More than 300 homologs were found in PanDaTox collection
for query gene Syncc9605_1641 on replicon NC_007516
Organism: Synechococcus sp. CC9605



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007516  Syncc9605_1641  cell envelope-related function transcriptional attenuator  100 
 
 
314 aa  632  1e-180  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008820  P9303_09711  membrane bound transcriptional regulator-like protein  59.26 
 
 
298 aa  359  4e-98  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  37.14 
 
 
308 aa  144  3e-33  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_011884  Cyan7425_3856  cell envelope-related transcriptional attenuator  38.42 
 
 
451 aa  134  1.9999999999999998e-30  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1232  cell envelope-related transcriptional attenuator  39.23 
 
 
377 aa  133  5e-30  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.113674  normal 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  34.33 
 
 
453 aa  129  9.000000000000001e-29  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  32.48 
 
 
436 aa  125  9e-28  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2524  cell envelope-related transcriptional attenuator  32.63 
 
 
492 aa  124  3e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  31.76 
 
 
411 aa  123  5e-27  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  31.86 
 
 
419 aa  122  5e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_013161  Cyan8802_3582  cell envelope-related transcriptional attenuator  32.28 
 
 
492 aa  121  9.999999999999999e-27  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1572  cell envelope-related transcriptional attenuator  36.51 
 
 
384 aa  120  3.9999999999999996e-26  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.0072424  normal  0.757675 
 
 
-
 
NC_011729  PCC7424_2873  cell envelope-related transcriptional attenuator  35.71 
 
 
475 aa  119  9e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014248  Aazo_3223  cell envelope-like transcriptional attenuator  33.33 
 
 
471 aa  115  7.999999999999999e-25  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  31.43 
 
 
445 aa  112  6e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_013946  Mrub_2282  cell envelope-related transcriptional attenuator  36.31 
 
 
389 aa  112  7.000000000000001e-24  Meiothermus ruber DSM 1279  Bacteria  normal  0.072814  hitchhiker  0.000000103578 
 
 
-
 
NC_011726  PCC8801_1109  cell envelope-related transcriptional attenuator  33.18 
 
 
481 aa  112  8.000000000000001e-24  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1138  cell envelope-related transcriptional attenuator  33.18 
 
 
481 aa  112  9e-24  Cyanothece sp. PCC 8802  Bacteria  normal  0.441684  normal 
 
 
-
 
NC_011729  PCC7424_2953  cell envelope-related transcriptional attenuator  34.65 
 
 
502 aa  110  2.0000000000000002e-23  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.873931 
 
 
-
 
NC_014212  Mesil_0754  cell envelope-related transcriptional attenuator  31.61 
 
 
419 aa  111  2.0000000000000002e-23  Meiothermus silvanus DSM 9946  Bacteria  normal  0.0493984  hitchhiker  0.0069249 
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  34.48 
 
 
418 aa  110  4.0000000000000004e-23  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  31.88 
 
 
403 aa  108  9.000000000000001e-23  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_013205  Aaci_1875  cell envelope-related transcriptional attenuator  35.03 
 
 
344 aa  107  2e-22  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  31.79 
 
 
414 aa  108  2e-22  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  28.02 
 
 
405 aa  107  3e-22  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_008312  Tery_2604  cell envelope-related transcriptional attenuator  36.11 
 
 
471 aa  105  7e-22  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.22991 
 
 
-
 
NC_007604  Synpcc7942_0961  cell envelope-related function transcriptional attenuator  33.68 
 
 
337 aa  105  9e-22  Synechococcus elongatus PCC 7942  Bacteria  normal  0.472241  normal 
 
 
-
 
NC_014212  Mesil_2090  cell envelope-related transcriptional attenuator  30.38 
 
 
417 aa  105  1e-21  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1857  cell envelope-related transcriptional attenuator  32.65 
 
 
456 aa  104  2e-21  Trichodesmium erythraeum IMS101  Bacteria  normal  0.046941  normal 
 
 
-
 
NC_007413  Ava_0411  cell envelope-like transcriptional attenuator  34.08 
 
 
472 aa  100  3e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.207765 
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  30.41 
 
 
344 aa  99.8  5e-20  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  29.28 
 
 
319 aa  97.8  2e-19  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_009718  Fnod_1774  cell envelope-related transcriptional attenuator  32.89 
 
 
400 aa  94  3e-18  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0243051  n/a   
 
 
-
 
NC_009486  Tpet_0931  cell envelope-related transcriptional attenuator  30.49 
 
 
397 aa  92.8  7e-18  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.00105119  n/a   
 
 
-
 
NC_008148  Rxyl_0152  cell envelope-related transcriptional attenuator  29.24 
 
 
271 aa  92.8  7e-18  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0953  cell envelope-related transcriptional attenuator  30.77 
 
 
370 aa  91.3  2e-17  Thermotoga sp. RQ2  Bacteria  normal  0.0121722  n/a   
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  30.56 
 
 
426 aa  91.3  2e-17  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  28.12 
 
 
380 aa  90.9  2e-17  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_009616  Tmel_1561  cell envelope-related transcriptional attenuator  30.37 
 
 
387 aa  88.6  1e-16  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1717  cell envelope-related transcriptional attenuator  29.95 
 
 
379 aa  88.6  1e-16  Clostridium cellulolyticum H10  Bacteria  normal  0.0474676  n/a   
 
 
-
 
NC_013946  Mrub_2230  cell envelope-related transcriptional attenuator  30.86 
 
 
417 aa  88.2  2e-16  Meiothermus ruber DSM 1279  Bacteria  normal  0.0308391  normal 
 
 
-
 
NC_011830  Dhaf_3430  cell envelope-related transcriptional attenuator  28.41 
 
 
439 aa  87.4  3e-16  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0225853  n/a   
 
 
-
 
NC_013739  Cwoe_5265  cell envelope-related transcriptional attenuator  29.13 
 
 
414 aa  85.1  0.000000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.534178 
 
 
-
 
NC_008025  Dgeo_0132  cell envelope-related transcriptional attenuator  29.55 
 
 
426 aa  85.5  0.000000000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.272824  normal 
 
 
-
 
NC_009632  SaurJH1_1451  transcription attenuator LytR  28.57 
 
 
327 aa  84.3  0.000000000000002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1423  cell envelope-related transcriptional attenuator  28.57 
 
 
327 aa  84.3  0.000000000000002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.302612  n/a   
 
 
-
 
NC_014248  Aazo_1762  cell envelope-like transcriptional attenuator  30.81 
 
 
501 aa  84  0.000000000000003  'Nostoc azollae' 0708  Bacteria  normal  0.103676  n/a   
 
 
-
 
NC_009012  Cthe_0861  cell envelope-related transcriptional attenuator  25 
 
 
378 aa  83.6  0.000000000000004  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  26.14 
 
 
406 aa  82.8  0.000000000000006  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_002976  SERP0932  transcriptional regulator, putative  30.73 
 
 
329 aa  82.8  0.000000000000007  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  34.02 
 
 
521 aa  82.8  0.000000000000007  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_008820  P9303_09781  LytR-membrane bound transcriptional regulator  29.56 
 
 
336 aa  82.4  0.000000000000009  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_009513  Lreu_1352  cell envelope-related transcriptional attenuator  29.41 
 
 
488 aa  81.3  0.00000000000002  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00278352  n/a   
 
 
-
 
NC_007413  Ava_2679  cell envelope-like transcriptional attenuator  30.65 
 
 
503 aa  81.6  0.00000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2233  cell envelope-related transcriptional attenuator  23.64 
 
 
303 aa  80.5  0.00000000000004  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  28.29 
 
 
490 aa  79.7  0.00000000000007  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_009012  Cthe_0727  cell envelope-related transcriptional attenuator  26.84 
 
 
308 aa  79.3  0.00000000000008  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0775994  n/a   
 
 
-
 
NC_009012  Cthe_3102  cell envelope-related transcriptional attenuator  31.1 
 
 
311 aa  79  0.0000000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  30.43 
 
 
311 aa  78.2  0.0000000000002  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  27.44 
 
 
335 aa  78.2  0.0000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  30.43 
 
 
311 aa  78.2  0.0000000000002  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  30.43 
 
 
311 aa  78.2  0.0000000000002  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  29.94 
 
 
434 aa  76.6  0.0000000000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  28.65 
 
 
563 aa  76.3  0.0000000000006  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  30.65 
 
 
349 aa  75.9  0.0000000000008  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  30.56 
 
 
353 aa  75.9  0.0000000000008  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  25.82 
 
 
383 aa  75.9  0.0000000000009  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2334  cell envelope-related transcriptional attenuator  29.83 
 
 
318 aa  75.1  0.000000000001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.591324  n/a   
 
 
-
 
NC_009632  SaurJH1_2377  transcription attenuator LytR  29.83 
 
 
318 aa  75.1  0.000000000001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  29.53 
 
 
313 aa  75.5  0.000000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  30.56 
 
 
356 aa  75.5  0.000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_011898  Ccel_0666  cell envelope-related transcriptional attenuator  27.18 
 
 
377 aa  74.3  0.000000000002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1005  cell envelope-related transcriptional attenuator  24.88 
 
 
285 aa  74.7  0.000000000002  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  29.73 
 
 
443 aa  74.3  0.000000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  25.85 
 
 
497 aa  74.7  0.000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_2102  cell envelope-related function transcriptional attenuator, LytR/CpsA family  29.41 
 
 
327 aa  74.3  0.000000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.246536 
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  24.28 
 
 
377 aa  73.2  0.000000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  28.32 
 
 
375 aa  72.8  0.000000000008  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  28.32 
 
 
375 aa  72.8  0.000000000008  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  28.32 
 
 
375 aa  72.8  0.000000000008  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  28.32 
 
 
375 aa  72.8  0.000000000008  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  28.32 
 
 
375 aa  72.8  0.000000000008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  25.98 
 
 
374 aa  72.8  0.000000000008  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  24.47 
 
 
333 aa  72.4  0.000000000009  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  27.75 
 
 
377 aa  72  0.00000000001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  32.58 
 
 
363 aa  72  0.00000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  28.12 
 
 
512 aa  72  0.00000000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  27.75 
 
 
377 aa  72.4  0.00000000001  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  26.07 
 
 
372 aa  72  0.00000000001  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  25.53 
 
 
329 aa  72  0.00000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  30.38 
 
 
390 aa  72  0.00000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1893  transcriptional regulator, putative  30.05 
 
 
316 aa  71.6  0.00000000002  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0211  cell envelope-related transcriptional attenuator  24.45 
 
 
262 aa  71.2  0.00000000002  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0905  cell envelope-related transcriptional attenuator  26.7 
 
 
388 aa  71.6  0.00000000002  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  27.75 
 
 
374 aa  71.2  0.00000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0287  cell envelope-related transcriptional attenuator  26.18 
 
 
412 aa  71.6  0.00000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0280  putative transcriptional regulator  25.47 
 
 
340 aa  70.5  0.00000000004  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  26.19 
 
 
504 aa  70.5  0.00000000004  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_011831  Cagg_3186  cell envelope-related transcriptional attenuator  29.59 
 
 
451 aa  70.5  0.00000000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.689692 
 
 
-
 
NC_011886  Achl_3034  cell envelope-related transcriptional attenuator  23.92 
 
 
379 aa  70.1  0.00000000005  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.63975 
 
 
-
 
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