More than 300 homologs were found in PanDaTox collection
for query gene Dred_3112 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  100 
 
 
419 aa  856    Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  47.8 
 
 
445 aa  340  2.9999999999999998e-92  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  49.08 
 
 
411 aa  333  3e-90  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  40.14 
 
 
414 aa  285  9e-76  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  49.81 
 
 
418 aa  263  4e-69  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  41.25 
 
 
426 aa  250  3e-65  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  38.23 
 
 
406 aa  229  1e-58  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_011830  Dhaf_3430  cell envelope-related transcriptional attenuator  38.5 
 
 
439 aa  228  2e-58  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0225853  n/a   
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  39.57 
 
 
380 aa  223  7e-57  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  45.64 
 
 
319 aa  214  1.9999999999999998e-54  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  37 
 
 
308 aa  194  3e-48  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  35.86 
 
 
405 aa  187  3e-46  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  38.04 
 
 
344 aa  185  1.0000000000000001e-45  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_011884  Cyan7425_3856  cell envelope-related transcriptional attenuator  39.06 
 
 
451 aa  185  2.0000000000000003e-45  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  41.8 
 
 
436 aa  180  4e-44  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  42.37 
 
 
453 aa  178  2e-43  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_013205  Aaci_1875  cell envelope-related transcriptional attenuator  36.65 
 
 
344 aa  172  6.999999999999999e-42  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1857  cell envelope-related transcriptional attenuator  38.02 
 
 
456 aa  172  1e-41  Trichodesmium erythraeum IMS101  Bacteria  normal  0.046941  normal 
 
 
-
 
NC_007413  Ava_0411  cell envelope-like transcriptional attenuator  41.74 
 
 
472 aa  171  2e-41  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.207765 
 
 
-
 
NC_010320  Teth514_2233  cell envelope-related transcriptional attenuator  36.88 
 
 
303 aa  170  4e-41  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_3223  cell envelope-like transcriptional attenuator  42.52 
 
 
471 aa  170  5e-41  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0961  cell envelope-related function transcriptional attenuator  37.76 
 
 
337 aa  170  5e-41  Synechococcus elongatus PCC 7942  Bacteria  normal  0.472241  normal 
 
 
-
 
NC_011729  PCC7424_2873  cell envelope-related transcriptional attenuator  38.21 
 
 
475 aa  169  9e-41  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_2953  cell envelope-related transcriptional attenuator  37.65 
 
 
502 aa  168  2e-40  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.873931 
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  37.85 
 
 
403 aa  167  4e-40  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_013946  Mrub_2282  cell envelope-related transcriptional attenuator  37.65 
 
 
389 aa  166  6.9999999999999995e-40  Meiothermus ruber DSM 1279  Bacteria  normal  0.072814  hitchhiker  0.000000103578 
 
 
-
 
NC_011726  PCC8801_1109  cell envelope-related transcriptional attenuator  38.02 
 
 
481 aa  165  1.0000000000000001e-39  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3582  cell envelope-related transcriptional attenuator  37.92 
 
 
492 aa  165  1.0000000000000001e-39  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_1138  cell envelope-related transcriptional attenuator  38.02 
 
 
481 aa  165  1.0000000000000001e-39  Cyanothece sp. PCC 8802  Bacteria  normal  0.441684  normal 
 
 
-
 
NC_014212  Mesil_1572  cell envelope-related transcriptional attenuator  36.22 
 
 
384 aa  164  2.0000000000000002e-39  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.0072424  normal  0.757675 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  35.26 
 
 
377 aa  164  3e-39  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  35.26 
 
 
377 aa  164  3e-39  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_2524  cell envelope-related transcriptional attenuator  37.5 
 
 
492 aa  163  6e-39  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  34.19 
 
 
375 aa  161  2e-38  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  34.19 
 
 
375 aa  161  3e-38  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  34.19 
 
 
375 aa  160  3e-38  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  34.19 
 
 
375 aa  160  3e-38  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  34.19 
 
 
375 aa  161  3e-38  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  31.2 
 
 
383 aa  159  1e-37  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_2604  cell envelope-related transcriptional attenuator  35.68 
 
 
471 aa  156  8e-37  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.22991 
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  37.35 
 
 
374 aa  155  9e-37  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  37.35 
 
 
372 aa  155  1e-36  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  34.57 
 
 
356 aa  150  3e-35  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_008025  Dgeo_1232  cell envelope-related transcriptional attenuator  37.28 
 
 
377 aa  149  7e-35  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.113674  normal 
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  34.59 
 
 
374 aa  149  1.0000000000000001e-34  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  37.13 
 
 
504 aa  147  4.0000000000000006e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  37.29 
 
 
390 aa  143  6e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  33.46 
 
 
335 aa  143  7e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_0152  cell envelope-related transcriptional attenuator  37.4 
 
 
271 aa  142  9.999999999999999e-33  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2679  cell envelope-like transcriptional attenuator  33.89 
 
 
503 aa  141  1.9999999999999998e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  34.29 
 
 
310 aa  142  1.9999999999999998e-32  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  33.83 
 
 
353 aa  141  1.9999999999999998e-32  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  32.04 
 
 
322 aa  140  3e-32  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  32.69 
 
 
333 aa  140  3e-32  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_013171  Apre_1005  cell envelope-related transcriptional attenuator  32.42 
 
 
285 aa  140  3e-32  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  32.69 
 
 
333 aa  140  3.9999999999999997e-32  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  42.47 
 
 
320 aa  140  3.9999999999999997e-32  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  32.9 
 
 
443 aa  139  6e-32  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  33.54 
 
 
349 aa  139  7e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_1762  cell envelope-like transcriptional attenuator  33.05 
 
 
501 aa  139  7.999999999999999e-32  'Nostoc azollae' 0708  Bacteria  normal  0.103676  n/a   
 
 
-
 
NC_011658  BCAH187_A2078  transcription antiterminator, LytR family  32.37 
 
 
333 aa  139  1e-31  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000542577  n/a   
 
 
-
 
NC_011725  BCB4264_A1975  transcription antiterminator, LytR family  32.26 
 
 
333 aa  139  1e-31  Bacillus cereus B4264  Bacteria  normal  0.258453  n/a   
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  35.74 
 
 
407 aa  138  2e-31  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  32.36 
 
 
333 aa  138  2e-31  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  32.36 
 
 
333 aa  138  2e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  32.36 
 
 
333 aa  138  2e-31  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  32.36 
 
 
335 aa  138  2e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  32.36 
 
 
333 aa  138  2e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3352  transcription antiterminator, LytR family  31.94 
 
 
335 aa  137  3.0000000000000003e-31  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000199263  hitchhiker  0.0000000000000086496 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  31.6 
 
 
497 aa  137  4e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  32.09 
 
 
505 aa  137  5e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  33.53 
 
 
409 aa  137  5e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  28.72 
 
 
509 aa  136  6.0000000000000005e-31  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  29.47 
 
 
453 aa  135  9.999999999999999e-31  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_002976  SERP0932  transcriptional regulator, putative  38.14 
 
 
329 aa  135  1.9999999999999998e-30  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  32.29 
 
 
337 aa  135  1.9999999999999998e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2090  cell envelope-related transcriptional attenuator  33.33 
 
 
417 aa  134  3e-30  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3385  membrane-bound transcriptional regulator LytR  29.75 
 
 
313 aa  133  6e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  33.99 
 
 
337 aa  133  6.999999999999999e-30  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  37.05 
 
 
326 aa  132  1.0000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_009767  Rcas_0015  cell envelope-related transcriptional attenuator  35.87 
 
 
503 aa  132  2.0000000000000002e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0348648  hitchhiker  0.0000779954 
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  34.57 
 
 
377 aa  130  3e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009487  SaurJH9_1423  cell envelope-related transcriptional attenuator  37.25 
 
 
327 aa  130  3e-29  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.302612  n/a   
 
 
-
 
NC_009632  SaurJH1_1451  transcription attenuator LytR  37.25 
 
 
327 aa  130  3e-29  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1244  cell envelope-related transcriptional attenuator  30.7 
 
 
445 aa  130  4.0000000000000003e-29  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000703915  n/a   
 
 
-
 
NC_008261  CPF_0280  putative transcriptional regulator  30.55 
 
 
340 aa  130  4.0000000000000003e-29  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  34.17 
 
 
336 aa  130  4.0000000000000003e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_008262  CPR_0271  cell envelope-related function transcriptional attenuator  30.54 
 
 
340 aa  130  5.0000000000000004e-29  Clostridium perfringens SM101  Bacteria  normal  0.968761  n/a   
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  31.63 
 
 
512 aa  130  5.0000000000000004e-29  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  30.84 
 
 
338 aa  130  6e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  33.6 
 
 
338 aa  129  8.000000000000001e-29  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  33.6 
 
 
338 aa  128  1.0000000000000001e-28  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  33.6 
 
 
333 aa  129  1.0000000000000001e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0643  transcription antiterminator, LytR family  33.2 
 
 
338 aa  129  1.0000000000000001e-28  Bacillus cereus B4264  Bacteria  normal  0.849345  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  36.28 
 
 
307 aa  129  1.0000000000000001e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  37.76 
 
 
306 aa  129  1.0000000000000001e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  33.6 
 
 
337 aa  128  2.0000000000000002e-28  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4695  transcription antiterminator, LytR family  33.2 
 
 
338 aa  128  2.0000000000000002e-28  Bacillus cereus G9842  Bacteria  normal  0.541641  hitchhiker  0.0000000308245 
 
 
-
 
NC_005957  BT9727_0516  LytR family transcriptional regulator  33.6 
 
 
337 aa  128  2.0000000000000002e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  33.08 
 
 
329 aa  128  2.0000000000000002e-28  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
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