More than 300 homologs were found in PanDaTox collection
for query gene Ksed_26120 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_26120  cell envelope-related function transcriptional attenuator common domain protein  100 
 
 
497 aa  998    Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_09180  cell envelope-related function transcriptional attenuator common domain  36.68 
 
 
791 aa  258  2e-67  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1877  cell envelope-related transcriptional attenuator  34.89 
 
 
539 aa  246  6e-64  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.801543 
 
 
-
 
NC_008699  Noca_2614  cell envelope-related transcriptional attenuator  36.83 
 
 
508 aa  239  1e-61  Nocardioides sp. JS614  Bacteria  normal  0.235431  n/a   
 
 
-
 
NC_014210  Ndas_1419  cell envelope-related transcriptional attenuator  35.64 
 
 
511 aa  238  2e-61  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.327426  normal 
 
 
-
 
NC_008541  Arth_1187  cell envelope-related transcriptional attenuator  37.2 
 
 
546 aa  236  6e-61  Arthrobacter sp. FB24  Bacteria  normal  0.208279  n/a   
 
 
-
 
NC_007333  Tfu_1372  cell envelope-related transcriptional attenuator  33.2 
 
 
490 aa  229  6e-59  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2629  cell envelope-related transcriptional attenuator  32.97 
 
 
496 aa  224  2e-57  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000175757  n/a   
 
 
-
 
NC_011886  Achl_1258  cell envelope-related transcriptional attenuator  33.33 
 
 
549 aa  222  9.999999999999999e-57  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000145407 
 
 
-
 
NC_013757  Gobs_4982  cell envelope-related transcriptional attenuator  35.71 
 
 
523 aa  219  1e-55  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2169  cell envelope-related transcriptional attenuator  34 
 
 
504 aa  216  5.9999999999999996e-55  Thermobispora bispora DSM 43833  Bacteria  normal  0.188939  normal 
 
 
-
 
NC_013595  Sros_3414  Transcriptional regulator-like protein  33.86 
 
 
609 aa  216  7e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.442542  normal  0.390313 
 
 
-
 
NC_012803  Mlut_05220  cell envelope-related function transcriptional attenuator common domain protein  35.45 
 
 
537 aa  213  4.9999999999999996e-54  Micrococcus luteus NCTC 2665  Bacteria  normal  0.855799  n/a   
 
 
-
 
NC_008699  Noca_1398  cell envelope-related transcriptional attenuator  30.24 
 
 
481 aa  210  4e-53  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9275  Transcriptional regulator-like protein  34.17 
 
 
457 aa  209  7e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6456  Transcriptional regulator-like protein  33.18 
 
 
543 aa  206  9e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.00855962 
 
 
-
 
NC_007333  Tfu_0017  cell envelope-related transcriptional attenuator  34.52 
 
 
472 aa  202  9.999999999999999e-51  Thermobifida fusca YX  Bacteria  hitchhiker  0.00643877  n/a   
 
 
-
 
NC_009972  Haur_1198  cell envelope-related transcriptional attenuator  32.95 
 
 
585 aa  113  1.0000000000000001e-23  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  28.47 
 
 
353 aa  104  5e-21  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  26.44 
 
 
356 aa  98.6  2e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  26.27 
 
 
333 aa  93.6  7e-18  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  26.27 
 
 
333 aa  93.6  7e-18  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  26.27 
 
 
333 aa  93.6  7e-18  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  26.27 
 
 
333 aa  93.6  7e-18  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  26.27 
 
 
333 aa  93.6  7e-18  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  26.27 
 
 
335 aa  93.2  9e-18  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  26.27 
 
 
333 aa  93.2  9e-18  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_011772  BCG9842_B3352  transcription antiterminator, LytR family  26.27 
 
 
335 aa  93.2  9e-18  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000199263  hitchhiker  0.0000000000000086496 
 
 
-
 
NC_011725  BCB4264_A1975  transcription antiterminator, LytR family  25 
 
 
333 aa  93.2  1e-17  Bacillus cereus B4264  Bacteria  normal  0.258453  n/a   
 
 
-
 
NC_011658  BCAH187_A2078  transcription antiterminator, LytR family  25.85 
 
 
333 aa  92  2e-17  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000542577  n/a   
 
 
-
 
NC_009767  Rcas_0287  cell envelope-related transcriptional attenuator  30.04 
 
 
412 aa  92  2e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  28.42 
 
 
377 aa  89.7  1e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_0249  cell envelope-related transcriptional attenuator  30.83 
 
 
461 aa  89.4  1e-16  Roseiflexus sp. RS-1  Bacteria  normal  0.176246  normal  0.0400211 
 
 
-
 
NC_011831  Cagg_3186  cell envelope-related transcriptional attenuator  28.83 
 
 
451 aa  89.4  1e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.689692 
 
 
-
 
NC_009767  Rcas_0015  cell envelope-related transcriptional attenuator  31.37 
 
 
503 aa  89  2e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0348648  hitchhiker  0.0000779954 
 
 
-
 
NC_009767  Rcas_1996  cell envelope-related transcriptional attenuator  30.33 
 
 
527 aa  88.2  3e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.177975 
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  24.84 
 
 
335 aa  87.8  4e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  25.21 
 
 
329 aa  86.3  0.000000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  25.76 
 
 
304 aa  85.1  0.000000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_008148  Rxyl_1540  cell envelope-related transcriptional attenuator  30.09 
 
 
328 aa  85.1  0.000000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.112437  n/a   
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  25.33 
 
 
302 aa  84.3  0.000000000000005  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  24.79 
 
 
317 aa  82.8  0.00000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4519  cell envelope-related transcriptional attenuator  31.84 
 
 
505 aa  80.1  0.00000000000007  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1433  cell envelope-related transcriptional attenuator  27.1 
 
 
332 aa  79.7  0.0000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011658  BCAH187_A5436  membrane-bound transcriptional regulator LytR  25.76 
 
 
302 aa  79.7  0.0000000000001  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  25.1 
 
 
411 aa  79.3  0.0000000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3796  membrane-bound transcriptional regulator LytR  24.45 
 
 
302 aa  79.7  0.0000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.0000323774  n/a   
 
 
-
 
NC_009972  Haur_4851  cell envelope-related transcriptional attenuator  28.81 
 
 
432 aa  78.6  0.0000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  24.89 
 
 
299 aa  78.6  0.0000000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  26.71 
 
 
319 aa  77.8  0.0000000000005  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_010184  BcerKBAB4_5058  membrane-bound transcriptional regulator LytR  24.45 
 
 
304 aa  77.4  0.0000000000005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  30.62 
 
 
465 aa  77.4  0.0000000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_011831  Cagg_1876  cell envelope-related transcriptional attenuator  27.78 
 
 
455 aa  77.4  0.0000000000006  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000275813  normal 
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  21.4 
 
 
337 aa  76.6  0.0000000000009  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1700  cell envelope-related transcriptional attenuator  30.04 
 
 
463 aa  76.6  0.0000000000009  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.55383  normal 
 
 
-
 
NC_013411  GYMC61_3385  membrane-bound transcriptional regulator LytR  24.91 
 
 
313 aa  76.3  0.000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_08580  cell envelope-related function transcriptional attenuator common domain protein  26.82 
 
 
396 aa  76.3  0.000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.783991  normal  0.393457 
 
 
-
 
NC_011773  BCAH820_5355  membrane-bound transcriptional regulator LytR  25.22 
 
 
303 aa  75.9  0.000000000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  21.75 
 
 
338 aa  75.9  0.000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  24.02 
 
 
304 aa  75.9  0.000000000002  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4695  transcription antiterminator, LytR family  21.43 
 
 
338 aa  75.1  0.000000000002  Bacillus cereus G9842  Bacteria  normal  0.541641  hitchhiker  0.0000000308245 
 
 
-
 
NC_009523  RoseRS_1714  cell envelope-related transcriptional attenuator  30.7 
 
 
528 aa  75.9  0.000000000002  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.603952 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  27.94 
 
 
505 aa  75.1  0.000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_005945  BAS5115  membrane-bound transcriptional regulator LytR  24.78 
 
 
303 aa  74.7  0.000000000003  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0643  transcription antiterminator, LytR family  22.22 
 
 
338 aa  75.1  0.000000000003  Bacillus cereus B4264  Bacteria  normal  0.849345  n/a   
 
 
-
 
NC_006274  BCZK4961  membrane-bound transcriptional regulator LytR  24.78 
 
 
303 aa  75.1  0.000000000003  Bacillus cereus E33L  Bacteria  normal  0.0205697  n/a   
 
 
-
 
NC_007530  GBAA_5506  membrane-bound transcriptional regulator LytR  24.78 
 
 
303 aa  74.7  0.000000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00691653  n/a   
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  21.4 
 
 
337 aa  74.3  0.000000000004  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0516  LytR family transcriptional regulator  21.4 
 
 
337 aa  74.7  0.000000000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  21.4 
 
 
333 aa  74.7  0.000000000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0489  transcription regulator  24.22 
 
 
450 aa  74.3  0.000000000004  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  21.4 
 
 
338 aa  74.3  0.000000000004  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_002976  SERP1893  transcriptional regulator, putative  25.22 
 
 
316 aa  74.3  0.000000000005  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  25.09 
 
 
478 aa  74.3  0.000000000005  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  21.4 
 
 
338 aa  73.9  0.000000000006  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0368  hypothetical protein  22.54 
 
 
435 aa  73.9  0.000000000006  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2334  cell envelope-related transcriptional attenuator  23.29 
 
 
318 aa  73.9  0.000000000006  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.591324  n/a   
 
 
-
 
NC_009632  SaurJH1_2377  transcription attenuator LytR  23.29 
 
 
318 aa  73.9  0.000000000006  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_3081  cell envelope-related transcriptional attenuator  28.99 
 
 
531 aa  73.6  0.000000000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0516  LytR family transcriptional regulator  21.05 
 
 
337 aa  73.2  0.00000000001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  28.81 
 
 
506 aa  72.8  0.00000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  26.18 
 
 
445 aa  72.8  0.00000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  30.52 
 
 
504 aa  72.4  0.00000000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  29.15 
 
 
414 aa  72.4  0.00000000002  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  21.43 
 
 
322 aa  72  0.00000000002  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  21.37 
 
 
337 aa  72  0.00000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  25.33 
 
 
419 aa  72  0.00000000003  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  24.41 
 
 
406 aa  71.2  0.00000000004  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_008532  STER_0378  transcriptional regulator  25.09 
 
 
408 aa  71.2  0.00000000004  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0016641  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  26.03 
 
 
418 aa  70.9  0.00000000005  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  24.54 
 
 
380 aa  70.9  0.00000000005  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  24.89 
 
 
310 aa  70.5  0.00000000006  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  26.67 
 
 
405 aa  70.5  0.00000000006  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  26.25 
 
 
442 aa  70.5  0.00000000007  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  22.87 
 
 
308 aa  70.1  0.00000000008  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  25.55 
 
 
377 aa  70.1  0.00000000008  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  25.99 
 
 
377 aa  69.3  0.0000000001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  28.85 
 
 
420 aa  69.3  0.0000000001  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  28.06 
 
 
468 aa  69.7  0.0000000001  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  30.84 
 
 
320 aa  68.6  0.0000000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>