| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1864 |
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| Symbol | |
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| ID | 8381028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 2041528 |
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| End bp | 2042703 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645004618 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_003161810 |
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| Protein GI | 256833083 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.383316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.036217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACGACGT CGAAACCACC CGCACGACCC CCACTCGCGC ATGCCCCCCA ACGGCACCCG
CGAGTCGTCC TGCGCACACT CAGCCTCCTC CTTGTCGGGG CTGTGGCCTT TGGCGCCTCT
GCAACATACG CAGGGATGCA ACGTGTCAAA GGGCTCGTGA AAACCGAAAG CGTCGAAGAA
CTTGTCGCAC CACCAGCAAC TCCCCCGGAA GATTCAGAAG CGGGGAACTC CCTCAACATT
CTGGTCATGG GGTCTGACAA ACGTGTCGAT GGCTCTGTTG CAGGCATGCG TTCAGACACG
ACAATGGTTG TGCACATCTC GGAGAACCGA GACCGGATTG AAGTCATTTC CATCCCCCGC
GATTCGATGG TCTACATTCC CGAGTGCAAA ACAAGTAATG GCACCGTACT TCCGGCGATC
AACCGAGCAA TATTCAACTC TGCTTTCGCC CGGGGGTGGG ACAACGGGCT TGACATTGCA
TCCGCTGCTG CGTGTTCGAT TAACACTGTT CAACAAAACA CTGGTTTGCG GATTGATCAC
TACGTTGTTG TCGATTTTGA GGGGTACACC GGTATGGTGG ACGCCCTTGG TGGTATCGAG
ATTGACATCC CTGAAGCAGT GGACGCCCCG AAAGCAGACA ACCTGGTGTT GGAAGCTGGA
CCCCAAACCC TCACAGGACA CCAAGCATTA TCACTTGTTC GGGCACGAAA AGGGACAGGT
TGGGGCCTTG AAATGGGTTC TGACCTCAAA CGTATTGAAC GACAACAAGC AGTCCTTGAC
GCGACTGCTG AGACAGTTTT CAAACAAAAT ATCCTCACCG ACCTGAACAA ACTCACCCAG
TTCGCTACGG CAGGCATGTC CTCCTTGACG ATGAACCCAC AGTTGTCAGA CAACATGATT
GGTCTCGCCA CGTCCATGTC GTCTCTCAAG ACCGAGAACA TTCACTTTAT TGCTGTTCCT
GTTGCAGACG ATCCAGCTGA CCGCAACCGT GTGGTGTGGA CAACGGAAGC AACCCCTATG
TGGGAAAAAC TTGCCCGAGA TGAGCCTCTT GTTGAACCGG TAGAGTGTGA CCCTGCCCAA
GCGGACACCG CCGAAGGTGA TGCCGCCACA GATGACAGTT CCGACTGTGT CCCCGCAGGT
TCGGATACTG ACTCCACAGG AACCACAGAG AACTGA
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| Protein sequence | MTTSKPPARP PLAHAPQRHP RVVLRTLSLL LVGAVAFGAS ATYAGMQRVK GLVKTESVEE
LVAPPATPPE DSEAGNSLNI LVMGSDKRVD GSVAGMRSDT TMVVHISENR DRIEVISIPR
DSMVYIPECK TSNGTVLPAI NRAIFNSAFA RGWDNGLDIA SAAACSINTV QQNTGLRIDH
YVVVDFEGYT GMVDALGGIE IDIPEAVDAP KADNLVLEAG PQTLTGHQAL SLVRARKGTG
WGLEMGSDLK RIERQQAVLD ATAETVFKQN ILTDLNKLTQ FATAGMSSLT MNPQLSDNMI
GLATSMSSLK TENIHFIAVP VADDPADRNR VVWTTEATPM WEKLARDEPL VEPVECDPAQ
ADTAEGDAAT DDSSDCVPAG SDTDSTGTTE N
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