| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1561 |
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| Symbol | |
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| ID | 5296693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1548275 |
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| End bp | 1549438 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 640769838 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_001306791 |
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| Protein GI | 150021437 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAAG CTATTTTTTT ATTAATAGGT GTTATAGTAG TTTTATTTTC ATTGAGTGTA
GTTTTTATCC CCTGGATGCG CTTAATTTTA TATGTAATAT ACTCTCCTCT TAATGAGGAG
ACTAATTTTT TGGTGTTAGG TTTGGATAAG GATATTCAAG GGACGAGAAG AACAGATGTA
ATTATGTTTG TAAGTGTAAA TTCCAAAAGT AAAGAGATAA GAATAACAAG TGTTCCAAGA
GATTTGATTA TCAATGGTAA AAAAATTAAT TCATATTATC AAAGAAATGG TTTAGAAAAT
CTTATAGGGC TAATTGAAGG ATTTTTTGGG AAAAAAGTGG ATAGATACGT AATAGTTGAT
TACGATGTGA TAAAAATCAT AGGTGATGAG ATTGGTCCTA TTGAGGTATA TGTAAATCAG
CCAATGAAAT ATACAGATTA TTCACAAAAT CTGGTAATTA ATTTTGAGCC AGGTTTACAT
AAATTGTATG GAGAAGAGTT ACTTGCTTTT ATGCGTTTCA GAAAGGATTA TAACGGTGAT
TTGGGAAGAA TAGAGAGACA AAAATATATT ATTGAGCAAC TTTTAAAAAC TGCGTTGAAA
AAAGATATTT TTACATTATC AAGGACTTTT AAAAAGGTGT TTGATTTAAC GGAAACTAAT
GTGAAAACTT CTGAATTGGT ATTTTTAGCT GTAAATTTTA GGGATAGATT TAATTTAAAG
GGTATATCTT TTCCTGTTGA ATACGATGTA GATGGTAACA TATATCCTGG AGATATGAAA
CAGTTAAAGG AAAAATATTC CCAAAATGTT CAAGATAAGG AAAATGAATA TGTTTTTTAT
ATAGTCAACA ATACAGAATA TCAAACAAGG ATATATAATG TAAATTTATA TTACATGTGG
AAAGCTGCAG GAGTTATTCC AGAAGCTATA TTTTTCTTGG ATAAGAAAAT TTGGAATTAT
CCTAATGATT TAGTGTATAT TTTAAATGAA AAAGTTAGTA TTGAAAGTGT AAAGAAGATT
GTAAAAACAG TGCATCCAAA GAGGAATTTT GTTATTAAAT ATGCTAAAGA TGATTTAGAA
GGGTATTATA AATTAATTGA TTTACTTACA AGCAGTAGAA ATTACATAGA TTTTCCCGTT
GATTTTATTG TAATTCTTCA TTGA
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| Protein sequence | MKKAIFLLIG VIVVLFSLSV VFIPWMRLIL YVIYSPLNEE TNFLVLGLDK DIQGTRRTDV
IMFVSVNSKS KEIRITSVPR DLIINGKKIN SYYQRNGLEN LIGLIEGFFG KKVDRYVIVD
YDVIKIIGDE IGPIEVYVNQ PMKYTDYSQN LVINFEPGLH KLYGEELLAF MRFRKDYNGD
LGRIERQKYI IEQLLKTALK KDIFTLSRTF KKVFDLTETN VKTSELVFLA VNFRDRFNLK
GISFPVEYDV DGNIYPGDMK QLKEKYSQNV QDKENEYVFY IVNNTEYQTR IYNVNLYYMW
KAAGVIPEAI FFLDKKIWNY PNDLVYILNE KVSIESVKKI VKTVHPKRNF VIKYAKDDLE
GYYKLIDLLT SSRNYIDFPV DFIVILH
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