Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1057 |
Symbol | |
ID | 5188649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1120617 |
End bp | 1121618 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640590897 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_001271652 |
Protein GI | 148544282 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0371332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAGACG AAAATAATCG ACCCTTGAAT AATGATGATG GTATGCAACA ACCGGAACAA CACCATCATC ACCACCACAG ACATCATCGG CGTCACCGGG GATGGAAGAT CTTCTGGTCA GTTGTAGGGG TATTAGTCCT CGTCGCCCTG TTCTTTGCGG GGATGGCATG GCACAACCTA AAATCAACGA CCGATGATAT GTATAGTAGC GCGGGTGCTA CCAAGTCGCG GGATGCGCAA AAGGTGCTTG ATCAAAAGAA ACCCGTGTCA ATCCTCCTGT TAGGAACTGA TACCGGGGCA CTTGGTCGGG ATTATAAGGG TCGGACGGAT ACGATCATGG TAATGACTTT GAATCCAAAG ACGAAGACGA CCACGATTGT TAGTCTTCCT CGGGATATGA AGGTTAACTT ACCGGGTTAT CCGCAATATT CACCAGCAAA GATCAATGCT GCTTATACCT ATGGGGGAGT CAAGGAATCA ATTAATACGA TCCAGGACCA CTTCAATATC CCAATTGACT ACTATGTCTT AGTCAACATG GGTGGTTTGG AAAAGGCAAT CAACCAAGTC GGTGGAGTTG ATGTCAAGTC CCCATTGACG TTTGATTATG AAGGCTATCA CTTTGAGAAG GGTGAGACCT ACCACATGAA TGGAAAAAAG GCCCTTCAAT TCAGTCGGAT GCGGTATGAC GATCCTGATG GTGACTATGG TCGGCAACAA CGGCAACGGT TAGTAATTAC TGCTTTGCTT AAGAAGTCCG TTTCATATAA GACGGTTCTT AACCGGTCAT TCTTACGGTC AGTATCTGAT AACTCACAAA CCGATTTGAC CTTCAATGAT ATGATGCGGT TAGCGCAAAG CTATCGTGAT ACGAACGAAC ACATCGTTCA AGATCATGCG CAAGGGCGAG GGCAAAATGA AGACGGTCAA GCCTTTGAAG TGGTGCCAAC CAGTGAGCAA CAACGGATCA CTAACTTGTT ACAAAATAGT CTAAAAAATT AA
|
Protein sequence | MSDENNRPLN NDDGMQQPEQ HHHHHHRHHR RHRGWKIFWS VVGVLVLVAL FFAGMAWHNL KSTTDDMYSS AGATKSRDAQ KVLDQKKPVS ILLLGTDTGA LGRDYKGRTD TIMVMTLNPK TKTTTIVSLP RDMKVNLPGY PQYSPAKINA AYTYGGVKES INTIQDHFNI PIDYYVLVNM GGLEKAINQV GGVDVKSPLT FDYEGYHFEK GETYHMNGKK ALQFSRMRYD DPDGDYGRQQ RQRLVITALL KKSVSYKTVL NRSFLRSVSD NSQTDLTFND MMRLAQSYRD TNEHIVQDHA QGRGQNEDGQ AFEVVPTSEQ QRITNLLQNS LKN
|
| |