| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1198 |
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| Symbol | |
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| ID | 5733091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1379470 |
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| End bp | 1381227 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641278338 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_001543974 |
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| Protein GI | 159897727 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCAA AAACCGATAC ACCTGAGGAA TCGACCAACG GGTCAGCCAA TGATCTATCG
CTCGATGCTG AGCATGTTCG TAGTCAAGCT ACCACACCCT TGCCAACTCG TTCACGTGCC
GCAGCTAAAG CCGATGCTGC CAACGACGCG GCGTTGATGA ATGATCTGTT GTTGAACAAT
AATTCGACTG CTGCTGCACG CCCACGCCCA CGGGCCGTAC CACGTGCTGA CCACGAAGGA
TCATATGTTC GTGTGCCCAA GGCAGTCCAA TCGGCGGTTG GCAGCCGACC AACCTCGCGC
CCATTGCCAC CCAAAACAGA TCCAATCAAA CGTACCTCGC GTGGAGCTGG CTGTGGTATG
GTTATGCTTG GGGTCTTGCT AACGGTGGTT TTGGTCGGTG GTGGTGGGGC ACTTTGGGCC
TATTTAAAGG TTAAAAATGC CACAAGTGAT GCCTTAGTAA CCATCCCAAC CCAAGCGCCA
AACCTAGTCG AAAATCCTAA TAATCCTAAT CCTCAGCCCA ATCAACCTTT GGCAACCCCC
GATATTGTCA AAGATCCCTT TAATTTGTTG TTGATTGGGG TCGATTTACG TGAAAATGAT
ACCAAAGCTC GCACTGATAC CATCATTGTG TTGCATATTG ATCCAACCCA AAAATGGGCC
AGCATGGTTT CGATTCCGCG CGATAGTTGT GCCGAAATTC CAGGCTACGA TGCCCCAGGC
ACATGTTCGC AGCGAATTAA TGCAGCCTAC GAACTGGGTT ATAAAGAAGG TATCGCCCAA
AATATGACGA TTCCTTCAAC TCAGGCAATG GCATTAACCC GCGATACCGT CGCCAATATG
CTGAATATTA ATATCGATTA TGTTGCTCAA GTCGATTTTA AGGGCTTTCG CAAAATTGTT
GATGCCGTTG GGGGCATTAC AATCGATGTG CAACGCCCGC TATGGGATGC GACTTACCCA
ACCGATGATG ACGATTATGG AGTGATTCGG CTGTTTATTC CGGCTGGCTT GCAACACATG
GATGGCACAA CTGCGCTGCG TTATGCCCGT TCACGCCATC AAGATGCTGA TTATGGCCGC
TCACGCCGCC AACAAGATGT GATTCGAGCG CTGGTTCAAA CCCTCAAAGA TAAAGGCTTG
CTCGACCAAA TTGATGCCTT GGATAGCCTT GCTGCACAAC TCAAAGGCTC GTTCTATACC
GACCTGCCAA TCGATGACCT TGGCAATTTA CGGGCTTTGG CTGGGCTTGG CAGTGATATT
GCCAATGGCC GGATCAAGAG TGTCAAATGG GATACCAGCT CAGTAATCGG CTATATGGAT
GAGTCGCAGT ATGTGCCAAT TTGGGACCCT GCCAGCATCG CGGCCACGGT TGATCAATTA
TTGACCAGCC CAATTCCTGA TACCAATAGC CCAATTGATG GTAGCTCAAA CACACCTTCG
GACGACAATC TAAGCATCGA AGTGATCAAT GGAGCGCAAA TTAGTGGTTT GGCAGGCGAT
GTAGCAACTC ACCTCGAAAA CCGTGACTAT CAATTGCTCA ATCCTTCAAC CGCTTCAACC
GTGTATGACA CCACCAAAAT CATCGATTTT GGCAATCATA AAGAACTGCG TGAGCAACTT
GCTGCTGAAT TGGGGATTAG CAGCCGCAAC ATTATTGTGG TAAGCAAAAC CAGCCCAGCT
CCCGAACAAC CAAAGGGCGA CGCAGCTTTA GTGTTGTTGC TTGGCCGCGA CTATGATGAG
GCGTGGCGCA AACCCTAA
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| Protein sequence | MPAKTDTPEE STNGSANDLS LDAEHVRSQA TTPLPTRSRA AAKADAANDA ALMNDLLLNN
NSTAAARPRP RAVPRADHEG SYVRVPKAVQ SAVGSRPTSR PLPPKTDPIK RTSRGAGCGM
VMLGVLLTVV LVGGGGALWA YLKVKNATSD ALVTIPTQAP NLVENPNNPN PQPNQPLATP
DIVKDPFNLL LIGVDLREND TKARTDTIIV LHIDPTQKWA SMVSIPRDSC AEIPGYDAPG
TCSQRINAAY ELGYKEGIAQ NMTIPSTQAM ALTRDTVANM LNINIDYVAQ VDFKGFRKIV
DAVGGITIDV QRPLWDATYP TDDDDYGVIR LFIPAGLQHM DGTTALRYAR SRHQDADYGR
SRRQQDVIRA LVQTLKDKGL LDQIDALDSL AAQLKGSFYT DLPIDDLGNL RALAGLGSDI
ANGRIKSVKW DTSSVIGYMD ESQYVPIWDP ASIAATVDQL LTSPIPDTNS PIDGSSNTPS
DDNLSIEVIN GAQISGLAGD VATHLENRDY QLLNPSTAST VYDTTKIIDF GNHKELREQL
AAELGISSRN IIVVSKTSPA PEQPKGDAAL VLLLGRDYDE AWRKP
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