0000000000000001e-23  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0783  LytR family transcription antiterminator  30.18 
 
 
398 aa  112  1.0000000000000001e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1540  cell envelope-related transcriptional attenuator  35.78 
 
 
328 aa  112  1.0000000000000001e-23  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.112437  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  30.83 
 
 
333 aa  113  1.0000000000000001e-23  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  35.96 
 
 
426 aa  113  1.0000000000000001e-23  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  36.22 
 
 
333 aa  112  2.0000000000000002e-23  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_011725  BCB4264_A1975  transcription antiterminator, LytR family  36.76 
 
 
333 aa  112  2.0000000000000002e-23  Bacillus cereus B4264  Bacteria  normal  0.258453  n/a   
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  36.22 
 
 
333 aa  112  2.0000000000000002e-23  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  36.22 
 
 
333 aa  112  2.0000000000000002e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  36.22 
 
 
335 aa  112  2.0000000000000002e-23  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  36.22 
 
 
333 aa  112  2.0000000000000002e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0878  transcription antiterminator, LytR family  30.18 
 
 
398 aa  112  2.0000000000000002e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.78734e-21 
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  36.22 
 
 
333 aa  112  2.0000000000000002e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_011658  BCAH187_A2078  transcription antiterminator, LytR family  36.07 
 
 
333 aa  112  2.0000000000000002e-23  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000542577  n/a   
 
 
-
 
NC_011772  BCG9842_B3352  transcription antiterminator, LytR family  36.76 
 
 
335 aa  112  2.0000000000000002e-23  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000199263  hitchhiker  0.0000000000000086496 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  33.19 
 
 
505 aa  110  4.0000000000000004e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_010184  BcerKBAB4_3273  cell envelope-related transcriptional attenuator  30.56 
 
 
345 aa  110  7.000000000000001e-23  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00000492202  n/a   
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  28.63 
 
 
304 aa  109  9.000000000000001e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_009487  SaurJH9_1115  hypothetical protein  32.06 
 
 
405 aa  109  1e-22  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.108667  n/a   
 
 
-
 
NC_014151  Cfla_2383  cell envelope-related transcriptional attenuator  31.48 
 
 
389 aa  109  1e-22  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0868762  hitchhiker  0.00772059 
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  31.36 
 
 
495 aa  109  1e-22  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_009632  SaurJH1_1138  transcription attenuator LytR  32.06 
 
 
405 aa  109  1e-22  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.195072  n/a   
 
 
-
 
NC_009513  Lreu_1057  cell envelope-related transcriptional attenuator  30.33 
 
 
333 aa  109  1e-22  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.0371332  n/a   
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  30.83 
 
 
329 aa  108  2e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  32.19 
 
 
344 aa  108  2e-22  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  29.07 
 
 
299 aa  108  3e-22  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  31.62 
 
 
405 aa  108  3e-22  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_011830  Dhaf_3430  cell envelope-related transcriptional attenuator  33.03 
 
 
439 aa  108  3e-22  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0225853  n/a   
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  29.3 
 
 
322 aa  108  3e-22  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  30.36 
 
 
443 aa  107  6e-22  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_002976  SERP0640  transcriptional regulator, putative  29.67 
 
 
412 aa  107  7e-22  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.00230389  n/a   
 
 
-
 
NC_002976  SERP0932  transcriptional regulator, putative  31.08 
 
 
329 aa  107  7e-22  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  31.4 
 
 
374 aa  107  7e-22  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  32.86 
 
 
377 aa  106  9e-22  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  31 
 
 
349 aa  106  9e-22  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  29.09 
 
 
302 aa  105  2e-21  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  28.19 
 
 
304 aa  105  2e-21  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_2170  cell envelope-related function transcriptional attenuator  33.5 
 
 
473 aa  105  2e-21  Clostridium perfringens ATCC 13124  Bacteria  normal  0.582429  n/a   
 
 
-
 
NC_013205  Aaci_1875  cell envelope-related transcriptional attenuator  35.23 
 
 
344 aa  103  6e-21  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1881  cell envelope-related function transcriptional attenuator  33.01 
 
 
460 aa  103  1e-20  Clostridium perfringens SM101  Bacteria  normal  0.723477  n/a   
 
 
-
 
NC_013165  Shel_01950  cell envelope-related function transcriptional attenuator common domain protein  32.61 
 
 
516 aa  102  2e-20  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.000132864  normal 
 
 
-
 
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