| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1857 |
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| Symbol | |
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| ID | 4242720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 2841315 |
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| End bp | 2842685 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638106978 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_721586 |
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| Protein GI | 113475525 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.046941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATA GTTCTTCTAA TAACTCCCAG CCTATTTTCT TGAAATTGTG GTTCTGGATA
CTTATATTAC TGTTAAGTGG AACCATAACT ACTTCTTTGG GAGCAATAAC TGCTTTGTTT
GCCCCTGTTG AACCAGAATT TATAACTCAG CTACTCCAAG AGTTTATTCC AGATATTATT
GTTTGGCGTA AACGCTTACC TTACCAACTT TCACGACCTA TGAATATCCT AGTGATGGGA
ATTGATGAAG TTCCTGGGGT AACAGAAGAT TCTCCTAATG TATTTGAAGG CCGTAGTGAT
ACTTTACTAT TAGTACGAGC TAATCCTAGG AAGAAGACTG TAAGTTTACT TTCTGTACCA
CGAGATACTA AAGTCCAAAT TCCTGGAATA GGTCTTGCTA AAATTAATGA AGCTAATCTA
TATGGGGGAC CAAAACTGGC AAAAAATATT TTAAAAAATA CTCTGAATAA TGTTGAGGTT
GATCGTTATG TGCGAGTAAG CAAAAAGGGG TTTCGAGAAT TAGTAGAACA ATTGGGTGGG
GTAGAAGTTT TTATTTCTCA ACCTATGTTT TATATTGACA ATACTCAGCA GTTAAAAATA
GATTTACAGC CAGGTTGGCA AACTCTCAAT GGAGAACAAG CGCAGCAATT TGCTCGTTTC
CGAGACGAAG TTTATGGCGA TATTGGGAGG GTGCAAAGAC AACAAGTTTT GCTAAAGGCC
CTGCGAAGTC GTATTACTAA TGTGACAGTT TTACCTCGCC TACCTCAAAT TATTCGGGTG
ATGCAGAAGT ATGTTGATAC TAATTTAAGT TTTCCGGAAA TGCTGGCTTT GATCAGTTTT
AGTCTTGACT TGGAGCGAGA TGATTTAAAA ATGGTAATGT TGCCAGGAAG ACCTAGTTCT
AGAAATGAGT ATTTTGCTAG TTATTGGATT ATAGATCAGG CGGGTCGCGA TCGTGTCCTA
GAACAATATT TCGATTTCAA GTTAGACAAG TTTAATTATG ACAATATATA TAAAAAATAT
AAAAATGAAA TTTTGCCACA AGAAAAGAAA ATAGCCGTGC AAAATGCCTC TAGTCACCCT
CAAGTAGCAA CAAAATTTGC TCAGTATTTG CGTAACGAAG GATTTGACAA TGTTTATGTA
GTTCCTGACT GGTCTGACAA ACAACATTTG ACTCAAGTTA TTGTTCAAGG GGGTTATTTA
GATTTAGCAG AAGTTTTGCA AAATACTTTG GGTTTTGGTA ATATTGAACC AACTTCTACA
GGTGAGATAG GTTCTGATTT GACCATTAGA TTAGGGGAAG ATTCTATTAA TAAAATTAAT
CTTTTAGAAA AAAATGAAGT TGAAGCCAAA ATTGATTCAT CAGACCTTTA A
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| Protein sequence | MNNSSSNNSQ PIFLKLWFWI LILLLSGTIT TSLGAITALF APVEPEFITQ LLQEFIPDII
VWRKRLPYQL SRPMNILVMG IDEVPGVTED SPNVFEGRSD TLLLVRANPR KKTVSLLSVP
RDTKVQIPGI GLAKINEANL YGGPKLAKNI LKNTLNNVEV DRYVRVSKKG FRELVEQLGG
VEVFISQPMF YIDNTQQLKI DLQPGWQTLN GEQAQQFARF RDEVYGDIGR VQRQQVLLKA
LRSRITNVTV LPRLPQIIRV MQKYVDTNLS FPEMLALISF SLDLERDDLK MVMLPGRPSS
RNEYFASYWI IDQAGRDRVL EQYFDFKLDK FNYDNIYKKY KNEILPQEKK IAVQNASSHP
QVATKFAQYL RNEGFDNVYV VPDWSDKQHL TQVIVQGGYL DLAEVLQNTL GFGNIEPTST
GEIGSDLTIR LGEDSINKIN LLEKNEVEAK IDSSDL
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