| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0378 |
|---|
| Symbol | |
|---|
| ID | 4437935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 330639 |
|---|
| End bp | 331865 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639676108 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_819875 |
|---|
| Protein GI | 116627256 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1316] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0016641 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTG GACGAAAAAT TTTATTGATG TTGTCGGCAA TTCTTGCCAC CACAGTAGTA
GCTGCTGGTA TTTATCTAAC GACAACTTAT AATTATGCTA CAGGAGAATT GTCAAAAACC
TTTAGAGTAT CAAAGGTAAC GTCAGGGAAT AGTAAGGCTA TTCAACAGAC AAAGCCTATA
ACTATTCTTT TGATGGGGGT GGATACAGGA TCCAAAGGAC GTAAGGAAAC CTGGGAAGGA
AATTCTGATA CTATGATTTT GGTAACAGTG AATCCTAAGA CTAAGAGAAC TACCATGACC
AGTTTGGAAC GTGACCTTTT GGCAGATGTT GAGGGATCGG GTGAAGCAAA ACTAAACTCA
GCCTATGCTG AGGGTGGGGC TGACTTAGCT ATTTCAACCA TTCAAAAGGT TTTAGATATT
GATATTGACT ACTATGCGCT GATTAATATG CATGGTATGA TTGATTTGGT GGATGCCGTT
GGTGGTATCG AGGTAACGAA CCATTTTGAT TTCCCAATTT CGATTGCAGA AAATGAACCA
GAATTTCAGG CGAAAGTAGA GCCTGGAACC CATAAAATCA ATGGAGAACA GGCCTTAGTG
TATTCACGTA TGCGTTATGA TGATCCCGAT GGTGATTACG GTCGTCAAAA ACGTCAACGT
GAGGTTATTC AAAAGATTGT GGCTAAGCTC TTGAAGATGG ACTCGATAGG TTCTTATAAG
AAAATTTTGT CTGCTGTCAG TTCGAATGTA CAAACAAGTA TCAATCTTGG TGATAGCACT
ACTCTGCGTG GTTTGATGGG TTATAGTGAG GCCCTTAAAA ATATCAAGTC TTACCAGTTG
GCTGGTTCGG ATGCAATGAT CAATGGTGGA AGCTACCAAG TAGCCTCAAC TGAGGATATT
CTTAAGGTCC AAAACCGTAT TAAGAAGGAA GTTGGCAAGA AGGGAGTTTC TGAATCTAAA
CTTAAGACTA GTTTGGTACT CAATGATTTT GGGACTTCTA GCTATGTTTC AGATGATTTC
GTTAACTCTA CTGGAAGTTA TGAGGCTGGA CCATCTGAGG CAACAGGTGG TGGATCAGTA
AGTACCTACT ATGGAGGTAC CACCTACGGC AATAGCTACA CTGAGAATAC TAGTAATTAT
GTTCAGGACC AAGCTACAAC TGCCCCTACA ATTAATTATA ATGGTTCAGG TGTAACTACT
TATAACTTGG TTCCAGCAGC ACAATAG
|
|---|
| Protein sequence | MKLGRKILLM LSAILATTVV AAGIYLTTTY NYATGELSKT FRVSKVTSGN SKAIQQTKPI
TILLMGVDTG SKGRKETWEG NSDTMILVTV NPKTKRTTMT SLERDLLADV EGSGEAKLNS
AYAEGGADLA ISTIQKVLDI DIDYYALINM HGMIDLVDAV GGIEVTNHFD FPISIAENEP
EFQAKVEPGT HKINGEQALV YSRMRYDDPD GDYGRQKRQR EVIQKIVAKL LKMDSIGSYK
KILSAVSSNV QTSINLGDST TLRGLMGYSE ALKNIKSYQL AGSDAMINGG SYQVASTEDI
LKVQNRIKKE VGKKGVSESK LKTSLVLNDF GTSSYVSDDF VNSTGSYEAG PSEATGGGSV
STYYGGTTYG NSYTENTSNY VQDQATTAPT INYNGSGVTT YNLVPAAQ
|
|---|
| |