| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3112 |
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| Symbol | |
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| ID | 4956984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3388546 |
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| End bp | 3389805 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640182300 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_001114439 |
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| Protein GI | 134300943 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0132049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGTA GAAAAAGAAG AAAGCTAAGG ATTATTCCTT TTCTCATTTT TTGTACCTTT
TTTGTTTTGG TGTTGGGTAC CGGGTATGTA CTGGCGAACC AATTCCTTTT TAATGGGGAA
GGTCCGTCAC TGTCATCACT AACGCTGGAT GATCCAAAAG AGGAGGATTT GTTTAAGGAT
CGTATGAACT TCCTCCTCAT GGGTATTGAT GCCCGGGAAG GTGAAACCAG AACCCGCACC
GACAGCTTGA TTCTGGTCAG TGTGGATAAG GAGAAAAACC GTATTGCTAT GATATCTCTC
CCCCGGGATA CCCGTGTGGA CATTCCGGGC CATGGCAAGG ATAAAATTAA CGCAGCTAAT
GTGTACGGTG GGCCTGAGTT GGTGATGAAA ACCGTGTCAG ACCTCACTGG TGTTAACATT
GATCATTACT TAATGACCAA TGTGCGGGGC TTCCGTGATA TCGTAGATGC TCTGGGCGGT
GTCACCATTG ATGTAGAAAA ACGCATGTAT CACTATGACC CCTATGATGA GCCGGATTTG
AGAAAGATTG ATCTGCGGCC CGGCGTGCAG GAACTGGATG GTAATAAGGC CCTGCAATAT
GTGCGTTTTA GAAGCGATGC CCTGGGGGAT GTCAGCCGGA CAGAGCGGCA ACAGAAGTTT
CTCAAGGCGT TGGCCCAGGA AATGATGCAG CCCTCCACCA TCACCAAGTT GCCGAAATTG
GTTCCCACCA TTAATAAATA TCTGGATACC AACCTGGGCA TATCCCAGAT GGTTACCCTG
GCTAAGGCAG GAAAAAACCT GAGCAATGTG GACATTGTAA CCCAGACCAT GCCAGGGAAG
TTTTTAAACA TGGATGGCGT TAGTTATTGG AGTGTAGATC CTAAGCAAGC CAAGCTGGTG
GCTGAATCCC TTATCCGGGA TGGCAAGCCC TATGATGTGG TGCTGGGTGA AGAGAACGTT
AACACGAAAA GTGTAGCAAA GGAAACCACT AAGTCCCAGA GCAAAGAAAG TGCACCGGTA
AATCCCATTT TGCCTACCAA TAATAAAACC GCTACTAACC AGGAAACACC CGAAAAGAAC
ACCGGTAACC AGGATAGTAA AGTAAAGCCT AAGGACTCCG GTGTAGAAAT TATTGTTAAC
CCAGACAAAG AGTCTGGCAA TCAGGGTACT ACAAAGGGAA CCACAGAGAC AAAGAAGAAT
AATGCAGTCT CCGGAGACAA TGCCGGGGCC AGTAGTTGGC TTCCCACCAC GGAGCTATAA
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| Protein sequence | MERRKRRKLR IIPFLIFCTF FVLVLGTGYV LANQFLFNGE GPSLSSLTLD DPKEEDLFKD
RMNFLLMGID AREGETRTRT DSLILVSVDK EKNRIAMISL PRDTRVDIPG HGKDKINAAN
VYGGPELVMK TVSDLTGVNI DHYLMTNVRG FRDIVDALGG VTIDVEKRMY HYDPYDEPDL
RKIDLRPGVQ ELDGNKALQY VRFRSDALGD VSRTERQQKF LKALAQEMMQ PSTITKLPKL
VPTINKYLDT NLGISQMVTL AKAGKNLSNV DIVTQTMPGK FLNMDGVSYW SVDPKQAKLV
AESLIRDGKP YDVVLGEENV NTKSVAKETT KSQSKESAPV NPILPTNNKT ATNQETPEKN
TGNQDSKVKP KDSGVEIIVN PDKESGNQGT TKGTTETKKN NAVSGDNAGA SSWLPTTEL
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