| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4510 |
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| Symbol | |
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| ID | 5061000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 5100260 |
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| End bp | 5101522 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640476777 |
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| Product | transcription attenuator LytR |
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| Protein accession | YP_001161316 |
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| Protein GI | 145597019 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCGA CCACCGCCGC CGCTTACCCG CTCCCACACC TGCTTCGCAG CACCGGGCGG
GCGCGGGTGG ACGGCTCCTC CACCGGACGT GCCCGCCCCG CGCAGACAAA CTGGTACCCC
GCGCCTTCCG GACCGACCCG AGGTGGACCG GGCGGACCGG GCGGACCAGG CGGGCCGGGC
GGGCCAGGTG GACCGGGCGG GCCAGGTGGA CCGGGCGGGC CAGGTGGCCG TCCCGGACCG
GGCCGACCGG AGCGGCGTGG CCCACGCCCT CGCTGGGGTC GGATCGCGCT GGTGGCCGGA
GTCGCCGTGC TGGTCTTCGC GCTGCTCGCC GCTACCGGAG CCTGGGTCTA CGCCCGTGGC
CTCGACAACG ATCTCGCCCG GACCAATCCG TTCCCCTCGG GGGCCACCGA CGACCGGCCG
GTCAAGACGG TTGACGGCGC GCTGAACATC CTTCTCGTCG GCACGGACTC ACGGGATCCG
GACGCGCCGA TGGACCAACG CGGCGAGTGG CGCGCCGACA CGATCATCGT GATGCACATC
CCGAGTAACC ACCAGGAGGC GTACCTGGTG TCGATCCCCC GTGACCTTTA CGTGCCGATC
CCGGAGAGCG CGAGCGCCGA CTGCGGCTCG GGGCAGCGGA AAAAGATCAA CGCTGCTTTT
GCCTTCGGTG GGCTCCCCTT GGCGGTCCGC ACCGTGGAGT GCTTCACCGA TGTCCGCCTC
GACCATGTCA TGGCGATCGA CTTCGGCGGC TTCGAAGAGG TCACGGACGC GCTCGGCGGT
GTTGATCTCA CGGTGGAAAA GACGATCACC TCGATCCACA AGCCCTACCG GACCTTCACC
GAGGGCGTCA ACCACATGGA CGGCGCCGAG GCGCTGGACT GGATCCGGCA GCGCAAGCAG
TTCCCCCGGG GCGACTTCGA CCGGATGCGG CACCAGCAGG AGTTCCTCCG CGCGTTGATG
AACAAGGCGG CCAGCACCGG AACGCTCACC AACCCGGTGA AGTTGAACGA CTTCCTCAAG
GCCGTGACCG CCGCGGTCAC CGTCGACGAG GGCTTCTCCC TGGTCGACAT GGCCTTCCAG
TTCCGCAACC TGCGTGGGGA GAACCTGACC TTCGTTACCA GCCCACACAA CGGCAGCCAG
ACCATCAACG GTGAGTCGGT CGTGGTCTCC GACCGGGAGC AGGCGCTCGC GATGTACCAG
GCCATCTCTG CGGACAGCAT GGCCGACTGG GTAGCGGCGA ACGAGAACGA CGCCGGCAGC
TGA
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| Protein sequence | MSATTAAAYP LPHLLRSTGR ARVDGSSTGR ARPAQTNWYP APSGPTRGGP GGPGGPGGPG
GPGGPGGPGG PGGPGGRPGP GRPERRGPRP RWGRIALVAG VAVLVFALLA ATGAWVYARG
LDNDLARTNP FPSGATDDRP VKTVDGALNI LLVGTDSRDP DAPMDQRGEW RADTIIVMHI
PSNHQEAYLV SIPRDLYVPI PESASADCGS GQRKKINAAF AFGGLPLAVR TVECFTDVRL
DHVMAIDFGG FEEVTDALGG VDLTVEKTIT SIHKPYRTFT EGVNHMDGAE ALDWIRQRKQ
FPRGDFDRMR HQQEFLRALM NKAASTGTLT NPVKLNDFLK AVTAAVTVDE GFSLVDMAFQ
FRNLRGENLT FVTSPHNGSQ TINGESVVVS DREQALAMYQ AISADSMADW VAANENDAGS
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