299 homologs were found in PanDaTox collection
for query gene Ndas_1419 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_1419  cell envelope-related transcriptional attenuator  100 
 
 
511 aa  1026    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.327426  normal 
 
 
-
 
NC_007333  Tfu_1372  cell envelope-related transcriptional attenuator  56.92 
 
 
490 aa  509  1e-143  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0017  cell envelope-related transcriptional attenuator  49.5 
 
 
472 aa  450  1e-125  Thermobifida fusca YX  Bacteria  hitchhiker  0.00643877  n/a   
 
 
-
 
NC_013595  Sros_9275  Transcriptional regulator-like protein  41.25 
 
 
457 aa  313  2.9999999999999996e-84  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2629  cell envelope-related transcriptional attenuator  43.49 
 
 
496 aa  308  1.0000000000000001e-82  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000175757  n/a   
 
 
-
 
NC_014165  Tbis_1877  cell envelope-related transcriptional attenuator  37.76 
 
 
539 aa  293  4e-78  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.801543 
 
 
-
 
NC_013595  Sros_3414  Transcriptional regulator-like protein  37.9 
 
 
609 aa  278  2e-73  Streptosporangium roseum DSM 43021  Bacteria  normal  0.442542  normal  0.390313 
 
 
-
 
NC_013595  Sros_6456  Transcriptional regulator-like protein  38.43 
 
 
543 aa  271  2e-71  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.00855962 
 
 
-
 
NC_014165  Tbis_2169  cell envelope-related transcriptional attenuator  36.81 
 
 
504 aa  263  4e-69  Thermobispora bispora DSM 43833  Bacteria  normal  0.188939  normal 
 
 
-
 
NC_008699  Noca_1398  cell envelope-related transcriptional attenuator  35.66 
 
 
481 aa  231  2e-59  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09180  cell envelope-related function transcriptional attenuator common domain  36.86 
 
 
791 aa  230  4e-59  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_26120  cell envelope-related function transcriptional attenuator common domain protein  36.44 
 
 
497 aa  224  3e-57  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2614  cell envelope-related transcriptional attenuator  37.03 
 
 
508 aa  205  2e-51  Nocardioides sp. JS614  Bacteria  normal  0.235431  n/a   
 
 
-
 
NC_013757  Gobs_4982  cell envelope-related transcriptional attenuator  36.48 
 
 
523 aa  191  4e-47  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_05220  cell envelope-related function transcriptional attenuator common domain protein  34.15 
 
 
537 aa  189  8e-47  Micrococcus luteus NCTC 2665  Bacteria  normal  0.855799  n/a   
 
 
-
 
NC_008541  Arth_1187  cell envelope-related transcriptional attenuator  29.38 
 
 
546 aa  181  2e-44  Arthrobacter sp. FB24  Bacteria  normal  0.208279  n/a   
 
 
-
 
NC_011886  Achl_1258  cell envelope-related transcriptional attenuator  30.65 
 
 
549 aa  166  6.9999999999999995e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000145407 
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  28.93 
 
 
377 aa  86.7  8e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_1198  cell envelope-related transcriptional attenuator  28.26 
 
 
585 aa  83.2  0.00000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  25.82 
 
 
304 aa  81.6  0.00000000000003  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  25.32 
 
 
419 aa  82  0.00000000000003  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  25.39 
 
 
304 aa  80.5  0.00000000000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  24.35 
 
 
302 aa  80.1  0.00000000000009  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0368  hypothetical protein  25.56 
 
 
435 aa  79.3  0.0000000000001  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  24.7 
 
 
299 aa  78.6  0.0000000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_0378  transcriptional regulator  27.23 
 
 
408 aa  78.2  0.0000000000003  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0016641  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  28.57 
 
 
506 aa  77  0.0000000000007  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  30.74 
 
 
480 aa  77  0.0000000000008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  28.21 
 
 
453 aa  76.3  0.000000000001  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  28.25 
 
 
406 aa  76.3  0.000000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  25.44 
 
 
353 aa  75.5  0.000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_011831  Cagg_3186  cell envelope-related transcriptional attenuator  30.05 
 
 
451 aa  75.1  0.000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.689692 
 
 
-
 
NC_011773  BCAH820_5355  membrane-bound transcriptional regulator LytR  24.63 
 
 
303 aa  74.7  0.000000000003  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  24.81 
 
 
310 aa  74.7  0.000000000003  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  30 
 
 
344 aa  74.7  0.000000000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_011831  Cagg_1700  cell envelope-related transcriptional attenuator  28.91 
 
 
463 aa  74.7  0.000000000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.55383  normal 
 
 
-
 
NC_009767  Rcas_0287  cell envelope-related transcriptional attenuator  29.5 
 
 
412 aa  74.3  0.000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS5115  membrane-bound transcriptional regulator LytR  24.26 
 
 
303 aa  73.6  0.000000000009  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4961  membrane-bound transcriptional regulator LytR  24.26 
 
 
303 aa  73.6  0.000000000009  Bacillus cereus E33L  Bacteria  normal  0.0205697  n/a   
 
 
-
 
NC_007530  GBAA_5506  membrane-bound transcriptional regulator LytR  24.26 
 
 
303 aa  73.6  0.000000000009  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00691653  n/a   
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  31 
 
 
400 aa  73.6  0.000000000009  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0249  cell envelope-related transcriptional attenuator  25.68 
 
 
461 aa  73.2  0.00000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.176246  normal  0.0400211 
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  25.6 
 
 
411 aa  72  0.00000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5058  membrane-bound transcriptional regulator LytR  24.51 
 
 
304 aa  72.4  0.00000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  23.36 
 
 
356 aa  72  0.00000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  26.69 
 
 
584 aa  72  0.00000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  27.8 
 
 
504 aa  71.6  0.00000000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  23.18 
 
 
322 aa  71.2  0.00000000004  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  24.71 
 
 
317 aa  71.2  0.00000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2383  cell envelope-related transcriptional attenuator  28.32 
 
 
389 aa  70.9  0.00000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0868762  hitchhiker  0.00772059 
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  27.04 
 
 
490 aa  70.9  0.00000000005  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  27.04 
 
 
490 aa  70.9  0.00000000005  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  27.04 
 
 
490 aa  70.9  0.00000000005  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_013411  GYMC61_3385  membrane-bound transcriptional regulator LytR  23.2 
 
 
313 aa  70.5  0.00000000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  25.59 
 
 
481 aa  70.5  0.00000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_011658  BCAH187_A5436  membrane-bound transcriptional regulator LytR  23.51 
 
 
302 aa  70.5  0.00000000007  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1996  cell envelope-related transcriptional attenuator  29.41 
 
 
527 aa  70.1  0.00000000008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.177975 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  25.62 
 
 
468 aa  69.7  0.0000000001  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08580  cell envelope-related function transcriptional attenuator common domain protein  27.27 
 
 
396 aa  69.3  0.0000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.783991  normal  0.393457 
 
 
-
 
NC_009674  Bcer98_3796  membrane-bound transcriptional regulator LytR  24.22 
 
 
302 aa  68.9  0.0000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.0000323774  n/a   
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  27.04 
 
 
493 aa  68.6  0.0000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_1352  cell envelope-related transcriptional attenuator  24.82 
 
 
488 aa  68.2  0.0000000003  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00278352  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  25.73 
 
 
453 aa  68.2  0.0000000003  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  25.13 
 
 
426 aa  68.2  0.0000000003  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  27.37 
 
 
417 aa  68.6  0.0000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5087  cell envelope-related transcriptional attenuator  31.72 
 
 
687 aa  68.6  0.0000000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  26.97 
 
 
405 aa  68.2  0.0000000004  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_013174  Jden_1864  cell envelope-related transcriptional attenuator  27.5 
 
 
391 aa  67.8  0.0000000004  Jonesia denitrificans DSM 20603  Bacteria  normal  0.383316  normal  0.036217 
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  28.23 
 
 
512 aa  67.4  0.0000000005  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  26.09 
 
 
308 aa  67.8  0.0000000005  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_011830  Dhaf_3430  cell envelope-related transcriptional attenuator  26.6 
 
 
439 aa  67  0.0000000007  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0225853  n/a   
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  23.72 
 
 
499 aa  67  0.0000000007  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  26.27 
 
 
619 aa  66.6  0.000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  26.05 
 
 
521 aa  66.6  0.000000001  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  24.11 
 
 
372 aa  65.9  0.000000002  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  26.34 
 
 
465 aa  65.5  0.000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  24.6 
 
 
487 aa  65.5  0.000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_008530  LGAS_0174  transcriptional regulator  25.4 
 
 
374 aa  65.5  0.000000002  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.0565386  hitchhiker  0.0000000000000158467 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  24.73 
 
 
618 aa  65.9  0.000000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  25.66 
 
 
377 aa  65.1  0.000000003  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  24.9 
 
 
375 aa  65.1  0.000000003  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  24.9 
 
 
375 aa  64.7  0.000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  24.9 
 
 
375 aa  64.7  0.000000003  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  24.9 
 
 
375 aa  65.1  0.000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  24.76 
 
 
442 aa  65.1  0.000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  22.88 
 
 
445 aa  65.1  0.000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  33.59 
 
 
406 aa  65.1  0.000000003  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_013739  Cwoe_4615  cell envelope-related transcriptional attenuator  25.16 
 
 
510 aa  65.1  0.000000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP1893  transcriptional regulator, putative  24.18 
 
 
316 aa  64.7  0.000000004  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  25.66 
 
 
374 aa  64.3  0.000000004  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1876  cell envelope-related transcriptional attenuator  25.28 
 
 
455 aa  64.7  0.000000004  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000275813  normal 
 
 
-
 
NC_008531  LEUM_0961  transcriptional regulator  23.13 
 
 
410 aa  64.3  0.000000004  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0015  cell envelope-related transcriptional attenuator  28.82 
 
 
503 aa  63.9  0.000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0348648  hitchhiker  0.0000779954 
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  26.34 
 
 
443 aa  63.5  0.000000007  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  24.9 
 
 
375 aa  63.9  0.000000007  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_013521  Sked_08570  cell envelope-related function transcriptional attenuator common domain protein  26.69 
 
 
365 aa  63.5  0.000000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.671315  normal  0.595892 
 
 
-
 
NC_009338  Mflv_1666  cell envelope-related transcriptional attenuator  31.28 
 
 
649 aa  63.9  0.000000007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4519  cell envelope-related transcriptional attenuator  28.23 
 
 
505 aa  63.5  0.000000008  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  24.57 
 
 
379 aa  63.5  0.000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  30.49 
 
 
521 aa  63.5  0.000000008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
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