More than 300 homologs were found in PanDaTox collection
for query gene RoseRS_0249 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_0249  cell envelope-related transcriptional attenuator  100 
 
 
461 aa  901    Roseiflexus sp. RS-1  Bacteria  normal  0.176246  normal  0.0400211 
 
 
-
 
NC_009767  Rcas_0287  cell envelope-related transcriptional attenuator  87.44 
 
 
412 aa  692    Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3186  cell envelope-related transcriptional attenuator  53.04 
 
 
451 aa  419  1e-116  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.689692 
 
 
-
 
NC_009767  Rcas_1996  cell envelope-related transcriptional attenuator  42.54 
 
 
527 aa  257  3e-67  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.177975 
 
 
-
 
NC_011831  Cagg_1700  cell envelope-related transcriptional attenuator  41.25 
 
 
463 aa  243  5e-63  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.55383  normal 
 
 
-
 
NC_009523  RoseRS_1714  cell envelope-related transcriptional attenuator  41.94 
 
 
528 aa  236  7e-61  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.603952 
 
 
-
 
NC_009972  Haur_1198  cell envelope-related transcriptional attenuator  34.1 
 
 
585 aa  186  1.0000000000000001e-45  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0015  cell envelope-related transcriptional attenuator  43.03 
 
 
503 aa  178  2e-43  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0348648  hitchhiker  0.0000779954 
 
 
-
 
NC_009523  RoseRS_4519  cell envelope-related transcriptional attenuator  42.11 
 
 
505 aa  174  3.9999999999999995e-42  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  46.85 
 
 
353 aa  167  2.9999999999999998e-40  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  45.5 
 
 
356 aa  164  3e-39  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_011831  Cagg_3226  cell envelope-related transcriptional attenuator  47.42 
 
 
370 aa  154  2e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.501586 
 
 
-
 
NC_011831  Cagg_1876  cell envelope-related transcriptional attenuator  36.14 
 
 
455 aa  152  8e-36  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000275813  normal 
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  43.44 
 
 
377 aa  142  9.999999999999999e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_4851  cell envelope-related transcriptional attenuator  39.41 
 
 
432 aa  136  8e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  30.73 
 
 
504 aa  134  3e-30  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  29.27 
 
 
495 aa  130  7.000000000000001e-29  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  28.46 
 
 
405 aa  128  2.0000000000000002e-28  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  27.21 
 
 
563 aa  124  5e-27  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_003909  BCE_3605  LytR family transcription antiterminator  26.88 
 
 
345 aa  120  7e-26  Bacillus cereus ATCC 10987  Bacteria  normal  0.0149783  n/a   
 
 
-
 
NC_011658  BCAH187_A3613  transcription antiterminator, LytR family  26.88 
 
 
345 aa  119  9e-26  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000276906  n/a   
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  36.32 
 
 
308 aa  119  9.999999999999999e-26  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_005945  BAS3381  LytR family transcription antiterminator  29.92 
 
 
345 aa  118  1.9999999999999998e-25  Bacillus anthracis str. Sterne  Bacteria  normal  0.288134  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  29.26 
 
 
505 aa  118  1.9999999999999998e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_007530  GBAA_3647  LytR family transcription antiterminator  29.92 
 
 
345 aa  118  1.9999999999999998e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0513784  n/a   
 
 
-
 
NC_011773  BCAH820_3598  transcription antiterminator, LytR family  29.92 
 
 
345 aa  118  1.9999999999999998e-25  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000000156827 
 
 
-
 
NC_005957  BT9727_3347  transcriptional regulator LytR, attenuator for lytABC and lytR expression  27.9 
 
 
345 aa  117  3e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000255205  n/a   
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  27.89 
 
 
521 aa  117  3.9999999999999997e-25  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_006274  BCZK3295  transcriptional regulator LytR, attenuator for lytABC and lytR expression  29.53 
 
 
345 aa  117  3.9999999999999997e-25  Bacillus cereus E33L  Bacteria  normal  0.189328  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  34.68 
 
 
319 aa  117  3.9999999999999997e-25  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  34.41 
 
 
414 aa  115  2.0000000000000002e-24  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A3698  transcription antiterminator, LytR family  29.46 
 
 
345 aa  115  2.0000000000000002e-24  Bacillus cereus B4264  Bacteria  hitchhiker  0.00180581  n/a   
 
 
-
 
NC_011725  BCB4264_A0838  transcription antiterminator, LytR family  30.15 
 
 
399 aa  114  3e-24  Bacillus cereus B4264  Bacteria  hitchhiker  0.00382216  n/a   
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  30.71 
 
 
497 aa  114  4.0000000000000004e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  31.5 
 
 
380 aa  114  4.0000000000000004e-24  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_009674  Bcer98_0648  cell envelope-related transcriptional attenuator  32.47 
 
 
388 aa  113  6e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.500203  n/a   
 
 
-
 
NC_011772  BCG9842_B4498  transcription antiterminator, LytR family  30.55 
 
 
399 aa  113  6e-24  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0000000000182536 
 
 
-
 
NC_011658  BCAH187_A0946  transcription antiterminator, LytR family  31 
 
 
400 aa  113  8.000000000000001e-24  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000012569  n/a   
 
 
-
 
NC_005945  BAS0746  LytR family transcription antiterminator  29.3 
 
 
398 aa  112  1.0000000000000001e-23  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0694  LytR family transcriptional regulator  29.3 
 
 
398 aa  112  1.0000000000000001e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0354301  n/a   
 
 
-
 
NC_007530  GBAA_0783  LytR family transcription antiterminator  29.3 
 
 
398 aa  112  1.0000000000000001e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0878  transcription antiterminator, LytR family  29.3 
 
 
398 aa  112  1.0000000000000001e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.78734e-21 
 
 
-
 
NC_010184  BcerKBAB4_3273  cell envelope-related transcriptional attenuator  30.49 
 
 
345 aa  112  1.0000000000000001e-23  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00000492202  n/a   
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  32.47 
 
 
411 aa  112  1.0000000000000001e-23  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  30.9 
 
 
337 aa  111  2.0000000000000002e-23  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0516  LytR family transcriptional regulator  30.9 
 
 
337 aa  112  2.0000000000000002e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0516  LytR family transcriptional regulator  30.9 
 
 
337 aa  111  2.0000000000000002e-23  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0680  LytR family transcriptional regulator  29.3 
 
 
398 aa  111  2.0000000000000002e-23  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  30.9 
 
 
333 aa  111  2.0000000000000002e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  28.03 
 
 
337 aa  111  2.0000000000000002e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  30.47 
 
 
338 aa  111  2.0000000000000002e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  30.31 
 
 
453 aa  111  3e-23  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_011772  BCG9842_B1619  transcription antiterminator, LytR family  28.68 
 
 
345 aa  111  3e-23  Bacillus cereus G9842  Bacteria  hitchhiker  0.00116574  hitchhiker  0.0000348163 
 
 
-
 
NC_010184  BcerKBAB4_0694  cell envelope-related transcriptional attenuator  29.24 
 
 
401 aa  110  4.0000000000000004e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.12922  n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  33.62 
 
 
419 aa  110  4.0000000000000004e-23  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  29.51 
 
 
490 aa  110  4.0000000000000004e-23  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  29.63 
 
 
337 aa  110  5e-23  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  29.26 
 
 
338 aa  110  5e-23  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  33.84 
 
 
317 aa  110  6e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13519  hypothetical protein  28.41 
 
 
512 aa  110  6e-23  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.100718 
 
 
-
 
NC_011772  BCG9842_B4695  transcription antiterminator, LytR family  29.89 
 
 
338 aa  110  6e-23  Bacillus cereus G9842  Bacteria  normal  0.541641  hitchhiker  0.0000000308245 
 
 
-
 
NC_003909  BCE_0875  LytR family transcription antiterminator  30.87 
 
 
400 aa  110  7.000000000000001e-23  Bacillus cereus ATCC 10987  Bacteria  normal  0.0676567  n/a   
 
 
-
 
NC_011725  BCB4264_A0643  transcription antiterminator, LytR family  29.89 
 
 
338 aa  110  7.000000000000001e-23  Bacillus cereus B4264  Bacteria  normal  0.849345  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  30.47 
 
 
338 aa  110  8.000000000000001e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  32.73 
 
 
426 aa  108  1e-22  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  31.93 
 
 
329 aa  108  1e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  29.01 
 
 
509 aa  108  2e-22  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  36.82 
 
 
407 aa  108  2e-22  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  32.62 
 
 
445 aa  108  2e-22  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  36.18 
 
 
344 aa  108  2e-22  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  36.56 
 
 
335 aa  107  4e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_09180  cell envelope-related function transcriptional attenuator common domain  32.92 
 
 
791 aa  107  4e-22  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  29.8 
 
 
374 aa  107  5e-22  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  30.37 
 
 
418 aa  106  1e-21  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  34.98 
 
 
310 aa  106  1e-21  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  34.95 
 
 
304 aa  105  1e-21  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  32.64 
 
 
383 aa  105  2e-21  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  30.94 
 
 
512 aa  105  2e-21  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  30.58 
 
 
443 aa  105  2e-21  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  31.49 
 
 
420 aa  105  2e-21  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0921  cell envelope-related transcriptional attenuator  32.74 
 
 
515 aa  104  3e-21  Conexibacter woesei DSM 14684  Bacteria  normal  0.455476  normal 
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  29.32 
 
 
522 aa  104  3e-21  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  27.73 
 
 
322 aa  103  5e-21  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  29.78 
 
 
377 aa  103  5e-21  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  35.68 
 
 
406 aa  103  6e-21  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  31.82 
 
 
414 aa  103  7e-21  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  32.13 
 
 
333 aa  103  8e-21  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  32.13 
 
 
333 aa  103  8e-21  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  32.13 
 
 
333 aa  103  8e-21  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  32.13 
 
 
333 aa  103  8e-21  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3385  membrane-bound transcriptional regulator LytR  30.92 
 
 
313 aa  103  8e-21  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  30.6 
 
 
333 aa  103  8e-21  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  32.13 
 
 
335 aa  103  9e-21  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  32.13 
 
 
333 aa  102  1e-20  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  29.04 
 
 
375 aa  102  1e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  29.04 
 
 
375 aa  102  1e-20  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  36.02 
 
 
299 aa  102  1e-20  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  29.04 
 
 
375 aa  102  1e-20  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  35.11 
 
 
304 aa  102  1e-20  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A1975  transcription antiterminator, LytR family  30.6 
 
 
333 aa  102  1e-20  Bacillus cereus B4264  Bacteria  normal  0.258453  n/a   
 
 
-
 
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