Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0131 |
Symbol | |
ID | 5207064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 161736 |
End bp | 162797 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640593762 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_001274521 |
Protein GI | 148654316 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.763008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATACGAC ACCACGCTGT GCGTCGCCGT TTCGTTCTCG GGTTGATCGG CGTGACGACG ATCATTGCTC TCGTCGCCAT TGCTCGCCTC GGGTTTGAGT GGAAACAGGC GCTCGACGAT GTGGACGCGA TGATTGTCAC GCCCGTCGTG CTTGCACCAA CACCCGAACC CGCAGGCAGC GCCCCCGTAA CAGTTGATGT TCCGGTTGTT GTGACGCCGA CCGTCGCGCC GACGAGCGTG CCAGAAAATG ATGATCCGGT CAATATCCTG CTGCTCGGCG CCGATGCGCG GATCGGCGAG GAGATCAGTC GCACCGATGC GATCATCCTG ATCCACATCA ATCCACGATC AGGCCGCGTC AGCATGCTCT CGTTCCCCCG CGACCTGATA GTTGAGACGC CGGGGTTCGG GCGACGGAAG ATTAATTCGG TCTACCTGAT CGGTGAAACG CGCCTCGGCA AGGGGTATGG CGCCGCACTG CTCAAACAAA CCGTCTCGGA TCTGGTCGGC GTCCCAATTC ACCATTTTGC GTTGATCAAC TTCGATGGTT TTCGTAAGGT GATCGATCTG GTTGGCGGCA TCTCCATCGA TGTCCCGAAA GCAATTGACG ACCCGCGTTA TCCGGTCGAT GCGTTCCCCG GCGATGTGCG TACCATGCAG GTGCACTTCG ATCCAGGACC GCAATGGATG GACGGGGAAC GCGCGTTGAT CTACGCCCGC ACCCGTCACG CCGACAGCGA TTTTGGGCGG AATCAACGGC AGCAGCAGGT GCTGCTTGCG CTGGTCGCAC GGGTGCGCGA ACGAGGGCTG TTGTCGCAGA TCAATAAGAT CGACGATTAC ACCGGTGCGT TGCGCGACTA TGTGCGCACC GATATACCAC GCAGCGAGAT GATCCGGCTG GCGCGTGTCG CGCCCCGGCT CGACCTCGAT AATATCCAGC GGTATGCGAT TGACTCGAAG ATGATTATTA CGCTGGGCAA CCCCGATACC TTCACCGCCG ATCCCGAAGC GGTTCGTGAA ATGGTGGACC GCATGATTGC TGGCGGCGCG CCGACGCCGT AG
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Protein sequence | MIRHHAVRRR FVLGLIGVTT IIALVAIARL GFEWKQALDD VDAMIVTPVV LAPTPEPAGS APVTVDVPVV VTPTVAPTSV PENDDPVNIL LLGADARIGE EISRTDAIIL IHINPRSGRV SMLSFPRDLI VETPGFGRRK INSVYLIGET RLGKGYGAAL LKQTVSDLVG VPIHHFALIN FDGFRKVIDL VGGISIDVPK AIDDPRYPVD AFPGDVRTMQ VHFDPGPQWM DGERALIYAR TRHADSDFGR NQRQQQVLLA LVARVRERGL LSQINKIDDY TGALRDYVRT DIPRSEMIRL ARVAPRLDLD NIQRYAIDSK MIITLGNPDT FTADPEAVRE MVDRMIAGGA PTP
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