297 homologs were found in PanDaTox collection
for query gene Arth_1187 on replicon NC_008541
Organism: Arthrobacter sp. FB24



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011886  Achl_1258  cell envelope-related transcriptional attenuator  75.72 
 
 
549 aa  818    Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000145407 
 
 
-
 
NC_008541  Arth_1187  cell envelope-related transcriptional attenuator  100 
 
 
546 aa  1102    Arthrobacter sp. FB24  Bacteria  normal  0.208279  n/a   
 
 
-
 
NC_012803  Mlut_05220  cell envelope-related function transcriptional attenuator common domain protein  46.77 
 
 
537 aa  432  1e-120  Micrococcus luteus NCTC 2665  Bacteria  normal  0.855799  n/a   
 
 
-
 
NC_008699  Noca_1398  cell envelope-related transcriptional attenuator  36.92 
 
 
481 aa  275  1.0000000000000001e-72  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_26120  cell envelope-related function transcriptional attenuator common domain protein  35.11 
 
 
497 aa  238  2e-61  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1877  cell envelope-related transcriptional attenuator  34.01 
 
 
539 aa  217  5e-55  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.801543 
 
 
-
 
NC_013595  Sros_3414  Transcriptional regulator-like protein  32.64 
 
 
609 aa  213  9e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.442542  normal  0.390313 
 
 
-
 
NC_013595  Sros_6456  Transcriptional regulator-like protein  35.27 
 
 
543 aa  210  6e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.00855962 
 
 
-
 
NC_007333  Tfu_1372  cell envelope-related transcriptional attenuator  30.63 
 
 
490 aa  205  2e-51  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09180  cell envelope-related function transcriptional attenuator common domain  32.21 
 
 
791 aa  199  1.0000000000000001e-49  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2169  cell envelope-related transcriptional attenuator  33.99 
 
 
504 aa  194  5e-48  Thermobispora bispora DSM 43833  Bacteria  normal  0.188939  normal 
 
 
-
 
NC_007333  Tfu_0017  cell envelope-related transcriptional attenuator  31.63 
 
 
472 aa  192  1e-47  Thermobifida fusca YX  Bacteria  hitchhiker  0.00643877  n/a   
 
 
-
 
NC_013595  Sros_9275  Transcriptional regulator-like protein  31.93 
 
 
457 aa  192  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1419  cell envelope-related transcriptional attenuator  29.64 
 
 
511 aa  191  4e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.327426  normal 
 
 
-
 
NC_013510  Tcur_2629  cell envelope-related transcriptional attenuator  34.55 
 
 
496 aa  186  1.0000000000000001e-45  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000175757  n/a   
 
 
-
 
NC_008699  Noca_2614  cell envelope-related transcriptional attenuator  33.7 
 
 
508 aa  169  1e-40  Nocardioides sp. JS614  Bacteria  normal  0.235431  n/a   
 
 
-
 
NC_013757  Gobs_4982  cell envelope-related transcriptional attenuator  34.85 
 
 
523 aa  166  1.0000000000000001e-39  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  25.37 
 
 
411 aa  87.4  5e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1198  cell envelope-related transcriptional attenuator  31.56 
 
 
585 aa  85.1  0.000000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  27.27 
 
 
317 aa  83.2  0.00000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  24.18 
 
 
322 aa  81.3  0.00000000000005  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  27.54 
 
 
453 aa  79  0.0000000000002  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_008312  Tery_2604  cell envelope-related transcriptional attenuator  27.78 
 
 
471 aa  79  0.0000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.22991 
 
 
-
 
NC_013525  Tter_1433  cell envelope-related transcriptional attenuator  29.24 
 
 
332 aa  78.6  0.0000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  25.75 
 
 
419 aa  78.2  0.0000000000003  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  25.85 
 
 
356 aa  77.8  0.0000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  26.19 
 
 
353 aa  77.4  0.0000000000006  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  24.43 
 
 
338 aa  77.4  0.0000000000006  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  24.93 
 
 
335 aa  76.6  0.000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  30 
 
 
405 aa  76.3  0.000000000001  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  27.05 
 
 
436 aa  75.5  0.000000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  24.11 
 
 
333 aa  75.9  0.000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_009012  Cthe_0727  cell envelope-related transcriptional attenuator  23.64 
 
 
308 aa  75.5  0.000000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0775994  n/a   
 
 
-
 
NC_011725  BCB4264_A1975  transcription antiterminator, LytR family  24.11 
 
 
333 aa  75.5  0.000000000002  Bacillus cereus B4264  Bacteria  normal  0.258453  n/a   
 
 
-
 
NC_007413  Ava_0411  cell envelope-like transcriptional attenuator  26.71 
 
 
472 aa  75.1  0.000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.207765 
 
 
-
 
NC_011772  BCG9842_B3352  transcription antiterminator, LytR family  24.11 
 
 
335 aa  75.1  0.000000000003  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000199263  hitchhiker  0.0000000000000086496 
 
 
-
 
NC_011726  PCC8801_1109  cell envelope-related transcriptional attenuator  27.47 
 
 
481 aa  75.5  0.000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1138  cell envelope-related transcriptional attenuator  27.47 
 
 
481 aa  75.5  0.000000000003  Cyanothece sp. PCC 8802  Bacteria  normal  0.441684  normal 
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  26.32 
 
 
338 aa  75.1  0.000000000003  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  24.11 
 
 
337 aa  74.7  0.000000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4695  transcription antiterminator, LytR family  23.96 
 
 
338 aa  74.7  0.000000000004  Bacillus cereus G9842  Bacteria  normal  0.541641  hitchhiker  0.0000000308245 
 
 
-
 
NC_011725  BCB4264_A0643  transcription antiterminator, LytR family  25.91 
 
 
338 aa  74.3  0.000000000005  Bacillus cereus B4264  Bacteria  normal  0.849345  n/a   
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  24.11 
 
 
333 aa  74.3  0.000000000006  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_005957  BT9727_0516  LytR family transcriptional regulator  25.6 
 
 
337 aa  73.9  0.000000000007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  25.91 
 
 
338 aa  73.6  0.000000000008  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_014248  Aazo_3223  cell envelope-like transcriptional attenuator  30.15 
 
 
471 aa  73.6  0.000000000008  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1996  cell envelope-related transcriptional attenuator  28.95 
 
 
527 aa  73.6  0.000000000008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.177975 
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  25.6 
 
 
337 aa  73.6  0.000000000009  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0516  LytR family transcriptional regulator  25.6 
 
 
337 aa  73.6  0.000000000009  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  24.1 
 
 
335 aa  73.6  0.000000000009  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3698  transcription antiterminator, LytR family  24.5 
 
 
345 aa  73.6  0.000000000009  Bacillus cereus B4264  Bacteria  hitchhiker  0.00180581  n/a   
 
 
-
 
NC_011831  Cagg_3186  cell envelope-related transcriptional attenuator  33.49 
 
 
451 aa  73.6  0.000000000009  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.689692 
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  25.6 
 
 
337 aa  73.2  0.00000000001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  24.1 
 
 
333 aa  73.6  0.00000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  24.1 
 
 
333 aa  73.6  0.00000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  25.91 
 
 
333 aa  73.6  0.00000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  24.1 
 
 
333 aa  73.6  0.00000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1619  transcription antiterminator, LytR family  24.17 
 
 
345 aa  73.2  0.00000000001  Bacillus cereus G9842  Bacteria  hitchhiker  0.00116574  hitchhiker  0.0000348163 
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  24.1 
 
 
333 aa  73.6  0.00000000001  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_005945  BAS3381  LytR family transcription antiterminator  24.17 
 
 
345 aa  72.4  0.00000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.288134  n/a   
 
 
-
 
NC_007530  GBAA_3647  LytR family transcription antiterminator  24.17 
 
 
345 aa  72.4  0.00000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0513784  n/a   
 
 
-
 
NC_011729  PCC7424_2873  cell envelope-related transcriptional attenuator  29.06 
 
 
475 aa  72.8  0.00000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A2078  transcription antiterminator, LytR family  23.76 
 
 
333 aa  72.8  0.00000000002  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000542577  n/a   
 
 
-
 
NC_011773  BCAH820_3598  transcription antiterminator, LytR family  24.17 
 
 
345 aa  72.4  0.00000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000000156827 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  26.83 
 
 
445 aa  71.6  0.00000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  24.93 
 
 
308 aa  71.6  0.00000000004  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  27.12 
 
 
563 aa  71.6  0.00000000004  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_009523  RoseRS_1714  cell envelope-related transcriptional attenuator  28.52 
 
 
528 aa  71.2  0.00000000004  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.603952 
 
 
-
 
NC_006274  BCZK3295  transcriptional regulator LytR, attenuator for lytABC and lytR expression  23.51 
 
 
345 aa  70.9  0.00000000005  Bacillus cereus E33L  Bacteria  normal  0.189328  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  28.03 
 
 
506 aa  70.1  0.00000000009  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  25.9 
 
 
329 aa  69.7  0.0000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_005957  BT9727_3347  transcriptional regulator LytR, attenuator for lytABC and lytR expression  23.84 
 
 
345 aa  69.7  0.0000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000255205  n/a   
 
 
-
 
NC_008261  CPF_2170  cell envelope-related function transcriptional attenuator  27.71 
 
 
473 aa  69.7  0.0000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.582429  n/a   
 
 
-
 
NC_008262  CPR_1881  cell envelope-related function transcriptional attenuator  27.46 
 
 
460 aa  70.1  0.0000000001  Clostridium perfringens SM101  Bacteria  normal  0.723477  n/a   
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  27.07 
 
 
304 aa  69.3  0.0000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_011772  BCG9842_B4498  transcription antiterminator, LytR family  25.32 
 
 
399 aa  68.9  0.0000000002  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0000000000182536 
 
 
-
 
NC_009767  Rcas_0015  cell envelope-related transcriptional attenuator  27.38 
 
 
503 aa  68.9  0.0000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0348648  hitchhiker  0.0000779954 
 
 
-
 
NC_011658  BCAH187_A3613  transcription antiterminator, LytR family  23.18 
 
 
345 aa  68.9  0.0000000002  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000276906  n/a   
 
 
-
 
NC_009487  SaurJH9_2334  cell envelope-related transcriptional attenuator  21.43 
 
 
318 aa  68.2  0.0000000004  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.591324  n/a   
 
 
-
 
NC_009632  SaurJH1_2377  transcription attenuator LytR  21.43 
 
 
318 aa  68.2  0.0000000004  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3273  cell envelope-related transcriptional attenuator  23.84 
 
 
345 aa  68.2  0.0000000004  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00000492202  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5058  membrane-bound transcriptional regulator LytR  27.07 
 
 
304 aa  67.8  0.0000000004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  24.03 
 
 
377 aa  67.8  0.0000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  27.07 
 
 
302 aa  67.8  0.0000000005  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3605  LytR family transcription antiterminator  22.85 
 
 
345 aa  67.4  0.0000000006  Bacillus cereus ATCC 10987  Bacteria  normal  0.0149783  n/a   
 
 
-
 
NC_006274  BCZK0680  LytR family transcriptional regulator  26.24 
 
 
398 aa  67.4  0.0000000007  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0838  transcription antiterminator, LytR family  25 
 
 
399 aa  67.4  0.0000000007  Bacillus cereus B4264  Bacteria  hitchhiker  0.00382216  n/a   
 
 
-
 
NC_003909  BCE_0875  LytR family transcription antiterminator  24.37 
 
 
400 aa  67  0.0000000008  Bacillus cereus ATCC 10987  Bacteria  normal  0.0676567  n/a   
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  26.64 
 
 
299 aa  67  0.0000000008  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  27.36 
 
 
418 aa  67  0.0000000008  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  26.71 
 
 
480 aa  67  0.0000000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_008025  Dgeo_0132  cell envelope-related transcriptional attenuator  27.59 
 
 
426 aa  66.6  0.000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.272824  normal 
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  28.04 
 
 
406 aa  66.6  0.000000001  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_005945  BAS0746  LytR family transcription antiterminator  25.86 
 
 
398 aa  65.9  0.000000002  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0694  LytR family transcriptional regulator  25.86 
 
 
398 aa  65.9  0.000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0354301  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0694  cell envelope-related transcriptional attenuator  25.57 
 
 
401 aa  65.5  0.000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.12922  n/a   
 
 
-
 
NC_007530  GBAA_0783  LytR family transcription antiterminator  25.86 
 
 
398 aa  65.9  0.000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0878  transcription antiterminator, LytR family  25.86 
 
 
398 aa  65.9  0.000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.78734e-21 
 
 
-
 
NC_008527  LACR_0489  transcription regulator  24.79 
 
 
450 aa  65.9  0.000000002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1876  cell envelope-related transcriptional attenuator  24.71 
 
 
455 aa  65.5  0.000000002  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000275813  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>