Gene Rxyl_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1540 
Symbol 
ID4116404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1558282 
End bp1559268 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content75% 
IMG OID638036336 
Productcell envelope-related transcriptional attenuator 
Protein accessionYP_644314 
Protein GI108804377 
COG category[K] Transcription 
COG ID[COG1316] Transcriptional regulator 
TIGRFAM ID[TIGR00350] cell envelope-related function transcriptional attenuator common domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.112437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCCCGG CATCCCCTCC CATTACACTG CCGGGGATGA GGGACTTCGG GCGCTACACG 
GCAAGACCCT CCTCTACCGG AGGACGCCGG GGACGACGCC TGCTCTTTCT CGGCTCGCTC 
CTTCTCGCCT GCGCGCTCGG CGTGGCGGTT GCGGCGGGGA GCGGGAGGCC GGGGGAGGAG 
GTCTCCGGGC GCGCCGGGGT GTCCGGCGAC CCGCGGGAGC TCGCCCGCAA GGGGCCGCCC 
GGCTCCGGGC CGGTCGACGT TCTCGTGCTC GGCGTCGACC GCAGGCCGGG AGGGGCGGCC 
GAGGGCGGGG GCGTGCGGGC CGACACCATC ATGCTGGTCC GGTTCTTCCC CGGCAGCGGG 
GACATCAACC TGCTGTCCGT GCCGCGGGAC CTGTTCGTCG AGGTGCGGCC CGGGGAGCGG 
GACAGGATAA ACGCCGCCTA CGCCTACGGC GGGGCCCGGC TCGCCGTCGC GGCGGTCGAG 
CGGTACACGG GCGTGGAGGT GGACCACCAC GCCGTGGTGG ACTTCAGGGG GTTTGTGGAG 
GTCGTGGACG CCCTGGGCGG AGTGACGGTG AGGGTCGATG AGGAGCTGCC GCCCGGCTGG 
CGCATCGGGA GGGGCCTCCA GCACCTCGAC GGCCGCAGGG CGCTGCTGTA CGCCCGCTAC 
CGTTCCACGC CCGGGGGGGA TCTGGACAGG ATCCGGCGCC AGCAGGAGCT TCTGGCCGCG 
TTGCGGAGCC GGGCGCTGCG GTGGGAGTCG TTGGCGCGGC TTCCGGAGGT GGTCTCCGTG 
GCGCGGCGGC ACGTGAGGAC CGACCTCTCG GCCGCCGACG CGCTGGCCCT CGCGCGCACC 
CTCCTGCGCC ACGGGCGCGA CGCCACCATG ACCTCCCGGC GGCTCGCGGG CACCCCGGAG 
ACCCTGCCCG ACGGGCGGCA GGTGCTCCTG CCCGACGAGG AGGAGAACCG CAGGGTGCTT 
CGCTCCTTCC TTGCCCCGCC GGGGTAG
 
Protein sequence
MPPASPPITL PGMRDFGRYT ARPSSTGGRR GRRLLFLGSL LLACALGVAV AAGSGRPGEE 
VSGRAGVSGD PRELARKGPP GSGPVDVLVL GVDRRPGGAA EGGGVRADTI MLVRFFPGSG 
DINLLSVPRD LFVEVRPGER DRINAAYAYG GARLAVAAVE RYTGVEVDHH AVVDFRGFVE 
VVDALGGVTV RVDEELPPGW RIGRGLQHLD GRRALLYARY RSTPGGDLDR IRRQQELLAA 
LRSRALRWES LARLPEVVSV ARRHVRTDLS AADALALART LLRHGRDATM TSRRLAGTPE 
TLPDGRQVLL PDEEENRRVL RSFLAPPG