More than 300 homologs were found in PanDaTox collection
for query gene Tbis_2169 on replicon NC_014165
Organism: Thermobispora bispora DSM 43833



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014165  Tbis_2169  cell envelope-related transcriptional attenuator  100 
 
 
504 aa  995    Thermobispora bispora DSM 43833  Bacteria  normal  0.188939  normal 
 
 
-
 
NC_013595  Sros_6456  Transcriptional regulator-like protein  58.66 
 
 
543 aa  492  9.999999999999999e-139  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.00855962 
 
 
-
 
NC_014165  Tbis_1877  cell envelope-related transcriptional attenuator  47.25 
 
 
539 aa  382  1e-105  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.801543 
 
 
-
 
NC_013595  Sros_3414  Transcriptional regulator-like protein  44.2 
 
 
609 aa  352  7e-96  Streptosporangium roseum DSM 43021  Bacteria  normal  0.442542  normal  0.390313 
 
 
-
 
NC_013595  Sros_9275  Transcriptional regulator-like protein  43.38 
 
 
457 aa  327  4.0000000000000003e-88  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2629  cell envelope-related transcriptional attenuator  46.26 
 
 
496 aa  321  1.9999999999999998e-86  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000175757  n/a   
 
 
-
 
NC_007333  Tfu_0017  cell envelope-related transcriptional attenuator  41.52 
 
 
472 aa  295  9e-79  Thermobifida fusca YX  Bacteria  hitchhiker  0.00643877  n/a   
 
 
-
 
NC_007333  Tfu_1372  cell envelope-related transcriptional attenuator  38.1 
 
 
490 aa  294  2e-78  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1419  cell envelope-related transcriptional attenuator  36.81 
 
 
511 aa  267  4e-70  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.327426  normal 
 
 
-
 
NC_008699  Noca_1398  cell envelope-related transcriptional attenuator  35.62 
 
 
481 aa  234  3e-60  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4982  cell envelope-related transcriptional attenuator  37.47 
 
 
523 aa  214  2.9999999999999995e-54  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_26120  cell envelope-related function transcriptional attenuator common domain protein  33.55 
 
 
497 aa  213  9e-54  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_09180  cell envelope-related function transcriptional attenuator common domain  33.33 
 
 
791 aa  207  5e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2614  cell envelope-related transcriptional attenuator  34.05 
 
 
508 aa  194  3e-48  Nocardioides sp. JS614  Bacteria  normal  0.235431  n/a   
 
 
-
 
NC_012803  Mlut_05220  cell envelope-related function transcriptional attenuator common domain protein  36.34 
 
 
537 aa  194  4e-48  Micrococcus luteus NCTC 2665  Bacteria  normal  0.855799  n/a   
 
 
-
 
NC_008541  Arth_1187  cell envelope-related transcriptional attenuator  32.68 
 
 
546 aa  194  4e-48  Arthrobacter sp. FB24  Bacteria  normal  0.208279  n/a   
 
 
-
 
NC_011886  Achl_1258  cell envelope-related transcriptional attenuator  31.5 
 
 
549 aa  187  4e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000145407 
 
 
-
 
NC_009767  Rcas_0015  cell envelope-related transcriptional attenuator  31.02 
 
 
503 aa  87  7e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0348648  hitchhiker  0.0000779954 
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  27.52 
 
 
356 aa  85.9  0.000000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  27.31 
 
 
353 aa  84.7  0.000000000000003  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_009972  Haur_1198  cell envelope-related transcriptional attenuator  27.42 
 
 
585 aa  81.6  0.00000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  30.09 
 
 
377 aa  81.3  0.00000000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_4519  cell envelope-related transcriptional attenuator  30.61 
 
 
505 aa  80.9  0.00000000000005  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3430  cell envelope-related transcriptional attenuator  29.9 
 
 
439 aa  79.7  0.0000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0225853  n/a   
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  29.28 
 
 
407 aa  77  0.0000000000007  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  26.78 
 
 
419 aa  77  0.0000000000007  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  25.2 
 
 
426 aa  75.1  0.000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  20.63 
 
 
322 aa  74.7  0.000000000004  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  28.27 
 
 
344 aa  72.8  0.00000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  28.21 
 
 
445 aa  73.2  0.00000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  26.25 
 
 
453 aa  72.4  0.00000000002  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_008148  Rxyl_1540  cell envelope-related transcriptional attenuator  29.88 
 
 
328 aa  72.4  0.00000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.112437  n/a   
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  23.92 
 
 
411 aa  72.4  0.00000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1714  cell envelope-related transcriptional attenuator  30.34 
 
 
528 aa  71.6  0.00000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.603952 
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  23.91 
 
 
406 aa  71.6  0.00000000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_009767  Rcas_1996  cell envelope-related transcriptional attenuator  29.92 
 
 
527 aa  72  0.00000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.177975 
 
 
-
 
NC_011831  Cagg_1876  cell envelope-related transcriptional attenuator  26.12 
 
 
455 aa  70.5  0.00000000006  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000275813  normal 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  29.46 
 
 
509 aa  70.5  0.00000000007  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  25.27 
 
 
317 aa  69.7  0.0000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  23.91 
 
 
506 aa  69.7  0.0000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  27.71 
 
 
465 aa  69.7  0.0000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  24.82 
 
 
521 aa  68.6  0.0000000002  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  31.06 
 
 
307 aa  68.2  0.0000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  25.09 
 
 
383 aa  68.2  0.0000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  31.67 
 
 
505 aa  67.8  0.0000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  23.89 
 
 
400 aa  67.4  0.0000000006  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2383  cell envelope-related transcriptional attenuator  27.27 
 
 
389 aa  67  0.0000000007  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0868762  hitchhiker  0.00772059 
 
 
-
 
NC_011831  Cagg_3226  cell envelope-related transcriptional attenuator  27.38 
 
 
370 aa  67  0.0000000007  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.501586 
 
 
-
 
NC_011831  Cagg_3186  cell envelope-related transcriptional attenuator  30.29 
 
 
451 aa  67  0.0000000007  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.689692 
 
 
-
 
NC_013174  Jden_1864  cell envelope-related transcriptional attenuator  24.76 
 
 
391 aa  66.6  0.0000000009  Jonesia denitrificans DSM 20603  Bacteria  normal  0.383316  normal  0.036217 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  22.64 
 
 
478 aa  66.6  0.000000001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  23.94 
 
 
480 aa  66.6  0.000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_009767  Rcas_0287  cell envelope-related transcriptional attenuator  31.68 
 
 
412 aa  65.5  0.000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008532  STER_0378  transcriptional regulator  30.77 
 
 
408 aa  65.9  0.000000002  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0016641  n/a   
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  24.26 
 
 
521 aa  65.1  0.000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  28.91 
 
 
504 aa  64.7  0.000000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  24.71 
 
 
310 aa  65.1  0.000000003  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  23.73 
 
 
380 aa  64.7  0.000000004  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_008527  LACR_0489  transcription regulator  22.9 
 
 
450 aa  64.7  0.000000004  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2090  cell envelope-related transcriptional attenuator  24.29 
 
 
417 aa  64.3  0.000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  28.1 
 
 
497 aa  64.3  0.000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  24.14 
 
 
405 aa  63.9  0.000000006  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  27.27 
 
 
406 aa  63.9  0.000000006  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_008312  Tery_2604  cell envelope-related transcriptional attenuator  32 
 
 
471 aa  63.9  0.000000007  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.22991 
 
 
-
 
NC_011729  PCC7424_2873  cell envelope-related transcriptional attenuator  31.72 
 
 
475 aa  63.5  0.000000008  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  23.67 
 
 
377 aa  63.5  0.000000008  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0368  hypothetical protein  28.46 
 
 
435 aa  63.2  0.00000001  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  24.08 
 
 
375 aa  63.2  0.00000001  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  24.08 
 
 
375 aa  63.2  0.00000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  24.08 
 
 
375 aa  63.2  0.00000001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4851  cell envelope-related transcriptional attenuator  26.37 
 
 
432 aa  63.2  0.00000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  31.68 
 
 
549 aa  62.8  0.00000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08580  cell envelope-related function transcriptional attenuator common domain protein  26.71 
 
 
396 aa  63.2  0.00000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.783991  normal  0.393457 
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  24.08 
 
 
375 aa  63.2  0.00000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0249  cell envelope-related transcriptional attenuator  30.2 
 
 
461 aa  62.8  0.00000001  Roseiflexus sp. RS-1  Bacteria  normal  0.176246  normal  0.0400211 
 
 
-
 
NC_008532  STER_1071  transcriptional activator-exopolysaccharide biosynthesis  27.61 
 
 
486 aa  62.8  0.00000001  Streptococcus thermophilus LMD-9  Bacteria  normal  0.903122  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  23.77 
 
 
377 aa  62.4  0.00000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  24.08 
 
 
375 aa  62  0.00000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_009513  Lreu_1057  cell envelope-related transcriptional attenuator  27.34 
 
 
333 aa  62  0.00000002  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.0371332  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  27.34 
 
 
319 aa  62.4  0.00000002  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  26.01 
 
 
418 aa  62.4  0.00000002  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_009953  Sare_5021  cell envelope-related transcriptional attenuator  27.47 
 
 
312 aa  62.4  0.00000002  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00237783 
 
 
-
 
NC_013411  GYMC61_3385  membrane-bound transcriptional regulator LytR  26.54 
 
 
313 aa  61.6  0.00000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008531  LEUM_1851  transcriptional regulator  24.39 
 
 
392 aa  61.6  0.00000003  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  21.22 
 
 
333 aa  61.2  0.00000004  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_009674  Bcer98_3796  membrane-bound transcriptional regulator LytR  22.09 
 
 
302 aa  61.2  0.00000004  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.0000323774  n/a   
 
 
-
 
NC_009487  SaurJH9_1423  cell envelope-related transcriptional attenuator  26.09 
 
 
327 aa  61.2  0.00000004  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.302612  n/a   
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  25.48 
 
 
335 aa  61.6  0.00000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_1700  cell envelope-related transcriptional attenuator  27.34 
 
 
463 aa  61.2  0.00000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.55383  normal 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  26.84 
 
 
336 aa  61.2  0.00000004  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_009632  SaurJH1_1451  transcription attenuator LytR  26.09 
 
 
327 aa  61.2  0.00000004  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2378  cell envelope-related function transcriptional attenuator  25.09 
 
 
437 aa  60.8  0.00000005  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0983623  n/a   
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  21.22 
 
 
333 aa  60.5  0.00000006  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  21.22 
 
 
333 aa  60.5  0.00000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  21.22 
 
 
335 aa  60.5  0.00000006  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  21.22 
 
 
333 aa  60.5  0.00000006  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2090  transcription regulator LytR-like protein  24.74 
 
 
437 aa  60.5  0.00000006  Clostridium perfringens SM101  Bacteria  normal  0.853394  n/a   
 
 
-
 
NC_008530  LGAS_1157  transcriptional regulator  24.8 
 
 
334 aa  60.8  0.00000006  Lactobacillus gasseri ATCC 33323  Bacteria  unclonable  0.000000000000266671  hitchhiker  6.72858e-19 
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  21.22 
 
 
333 aa  60.5  0.00000006  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  26.64 
 
 
320 aa  60.5  0.00000007  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
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