More than 300 homologs were found in PanDaTox collection
for query gene Mrub_2230 on replicon NC_013946
Organism: Meiothermus ruber DSM 1279



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013946  Mrub_2230  cell envelope-related transcriptional attenuator  100 
 
 
417 aa  834    Meiothermus ruber DSM 1279  Bacteria  normal  0.0308391  normal 
 
 
-
 
NC_014212  Mesil_0754  cell envelope-related transcriptional attenuator  52.25 
 
 
419 aa  349  5e-95  Meiothermus silvanus DSM 9946  Bacteria  normal  0.0493984  hitchhiker  0.0069249 
 
 
-
 
NC_008025  Dgeo_0132  cell envelope-related transcriptional attenuator  29.1 
 
 
426 aa  117  5e-25  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.272824  normal 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  34.65 
 
 
453 aa  116  6e-25  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  28.52 
 
 
405 aa  106  6e-22  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  29.18 
 
 
403 aa  106  7e-22  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_008025  Dgeo_1232  cell envelope-related transcriptional attenuator  34.56 
 
 
377 aa  104  3e-21  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.113674  normal 
 
 
-
 
NC_013161  Cyan8802_1138  cell envelope-related transcriptional attenuator  34.17 
 
 
481 aa  103  5e-21  Cyanothece sp. PCC 8802  Bacteria  normal  0.441684  normal 
 
 
-
 
NC_011726  PCC8801_1109  cell envelope-related transcriptional attenuator  34.17 
 
 
481 aa  103  5e-21  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_014212  Mesil_1572  cell envelope-related transcriptional attenuator  35.35 
 
 
384 aa  102  2e-20  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.0072424  normal  0.757675 
 
 
-
 
NC_011729  PCC7424_2873  cell envelope-related transcriptional attenuator  32.32 
 
 
475 aa  101  2e-20  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014212  Mesil_2090  cell envelope-related transcriptional attenuator  26.89 
 
 
417 aa  99.8  7e-20  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008820  P9303_09711  membrane bound transcriptional regulator-like protein  29.72 
 
 
298 aa  99.4  1e-19  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_007516  Syncc9605_1641  cell envelope-related function transcriptional attenuator  29.44 
 
 
314 aa  98.2  2e-19  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0727  cell envelope-related transcriptional attenuator  29.69 
 
 
308 aa  97.8  3e-19  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0775994  n/a   
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  33.15 
 
 
436 aa  97.4  4e-19  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2604  cell envelope-related transcriptional attenuator  27.87 
 
 
471 aa  97.1  6e-19  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.22991 
 
 
-
 
NC_008148  Rxyl_0152  cell envelope-related transcriptional attenuator  33.02 
 
 
271 aa  95.1  2e-18  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2953  cell envelope-related transcriptional attenuator  32.34 
 
 
502 aa  94.7  3e-18  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.873931 
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  28.64 
 
 
308 aa  94.4  4e-18  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  29.85 
 
 
414 aa  92.4  1e-17  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1561  cell envelope-related transcriptional attenuator  29.5 
 
 
387 aa  92  2e-17  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_3223  cell envelope-like transcriptional attenuator  30.67 
 
 
471 aa  90.9  4e-17  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3856  cell envelope-related transcriptional attenuator  34.24 
 
 
451 aa  90.5  5e-17  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0411  cell envelope-like transcriptional attenuator  30 
 
 
472 aa  89  1e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.207765 
 
 
-
 
NC_013161  Cyan8802_3582  cell envelope-related transcriptional attenuator  31.69 
 
 
492 aa  87.8  3e-16  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_1005  cell envelope-related transcriptional attenuator  26.5 
 
 
285 aa  87.8  3e-16  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0953  cell envelope-related transcriptional attenuator  28.28 
 
 
370 aa  87.4  4e-16  Thermotoga sp. RQ2  Bacteria  normal  0.0121722  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  29.06 
 
 
418 aa  87.8  4e-16  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  30.49 
 
 
377 aa  87  6e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009486  Tpet_0931  cell envelope-related transcriptional attenuator  28.23 
 
 
397 aa  86.7  7e-16  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.00105119  n/a   
 
 
-
 
NC_011726  PCC8801_2524  cell envelope-related transcriptional attenuator  31.15 
 
 
492 aa  86.3  9e-16  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_1875  cell envelope-related transcriptional attenuator  30.81 
 
 
344 aa  84.7  0.000000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1715  transcriptional regulator  25.08 
 
 
374 aa  84  0.000000000000004  Lactobacillus gasseri ATCC 33323  Bacteria  normal  hitchhiker  0.00565214 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  28.36 
 
 
445 aa  84  0.000000000000005  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  30.08 
 
 
411 aa  82.8  0.000000000000009  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1774  cell envelope-related transcriptional attenuator  26.63 
 
 
400 aa  82.4  0.00000000000001  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0243051  n/a   
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  33.33 
 
 
311 aa  82  0.00000000000002  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2378  cell envelope-related function transcriptional attenuator  29.25 
 
 
437 aa  82  0.00000000000002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0983623  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  33.33 
 
 
311 aa  82  0.00000000000002  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  33.33 
 
 
311 aa  82  0.00000000000002  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_010003  Pmob_0905  cell envelope-related transcriptional attenuator  26.89 
 
 
388 aa  81.3  0.00000000000003  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2090  transcription regulator LytR-like protein  33.33 
 
 
437 aa  80.9  0.00000000000004  Clostridium perfringens SM101  Bacteria  normal  0.853394  n/a   
 
 
-
 
NC_011830  Dhaf_3430  cell envelope-related transcriptional attenuator  27.32 
 
 
439 aa  80.5  0.00000000000005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0225853  n/a   
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  26.96 
 
 
383 aa  79.7  0.0000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0961  cell envelope-related function transcriptional attenuator  29.78 
 
 
337 aa  79.3  0.0000000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  0.472241  normal 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  32.6 
 
 
400 aa  77  0.0000000000005  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  26.72 
 
 
374 aa  77.4  0.0000000000005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_1762  cell envelope-like transcriptional attenuator  26.92 
 
 
501 aa  76.6  0.0000000000007  'Nostoc azollae' 0708  Bacteria  normal  0.103676  n/a   
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  36.54 
 
 
409 aa  76.6  0.0000000000007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_009674  Bcer98_3796  membrane-bound transcriptional regulator LytR  26.77 
 
 
302 aa  76.3  0.0000000000008  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.0000323774  n/a   
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  27.73 
 
 
304 aa  76.3  0.0000000000009  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  27.04 
 
 
335 aa  75.9  0.000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_2282  cell envelope-related transcriptional attenuator  29.67 
 
 
389 aa  75.5  0.000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.072814  hitchhiker  0.000000103578 
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  27.59 
 
 
377 aa  74.7  0.000000000003  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1857  cell envelope-related transcriptional attenuator  30.69 
 
 
456 aa  74.7  0.000000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  0.046941  normal 
 
 
-
 
NC_010184  BcerKBAB4_5058  membrane-bound transcriptional regulator LytR  27.73 
 
 
304 aa  74.3  0.000000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  37.18 
 
 
306 aa  74.7  0.000000000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_005945  BAS5115  membrane-bound transcriptional regulator LytR  26.82 
 
 
303 aa  73.6  0.000000000006  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  25.79 
 
 
375 aa  73.6  0.000000000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  25.79 
 
 
375 aa  73.6  0.000000000006  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5506  membrane-bound transcriptional regulator LytR  26.82 
 
 
303 aa  73.6  0.000000000006  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00691653  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  28.14 
 
 
506 aa  73.6  0.000000000006  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  25.79 
 
 
375 aa  73.6  0.000000000006  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  26.09 
 
 
375 aa  73.6  0.000000000007  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  26.72 
 
 
377 aa  73.6  0.000000000007  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  26.09 
 
 
375 aa  73.6  0.000000000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_1352  cell envelope-related transcriptional attenuator  24.62 
 
 
488 aa  73.2  0.000000000008  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00278352  n/a   
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  25.94 
 
 
406 aa  73.2  0.000000000009  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_006274  BCZK4961  membrane-bound transcriptional regulator LytR  26.36 
 
 
303 aa  72.4  0.00000000001  Bacillus cereus E33L  Bacteria  normal  0.0205697  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  26.2 
 
 
319 aa  72.4  0.00000000001  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  29.52 
 
 
353 aa  72.8  0.00000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  30.4 
 
 
356 aa  72.4  0.00000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  26.72 
 
 
374 aa  72.8  0.00000000001  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  34.57 
 
 
480 aa  72  0.00000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  26.29 
 
 
372 aa  72  0.00000000002  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  33.54 
 
 
497 aa  71.6  0.00000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  25.91 
 
 
302 aa  71.2  0.00000000003  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0666  cell envelope-related transcriptional attenuator  25 
 
 
377 aa  70.9  0.00000000004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  31.07 
 
 
509 aa  70.9  0.00000000004  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3214  cell envelope-related transcriptional attenuator  30.14 
 
 
443 aa  70.5  0.00000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00000235319 
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  26.36 
 
 
299 aa  70.5  0.00000000006  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  28.02 
 
 
549 aa  69.7  0.00000000008  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1540  cell envelope-related transcriptional attenuator  32.51 
 
 
328 aa  69.7  0.00000000008  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.112437  n/a   
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  25.86 
 
 
310 aa  69.7  0.00000000009  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_011773  BCAH820_5355  membrane-bound transcriptional regulator LytR  25.91 
 
 
303 aa  69.3  0.0000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A5436  membrane-bound transcriptional regulator LytR  25.91 
 
 
302 aa  68.6  0.0000000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  31.87 
 
 
336 aa  68.6  0.0000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  27.31 
 
 
520 aa  68.9  0.0000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_009012  Cthe_3102  cell envelope-related transcriptional attenuator  25.43 
 
 
311 aa  68.2  0.0000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1717  cell envelope-related transcriptional attenuator  26.63 
 
 
379 aa  67.8  0.0000000003  Clostridium cellulolyticum H10  Bacteria  normal  0.0474676  n/a   
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  29.86 
 
 
395 aa  68.2  0.0000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  33.87 
 
 
407 aa  68.2  0.0000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_009487  SaurJH9_1423  cell envelope-related transcriptional attenuator  25.69 
 
 
327 aa  68.2  0.0000000003  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.302612  n/a   
 
 
-
 
NC_009632  SaurJH1_1451  transcription attenuator LytR  25.69 
 
 
327 aa  68.2  0.0000000003  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  25.91 
 
 
304 aa  67.4  0.0000000004  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  29.67 
 
 
481 aa  67.8  0.0000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_013521  Sked_08570  cell envelope-related function transcriptional attenuator common domain protein  27.63 
 
 
365 aa  67.4  0.0000000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.671315  normal  0.595892 
 
 
-
 
NC_013411  GYMC61_3385  membrane-bound transcriptional regulator LytR  27.23 
 
 
313 aa  67.4  0.0000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  28.98 
 
 
505 aa  67  0.0000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
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