More than 300 homologs were found in PanDaTox collection
for query gene Rcas_0287 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_0287  cell envelope-related transcriptional attenuator  100 
 
 
412 aa  805    Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0249  cell envelope-related transcriptional attenuator  87.44 
 
 
461 aa  677    Roseiflexus sp. RS-1  Bacteria  normal  0.176246  normal  0.0400211 
 
 
-
 
NC_011831  Cagg_3186  cell envelope-related transcriptional attenuator  54.09 
 
 
451 aa  415  9.999999999999999e-116  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.689692 
 
 
-
 
NC_009767  Rcas_1996  cell envelope-related transcriptional attenuator  41.61 
 
 
527 aa  253  5.000000000000001e-66  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.177975 
 
 
-
 
NC_011831  Cagg_1700  cell envelope-related transcriptional attenuator  41.69 
 
 
463 aa  248  1e-64  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.55383  normal 
 
 
-
 
NC_009523  RoseRS_1714  cell envelope-related transcriptional attenuator  42.05 
 
 
528 aa  235  9e-61  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.603952 
 
 
-
 
NC_009972  Haur_1198  cell envelope-related transcriptional attenuator  33.58 
 
 
585 aa  187  4e-46  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0015  cell envelope-related transcriptional attenuator  43.03 
 
 
503 aa  174  1.9999999999999998e-42  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0348648  hitchhiker  0.0000779954 
 
 
-
 
NC_009523  RoseRS_4519  cell envelope-related transcriptional attenuator  41.39 
 
 
505 aa  169  1e-40  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  40.35 
 
 
356 aa  169  1e-40  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  40.35 
 
 
353 aa  169  1e-40  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_011831  Cagg_3226  cell envelope-related transcriptional attenuator  50.53 
 
 
370 aa  159  6e-38  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.501586 
 
 
-
 
NC_011831  Cagg_1876  cell envelope-related transcriptional attenuator  36.16 
 
 
455 aa  152  7e-36  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000275813  normal 
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  43.66 
 
 
377 aa  148  1.0000000000000001e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  30.05 
 
 
504 aa  136  6.0000000000000005e-31  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_009972  Haur_4851  cell envelope-related transcriptional attenuator  39.41 
 
 
432 aa  131  3e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  37.89 
 
 
308 aa  127  3e-28  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  28.81 
 
 
405 aa  127  3e-28  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_005957  BT9727_3347  transcriptional regulator LytR, attenuator for lytABC and lytR expression  28.86 
 
 
345 aa  125  2e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000255205  n/a   
 
 
-
 
NC_006274  BCZK3295  transcriptional regulator LytR, attenuator for lytABC and lytR expression  28.37 
 
 
345 aa  124  2e-27  Bacillus cereus E33L  Bacteria  normal  0.189328  n/a   
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  29.27 
 
 
495 aa  125  2e-27  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_3598  transcription antiterminator, LytR family  28.65 
 
 
345 aa  124  3e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000000156827 
 
 
-
 
NC_005945  BAS0746  LytR family transcription antiterminator  32.18 
 
 
398 aa  124  4e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS3381  LytR family transcription antiterminator  28.37 
 
 
345 aa  124  4e-27  Bacillus anthracis str. Sterne  Bacteria  normal  0.288134  n/a   
 
 
-
 
NC_005957  BT9727_0694  LytR family transcriptional regulator  32.18 
 
 
398 aa  124  4e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0354301  n/a   
 
 
-
 
NC_007530  GBAA_0783  LytR family transcription antiterminator  32.18 
 
 
398 aa  124  4e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_3647  LytR family transcription antiterminator  28.37 
 
 
345 aa  124  4e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0513784  n/a   
 
 
-
 
NC_011773  BCAH820_0878  transcription antiterminator, LytR family  32.18 
 
 
398 aa  123  5e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.78734e-21 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  30.67 
 
 
505 aa  122  9e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_003909  BCE_3605  LytR family transcription antiterminator  30.23 
 
 
345 aa  122  9.999999999999999e-27  Bacillus cereus ATCC 10987  Bacteria  normal  0.0149783  n/a   
 
 
-
 
NC_006274  BCZK0680  LytR family transcriptional regulator  32.18 
 
 
398 aa  122  9.999999999999999e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3613  transcription antiterminator, LytR family  30.23 
 
 
345 aa  122  9.999999999999999e-27  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000276906  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  25.49 
 
 
563 aa  120  4.9999999999999996e-26  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_011725  BCB4264_A3698  transcription antiterminator, LytR family  29.28 
 
 
345 aa  120  6e-26  Bacillus cereus B4264  Bacteria  hitchhiker  0.00180581  n/a   
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  29.82 
 
 
497 aa  119  7.999999999999999e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0946  transcription antiterminator, LytR family  29.25 
 
 
400 aa  119  9e-26  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000012569  n/a   
 
 
-
 
NC_011725  BCB4264_A0838  transcription antiterminator, LytR family  29.43 
 
 
399 aa  119  9.999999999999999e-26  Bacillus cereus B4264  Bacteria  hitchhiker  0.00382216  n/a   
 
 
-
 
NC_011772  BCG9842_B4498  transcription antiterminator, LytR family  29.13 
 
 
399 aa  118  1.9999999999999998e-25  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0000000000182536 
 
 
-
 
NC_010184  BcerKBAB4_3273  cell envelope-related transcriptional attenuator  32.93 
 
 
345 aa  116  6e-25  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00000492202  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  32.2 
 
 
338 aa  116  6.9999999999999995e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1619  transcription antiterminator, LytR family  28.62 
 
 
345 aa  116  8.999999999999998e-25  Bacillus cereus G9842  Bacteria  hitchhiker  0.00116574  hitchhiker  0.0000348163 
 
 
-
 
NC_003909  BCE_0875  LytR family transcription antiterminator  33.19 
 
 
400 aa  115  1.0000000000000001e-24  Bacillus cereus ATCC 10987  Bacteria  normal  0.0676567  n/a   
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  31.49 
 
 
337 aa  115  1.0000000000000001e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0516  LytR family transcriptional regulator  31.49 
 
 
337 aa  115  1.0000000000000001e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0516  LytR family transcriptional regulator  31.49 
 
 
337 aa  115  1.0000000000000001e-24  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  31.49 
 
 
333 aa  115  1.0000000000000001e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0648  cell envelope-related transcriptional attenuator  33.48 
 
 
388 aa  115  1.0000000000000001e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.500203  n/a   
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  31.49 
 
 
338 aa  115  1.0000000000000001e-24  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  27.33 
 
 
521 aa  115  2.0000000000000002e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  37.69 
 
 
344 aa  115  2.0000000000000002e-24  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_011725  BCB4264_A0643  transcription antiterminator, LytR family  31.29 
 
 
338 aa  114  2.0000000000000002e-24  Bacillus cereus B4264  Bacteria  normal  0.849345  n/a   
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  30.92 
 
 
337 aa  115  2.0000000000000002e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4695  transcription antiterminator, LytR family  31.54 
 
 
338 aa  114  2.0000000000000002e-24  Bacillus cereus G9842  Bacteria  normal  0.541641  hitchhiker  0.0000000308245 
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  31.78 
 
 
338 aa  114  2.0000000000000002e-24  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0694  cell envelope-related transcriptional attenuator  29.71 
 
 
401 aa  114  3e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.12922  n/a   
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  32.49 
 
 
329 aa  114  3e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  31.36 
 
 
337 aa  113  5e-24  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  29.79 
 
 
383 aa  113  5e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  35.22 
 
 
414 aa  112  8.000000000000001e-24  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  29.83 
 
 
509 aa  112  1.0000000000000001e-23  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  34.56 
 
 
453 aa  112  1.0000000000000001e-23  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  38.95 
 
 
335 aa  112  1.0000000000000001e-23  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  36.84 
 
 
419 aa  112  1.0000000000000001e-23  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_011772  BCG9842_B3352  transcription antiterminator, LytR family  32.34 
 
 
335 aa  111  2.0000000000000002e-23  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000199263  hitchhiker  0.0000000000000086496 
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  34.85 
 
 
317 aa  111  2.0000000000000002e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1975  transcription antiterminator, LytR family  32.34 
 
 
333 aa  112  2.0000000000000002e-23  Bacillus cereus B4264  Bacteria  normal  0.258453  n/a   
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  33.33 
 
 
380 aa  111  2.0000000000000002e-23  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  32.82 
 
 
333 aa  111  3e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  32.82 
 
 
333 aa  111  3e-23  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  32.82 
 
 
333 aa  111  3e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  36.56 
 
 
304 aa  111  3e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  32.82 
 
 
335 aa  110  3e-23  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  32.82 
 
 
333 aa  111  3e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  29.26 
 
 
333 aa  111  3e-23  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  32.82 
 
 
333 aa  110  4.0000000000000004e-23  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  31.67 
 
 
374 aa  110  5e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  36.84 
 
 
310 aa  110  6e-23  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  30.6 
 
 
490 aa  110  7.000000000000001e-23  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  31.95 
 
 
377 aa  109  1e-22  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  31.48 
 
 
418 aa  108  1e-22  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_011658  BCAH187_A2078  transcription antiterminator, LytR family  32.43 
 
 
333 aa  109  1e-22  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000542577  n/a   
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  36.32 
 
 
304 aa  108  2e-22  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  31.95 
 
 
377 aa  108  2e-22  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  33.1 
 
 
319 aa  108  2e-22  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_008532  STER_0378  transcriptional regulator  30.08 
 
 
408 aa  108  2e-22  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0016641  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  30.65 
 
 
375 aa  107  3e-22  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  30.89 
 
 
375 aa  107  3e-22  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  30.89 
 
 
375 aa  107  3e-22  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  30.65 
 
 
375 aa  107  3e-22  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  31.54 
 
 
374 aa  107  3e-22  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  30.65 
 
 
375 aa  108  3e-22  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  31.54 
 
 
372 aa  107  4e-22  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  33.71 
 
 
445 aa  107  5e-22  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  29.22 
 
 
522 aa  107  5e-22  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  36.02 
 
 
299 aa  107  6e-22  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  31.03 
 
 
322 aa  106  7e-22  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_013411  GYMC61_3385  membrane-bound transcriptional regulator LytR  37.37 
 
 
313 aa  106  1e-21  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  31.53 
 
 
442 aa  106  1e-21  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  34.93 
 
 
411 aa  105  1e-21  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  34.42 
 
 
426 aa  105  2e-21  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
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