Gene Fnod_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1208 
Symbol 
ID5452888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand- 
Start bp1299403 
End bp1300395 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content33% 
IMG OID640874984 
Productcell envelope-related transcriptional attenuator 
Protein accessionYP_001410712 
Protein GI154249887 
COG category[K] Transcription 
COG ID[COG1316] Transcriptional regulator 
TIGRFAM ID[TIGR00350] cell envelope-related function transcriptional attenuator common domain 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000000721845 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGAAAG TTTTTACAGG TATCTTGATA AGTGTTGGTG TTGCGACCTT GGTTGGTATT 
ATCTATCTTA ATTATCTGTT CTCTAAGATA AAATTCACAA ATACCTTTTC ACCAGAAGAT 
GTTGGTGTAC AAAATACTCA AAATAGTAAA ATATACGGGG TAACCTCTGA AATAGATAAA 
CGAAAAATTA GTAACTCACA GCAGTTAATG GTCGCAGTCT TTGGCGTAGA TAAAAGAATT 
GGTTACGAAA TACCAAGAAG TGATACTATA ATGATTGTTG CCTTAGATCA AAAAAATAAA 
ACGATAAAAA TTGTATCTGT TATGAGAGAC ATTCTCGTTG AAATACCGAA TTACGGTAAG 
GAAAAATTGA ATAGCGCATA CGCACTTGGA GGACCCAAAT TGGCTATTAC AGTCCTAAAC 
AAAATACTTG GACTGAGTAT AACGAAATAT GTTTCTATTG ATTTTAAAAC ATTCGAAAAA 
ATTGTCGATT CAATTGGTGG GGTAGATGTA GAAATAAAAG ATTACGAGGT TGAACAATTT 
AATATTAGCA CAAGGGAACT TAATAGAGTA AACGGAGGAG TACCAGCTGA AACAATACAG 
GAACCCGGAG TTTATCGTTT AAATGGAAGG CAAGCGCTTG CCTACGCAAG AATTCGTTAT 
GCTGGAAATG GTGATTTCGA AAGAACGTCA CGTCAAAGGT ATTTGTTGTC AAAGATATTT 
GAAAAAGTCA AGACTTTGCC GATTGATAAA AAGATGTATT TAATCGAAAT AATTTTTGAA 
AATATTGAAA CAAACATAAG ACCTTCGGAA TTACTTTCTC TTGCACTAAT AAACATTACA 
AATTATAAGC TTGAAACATT CAGAATACCA GTCAGTGGTT TTTTTGAAGA AACAACTGAA 
TTCATCGAAC GTGAAAACAC CAATTTATGG GTGTTGAAAA TTGACATCGA AAAAAACAAG 
CAAGAACTGG TAAAGTTTCT TAAAACAAGA TGA
 
Protein sequence
MRKVFTGILI SVGVATLVGI IYLNYLFSKI KFTNTFSPED VGVQNTQNSK IYGVTSEIDK 
RKISNSQQLM VAVFGVDKRI GYEIPRSDTI MIVALDQKNK TIKIVSVMRD ILVEIPNYGK 
EKLNSAYALG GPKLAITVLN KILGLSITKY VSIDFKTFEK IVDSIGGVDV EIKDYEVEQF 
NISTRELNRV NGGVPAETIQ EPGVYRLNGR QALAYARIRY AGNGDFERTS RQRYLLSKIF 
EKVKTLPIDK KMYLIEIIFE NIETNIRPSE LLSLALINIT NYKLETFRIP VSGFFEETTE 
FIERENTNLW VLKIDIEKNK QELVKFLKTR