| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0287 |
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| Symbol | |
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| ID | 5537749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 354791 |
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| End bp | 356029 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640892451 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_001430438 |
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| Protein GI | 156740309 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGCG GTGTGCTGCT GATCATCCTC GTCGCTCTGC TCTACTGGCA GTTCGCTGCC
GCCGTCGCGC CGCTGAGCGT CGCCGATGCG CGACCATTCC CCCCGCTCAA CCCGCCCGGC
ACGGGGATCA ATGTCCTGCT CATCGGGGTC GATGAGCGTC CGGATCACCC GGAAGAAGGG
GTGCGCAGCG ATACCCTTAT CGTTGTGCAT CTCGACACCA TTGGTCGGCG GGTCAGTCTG
CTCTCCATCC CGCGCGACAC GCGCGTGGAT GTGCGTGACA TTGGTCCCAC CAAGATCAAT
GTCGCCTACG GGCGCGGCTA TACGGCTGCC GAGAAACTCT ACGGCGAGAC GACAACGCCA
GCGCAAGGGG GAATGGCGCT TGCTGCCGAG ACGGTCGAGC GGTTTCTCGA CCTTCCTATT
CATTACACAG CGCAGATCAA TTTCGACGGT TTTGCGCGTG TGATCGATGC GCTCGGCGGC
GTGACCATCG ACGTACCGCG CCGGATTGTC GATGATGCCT ACCCGACTCC CGATTTCGGT
ACGGTGCGCA TCGCGTTTGA GCCTGGTCCG CAACGGATGG ATGGGGCGCG CGCCCTGATC
TACGCCCGTA CCCGCCACGC GGACAGCGAC TTCGGACGTG CCGAACGTCA GCAACAGGTC
ATTCGCGCCA TCATCGACGA ACTGCGCTCC CGTGGTCCCA TCGGTGCAGC ATTGCTGGCG
CCAGCGCTCG GTCGGGCGCT CGATGGCGCA TTCGCCACAA CTCTGCCGCT GTCGCGCCCT
GATATGCTGC TGGGTATGGC GTGGATCGCA ACCGGGATCG ACCCGTCGGC AATCGGGCAG
TATCGCATCG CACCCGATAC TGCGCCCAAC TTCCGCGAAA TCGGGTCCGA CATTCTTTGG
GACCCAGAGG AGGTGCGCGG GGTGGTGCGC ACCTTTCTGG CGACACCCGA TGTCGAAACC
GAAGAGGCGC GCATTCAGGT GCTGAACGGC GCTGGCATCA CCGGACTTGC GCGGCGCGTC
AGCGGTGAAC TTGAGTCGGC AGGGTTTACC GTTGTGCCCG CCGCCGATGC GCCGCGCAGC
GATGTGCTCC GCACTATCGT GTATGATGTG ACCGGCAAAC CCGCCACTGC CCGCCGCCTG
GCGGTGCTGC TGAACGCCGA CATCCGGCGC GGGTCTCCCG ATGGCGTCAA TCCGACGGTT
GACATCGTCG TAGTGCTGGG GCGGGATCAG GTGAAGTGA
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| Protein sequence | MLSGVLLIIL VALLYWQFAA AVAPLSVADA RPFPPLNPPG TGINVLLIGV DERPDHPEEG
VRSDTLIVVH LDTIGRRVSL LSIPRDTRVD VRDIGPTKIN VAYGRGYTAA EKLYGETTTP
AQGGMALAAE TVERFLDLPI HYTAQINFDG FARVIDALGG VTIDVPRRIV DDAYPTPDFG
TVRIAFEPGP QRMDGARALI YARTRHADSD FGRAERQQQV IRAIIDELRS RGPIGAALLA
PALGRALDGA FATTLPLSRP DMLLGMAWIA TGIDPSAIGQ YRIAPDTAPN FREIGSDILW
DPEEVRGVVR TFLATPDVET EEARIQVLNG AGITGLARRV SGELESAGFT VVPAADAPRS
DVLRTIVYDV TGKPATARRL AVLLNADIRR GSPDGVNPTV DIVVVLGRDQ VK
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