More than 300 homologs were found in PanDaTox collection
for query gene Noca_1739 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_1739  cell envelope-related transcriptional attenuator  100 
 
 
302 aa  608  1e-173  Nocardioides sp. JS614  Bacteria  normal  0.140263  n/a   
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  33.48 
 
 
362 aa  116  5e-25  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  35.07 
 
 
390 aa  112  6e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  30.96 
 
 
419 aa  112  7.000000000000001e-24  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  30.43 
 
 
319 aa  109  5e-23  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  29.44 
 
 
445 aa  106  5e-22  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  34.65 
 
 
353 aa  105  6e-22  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  30.36 
 
 
377 aa  105  1e-21  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  28.78 
 
 
372 aa  105  1e-21  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  32.28 
 
 
374 aa  104  2e-21  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  31.62 
 
 
349 aa  104  2e-21  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  29.96 
 
 
377 aa  103  3e-21  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3034  cell envelope-related transcriptional attenuator  29.96 
 
 
379 aa  103  3e-21  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.63975 
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  32.89 
 
 
356 aa  102  6e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  28.98 
 
 
411 aa  102  6e-21  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  29.55 
 
 
375 aa  102  7e-21  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  29.55 
 
 
375 aa  102  7e-21  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  30.52 
 
 
374 aa  102  7e-21  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  29.55 
 
 
375 aa  102  8e-21  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  29.55 
 
 
375 aa  102  8e-21  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  29.55 
 
 
375 aa  102  8e-21  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  29.96 
 
 
374 aa  102  9e-21  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  30.28 
 
 
414 aa  102  9e-21  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  27.73 
 
 
335 aa  102  9e-21  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  39.05 
 
 
509 aa  101  2e-20  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  29.72 
 
 
383 aa  100  3e-20  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  34.88 
 
 
418 aa  99.8  5e-20  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  33.17 
 
 
302 aa  99.4  6e-20  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5115  membrane-bound transcriptional regulator LytR  32.84 
 
 
303 aa  99  8e-20  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5506  membrane-bound transcriptional regulator LytR  32.84 
 
 
303 aa  99  8e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00691653  n/a   
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  30.32 
 
 
380 aa  99  9e-20  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_005957  BT9727_0516  LytR family transcriptional regulator  32.14 
 
 
337 aa  97.4  2e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4961  membrane-bound transcriptional regulator LytR  32.34 
 
 
303 aa  97.8  2e-19  Bacillus cereus E33L  Bacteria  normal  0.0205697  n/a   
 
 
-
 
NC_011831  Cagg_1876  cell envelope-related transcriptional attenuator  33.93 
 
 
455 aa  97.8  2e-19  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000275813  normal 
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  32.02 
 
 
338 aa  97.8  2e-19  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  32.14 
 
 
337 aa  97.1  3e-19  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  32.14 
 
 
333 aa  97.1  3e-19  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  32.14 
 
 
338 aa  97.1  3e-19  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  31.62 
 
 
337 aa  97.1  4e-19  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  28.95 
 
 
317 aa  96.7  4e-19  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  32.18 
 
 
299 aa  95.5  9e-19  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5436  membrane-bound transcriptional regulator LytR  32.84 
 
 
302 aa  95.1  1e-18  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0516  LytR family transcriptional regulator  31.75 
 
 
337 aa  95.5  1e-18  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0643  transcription antiterminator, LytR family  31.62 
 
 
338 aa  95.1  1e-18  Bacillus cereus B4264  Bacteria  normal  0.849345  n/a   
 
 
-
 
NC_011772  BCG9842_B4695  transcription antiterminator, LytR family  31.62 
 
 
338 aa  94.7  1e-18  Bacillus cereus G9842  Bacteria  normal  0.541641  hitchhiker  0.0000000308245 
 
 
-
 
NC_009674  Bcer98_3796  membrane-bound transcriptional regulator LytR  32.18 
 
 
302 aa  94.7  2e-18  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.0000323774  n/a   
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  37.2 
 
 
381 aa  94.4  2e-18  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_011773  BCAH820_5355  membrane-bound transcriptional regulator LytR  31.84 
 
 
303 aa  94.4  2e-18  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  30.84 
 
 
304 aa  93.2  5e-18  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5058  membrane-bound transcriptional regulator LytR  32.18 
 
 
304 aa  92.8  7e-18  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4851  cell envelope-related transcriptional attenuator  36.31 
 
 
432 aa  92.4  9e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  35.85 
 
 
310 aa  92  1e-17  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  31.3 
 
 
521 aa  91.7  1e-17  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  30 
 
 
490 aa  91.7  1e-17  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  32.12 
 
 
407 aa  90.9  2e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_013411  GYMC61_3385  membrane-bound transcriptional regulator LytR  35.85 
 
 
313 aa  90.9  2e-17  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  33.88 
 
 
313 aa  90.9  2e-17  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  30.69 
 
 
304 aa  90.9  3e-17  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  32.69 
 
 
504 aa  90.5  3e-17  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  31.35 
 
 
338 aa  90.5  3e-17  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  34.87 
 
 
337 aa  90.1  4e-17  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  38.75 
 
 
497 aa  89.7  5e-17  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_03580  cell envelope-related function transcriptional attenuator common domain protein  31.58 
 
 
448 aa  89.7  5e-17  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.742286  normal  0.880699 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  30.37 
 
 
320 aa  88.6  1e-16  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  29.83 
 
 
453 aa  87.4  3e-16  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  32.26 
 
 
377 aa  87  3e-16  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_013205  Aaci_1875  cell envelope-related transcriptional attenuator  29.55 
 
 
344 aa  86.3  5e-16  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_1352  cell envelope-related transcriptional attenuator  30.92 
 
 
488 aa  86.3  5e-16  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00278352  n/a   
 
 
-
 
NC_009513  Lreu_1057  cell envelope-related transcriptional attenuator  28.51 
 
 
333 aa  85.5  9e-16  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.0371332  n/a   
 
 
-
 
NC_011884  Cyan7425_3856  cell envelope-related transcriptional attenuator  30.31 
 
 
451 aa  85.1  0.000000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  34.24 
 
 
409 aa  84.7  0.000000000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_008531  LEUM_1851  transcriptional regulator  27.67 
 
 
392 aa  85.1  0.000000000000001  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  29.43 
 
 
563 aa  84.3  0.000000000000002  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  33.88 
 
 
307 aa  84.3  0.000000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_013171  Apre_1275  cell envelope-related transcriptional attenuator  27.98 
 
 
477 aa  84.3  0.000000000000002  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000150477  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  35.17 
 
 
505 aa  83.6  0.000000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  27.65 
 
 
308 aa  84.3  0.000000000000003  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_008312  Tery_1857  cell envelope-related transcriptional attenuator  33.98 
 
 
456 aa  83.6  0.000000000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  0.046941  normal 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  34.71 
 
 
573 aa  83.6  0.000000000000004  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1996  cell envelope-related transcriptional attenuator  27.45 
 
 
527 aa  83.6  0.000000000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.177975 
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  28.12 
 
 
443 aa  83.6  0.000000000000004  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_009523  RoseRS_4519  cell envelope-related transcriptional attenuator  29.58 
 
 
505 aa  82.8  0.000000000000006  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  28.57 
 
 
322 aa  82.4  0.000000000000009  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  29.53 
 
 
333 aa  82  0.00000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  30.43 
 
 
307 aa  82  0.00000000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_008025  Dgeo_1232  cell envelope-related transcriptional attenuator  36.3 
 
 
377 aa  81.3  0.00000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.113674  normal 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  35.09 
 
 
625 aa  80.9  0.00000000000002  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  29.28 
 
 
329 aa  81.3  0.00000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  29.37 
 
 
326 aa  80.5  0.00000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_009767  Rcas_0015  cell envelope-related transcriptional attenuator  28.75 
 
 
503 aa  80.5  0.00000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0348648  hitchhiker  0.0000779954 
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  28.14 
 
 
333 aa  80.9  0.00000000000003  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  28.14 
 
 
333 aa  80.9  0.00000000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  28.14 
 
 
335 aa  80.9  0.00000000000003  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  28.14 
 
 
333 aa  80.9  0.00000000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  32.28 
 
 
311 aa  80.9  0.00000000000003  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  28.14 
 
 
333 aa  80.9  0.00000000000003  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  32.28 
 
 
311 aa  80.9  0.00000000000003  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  32.28 
 
 
311 aa  80.9  0.00000000000003  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  29.66 
 
 
486 aa  80.1  0.00000000000004  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_009487  SaurJH9_1423  cell envelope-related transcriptional attenuator  29.28 
 
 
327 aa  80.1  0.00000000000004  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.302612  n/a   
 
 
-
 
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