More than 300 homologs were found in PanDaTox collection
for query gene Dgeo_0132 on replicon NC_008025
Organism: Deinococcus geothermalis DSM 11300



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008025  Dgeo_0132  cell envelope-related transcriptional attenuator  100 
 
 
426 aa  851    Deinococcus geothermalis DSM 11300  Bacteria  normal  0.272824  normal 
 
 
-
 
NC_014212  Mesil_0754  cell envelope-related transcriptional attenuator  31.98 
 
 
419 aa  119  7.999999999999999e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  0.0493984  hitchhiker  0.0069249 
 
 
-
 
NC_011726  PCC8801_1109  cell envelope-related transcriptional attenuator  28.28 
 
 
481 aa  105  2e-21  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1138  cell envelope-related transcriptional attenuator  28.28 
 
 
481 aa  105  2e-21  Cyanothece sp. PCC 8802  Bacteria  normal  0.441684  normal 
 
 
-
 
NC_013205  Aaci_1875  cell envelope-related transcriptional attenuator  34.45 
 
 
344 aa  103  4e-21  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  31.37 
 
 
453 aa  101  2e-20  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  32.85 
 
 
414 aa  96.7  7e-19  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  26.25 
 
 
405 aa  95.9  1e-18  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  24.7 
 
 
403 aa  93.6  6e-18  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_008025  Dgeo_1232  cell envelope-related transcriptional attenuator  35.18 
 
 
377 aa  92.4  1e-17  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.113674  normal 
 
 
-
 
NC_013171  Apre_1005  cell envelope-related transcriptional attenuator  26.81 
 
 
285 aa  92.8  1e-17  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2230  cell envelope-related transcriptional attenuator  29.13 
 
 
417 aa  91.7  2e-17  Meiothermus ruber DSM 1279  Bacteria  normal  0.0308391  normal 
 
 
-
 
NC_014248  Aazo_3223  cell envelope-like transcriptional attenuator  26.78 
 
 
471 aa  90.9  4e-17  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  34.95 
 
 
549 aa  90.5  5e-17  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_2604  cell envelope-related transcriptional attenuator  28.32 
 
 
471 aa  89.7  1e-16  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.22991 
 
 
-
 
NC_009012  Cthe_0727  cell envelope-related transcriptional attenuator  33.7 
 
 
308 aa  89.4  1e-16  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0775994  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  36.79 
 
 
509 aa  89  2e-16  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_2524  cell envelope-related transcriptional attenuator  27.54 
 
 
492 aa  87.8  4e-16  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3582  cell envelope-related transcriptional attenuator  27.54 
 
 
492 aa  87  5e-16  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  30.65 
 
 
406 aa  87  6e-16  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_008820  P9303_09711  membrane bound transcriptional regulator-like protein  28.36 
 
 
298 aa  86.3  9e-16  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_007516  Syncc9605_1641  cell envelope-related function transcriptional attenuator  28.57 
 
 
314 aa  86.3  0.000000000000001  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_2873  cell envelope-related transcriptional attenuator  33.15 
 
 
475 aa  85.9  0.000000000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_0411  cell envelope-like transcriptional attenuator  26.49 
 
 
472 aa  85.5  0.000000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.207765 
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  30.48 
 
 
319 aa  85.5  0.000000000000002  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  30.66 
 
 
497 aa  85.5  0.000000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  29.96 
 
 
407 aa  84.3  0.000000000000004  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_014212  Mesil_1572  cell envelope-related transcriptional attenuator  28.34 
 
 
384 aa  83.6  0.000000000000006  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.0072424  normal  0.757675 
 
 
-
 
NC_011729  PCC7424_2953  cell envelope-related transcriptional attenuator  25.69 
 
 
502 aa  81.6  0.00000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.873931 
 
 
-
 
NC_013946  Mrub_2282  cell envelope-related transcriptional attenuator  28.12 
 
 
389 aa  82  0.00000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.072814  hitchhiker  0.000000103578 
 
 
-
 
NC_014212  Mesil_2090  cell envelope-related transcriptional attenuator  27.18 
 
 
417 aa  82  0.00000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0152  cell envelope-related transcriptional attenuator  34.25 
 
 
271 aa  82  0.00000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0189  cell envelope-related transcriptional attenuator  30.81 
 
 
403 aa  81.3  0.00000000000003  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  29.57 
 
 
308 aa  80.1  0.00000000000006  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  30.33 
 
 
512 aa  80.5  0.00000000000006  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  30.73 
 
 
453 aa  79.3  0.0000000000001  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_010001  Cphy_3892  cell envelope-related transcriptional attenuator  28.65 
 
 
453 aa  79.3  0.0000000000001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_1762  cell envelope-like transcriptional attenuator  32.95 
 
 
501 aa  78.6  0.0000000000002  'Nostoc azollae' 0708  Bacteria  normal  0.103676  n/a   
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  29.19 
 
 
481 aa  77.8  0.0000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  28.57 
 
 
563 aa  77.8  0.0000000000004  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  34.29 
 
 
363 aa  77.4  0.0000000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  28.57 
 
 
418 aa  76.6  0.0000000000007  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  26.41 
 
 
335 aa  76.6  0.0000000000009  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  27.83 
 
 
436 aa  76.3  0.0000000000009  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_1352  cell envelope-related transcriptional attenuator  28.18 
 
 
488 aa  76.6  0.0000000000009  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00278352  n/a   
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  26.4 
 
 
383 aa  75.9  0.000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  32.39 
 
 
466 aa  75.9  0.000000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1561  cell envelope-related transcriptional attenuator  30.61 
 
 
387 aa  75.9  0.000000000001  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  29.61 
 
 
504 aa  75.9  0.000000000001  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  32.02 
 
 
329 aa  75.1  0.000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  31.45 
 
 
584 aa  75.5  0.000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3856  cell envelope-related transcriptional attenuator  27.04 
 
 
451 aa  75.1  0.000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP1893  transcriptional regulator, putative  27.27 
 
 
316 aa  74.7  0.000000000003  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  28.57 
 
 
377 aa  75.1  0.000000000003  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  28 
 
 
374 aa  74.7  0.000000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  30.87 
 
 
499 aa  74.3  0.000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013235  Namu_4529  cell envelope-related transcriptional attenuator  29.32 
 
 
365 aa  74.7  0.000000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  0.25457  normal 
 
 
-
 
NC_007604  Synpcc7942_0961  cell envelope-related function transcriptional attenuator  31.71 
 
 
337 aa  73.9  0.000000000004  Synechococcus elongatus PCC 7942  Bacteria  normal  0.472241  normal 
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  28 
 
 
374 aa  73.9  0.000000000005  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  29.63 
 
 
506 aa  73.9  0.000000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  28 
 
 
372 aa  73.9  0.000000000005  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_008148  Rxyl_1540  cell envelope-related transcriptional attenuator  32.54 
 
 
328 aa  73.9  0.000000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.112437  n/a   
 
 
-
 
NC_013517  Sterm_0211  cell envelope-related transcriptional attenuator  23.38 
 
 
262 aa  73.6  0.000000000007  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  27.36 
 
 
445 aa  73.2  0.000000000007  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  26.79 
 
 
317 aa  73.2  0.000000000008  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  30 
 
 
468 aa  73.2  0.000000000008  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  26.92 
 
 
419 aa  73.2  0.000000000008  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_009718  Fnod_1208  cell envelope-related transcriptional attenuator  25.91 
 
 
330 aa  73.2  0.000000000009  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000721845  n/a   
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  31.51 
 
 
487 aa  73.2  0.000000000009  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_008312  Tery_1857  cell envelope-related transcriptional attenuator  25.41 
 
 
456 aa  73.2  0.000000000009  Trichodesmium erythraeum IMS101  Bacteria  normal  0.046941  normal 
 
 
-
 
NC_009632  SaurJH1_2377  transcription attenuator LytR  25.2 
 
 
318 aa  72.8  0.00000000001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  27.43 
 
 
375 aa  72.4  0.00000000001  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2334  cell envelope-related transcriptional attenuator  25.2 
 
 
318 aa  72.8  0.00000000001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.591324  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  27.43 
 
 
375 aa  72.4  0.00000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_2102  cell envelope-related function transcriptional attenuator, LytR/CpsA family  30.27 
 
 
327 aa  72.4  0.00000000001  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.246536 
 
 
-
 
NC_013521  Sked_08570  cell envelope-related function transcriptional attenuator common domain protein  29.6 
 
 
365 aa  72.4  0.00000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.671315  normal  0.595892 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  34.36 
 
 
307 aa  72  0.00000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  27.43 
 
 
375 aa  72.4  0.00000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  27.43 
 
 
375 aa  72.4  0.00000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  27.43 
 
 
375 aa  72  0.00000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  27.43 
 
 
377 aa  71.6  0.00000000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  27.7 
 
 
380 aa  72.4  0.00000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  29.18 
 
 
505 aa  72  0.00000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  28.42 
 
 
400 aa  72  0.00000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  36.13 
 
 
311 aa  71.6  0.00000000002  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  36.13 
 
 
311 aa  71.6  0.00000000003  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  27.56 
 
 
520 aa  71.6  0.00000000003  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  36.13 
 
 
311 aa  71.6  0.00000000003  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  35.8 
 
 
409 aa  71.2  0.00000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_008532  STER_0378  transcriptional regulator  26.46 
 
 
408 aa  70.9  0.00000000004  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0016641  n/a   
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  29.2 
 
 
410 aa  70.9  0.00000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0931  cell envelope-related transcriptional attenuator  27.45 
 
 
397 aa  70.5  0.00000000005  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.00105119  n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  25.71 
 
 
480 aa  70.5  0.00000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  32.68 
 
 
491 aa  70.9  0.00000000005  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_013235  Namu_4976  cell envelope-related transcriptional attenuator  30.34 
 
 
551 aa  70.5  0.00000000006  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  26.47 
 
 
382 aa  70.5  0.00000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  29.13 
 
 
411 aa  70.1  0.00000000007  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  32.3 
 
 
390 aa  70.1  0.00000000008  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  32.46 
 
 
394 aa  69.3  0.0000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  32.12 
 
 
478 aa  68.9  0.0000000001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
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