Gene Tpau_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0136 
Symbol 
ID9154270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp141087 
End bp142487 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content71% 
IMG OID 
Productcell envelope-related transcriptional attenuator 
Protein accessionYP_003645129 
Protein GI296137886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGACG AACGACGCCG GGGCGACGAG CGACCGCTCG CCTGGTCCCA GGTGCCCGAG 
GGGGAACCGT CGGTGACCCG ACGCCCCGTC GGCAACCGGC AGGGCCCGCC GCGCCCGCAG
CAGCCCGGTC GGCAACCGGG CCAGCGTGGG TCGGGGCCAC GCCCCGGTGC CGGCCAGCAG
CCCTTCCGAC CGCAGAATCC GCCGAACCCG GGCAACCAGC AGCCTCGCCC CACCCGGGTC
GAGCGCCCCG CCCCGCAGGG CACGTGGGCA CCGCCGCAGA CCCCCGAACC GATTCCCGCG
AGCACGAGCC GCCGCGCCGG CAGAGTGGGC GAGCGCGGCA GCAGTGGCCG GGTTCCGCCA
CCCCCGCGCC CTCCTCGCGA TCGCTCACGC CGCAGGGCGG CACCGGAGGC GCCGAAGCCC
GCCGCACCGC CGAAGGTCAA ACGCAAGCGC CGCATACGTC CGCTGCGCTG GCTCACCGCG
TTCCTCGTAC TGGTGATCGT GGGCACCGCT GCCGCGACCT TCTACTTCGA CGGCAAGCTC
ACACGGATCG ACGCGCTCGC CGCCTATGCG GGCCGCATCG CCGACACCCC CGGCACCAAC
TGGCTGCTGG TCGGCTCGGA TGCTCGTGAG GGACTCACGC CCGAACAGCA GAAGGACCTG
GCCACCGGCG GCGACCTCGG GGGCGCCCGC ACCGACACCA TCATGCTGGT GCACATCCCC
AAGTCCGGTT CCCCGCTGCT GATCTCGATC CCCCGCGATC TGTACGTACC GGTCCCGGGC
CAAGGCAGCT ACAAGATCAA CGCCGCCTAC TTCCTCGGCG GCCCGAAGCT GTTGGTGCAG
ACCTTCGAAT CGAAGGCGAA GGTGCGCGTC GACCACTACG CGGAGATCGG TTTCGGCGGC
TTCGCGACCA TGGTCGATGC GCTGGGCGGC ATCGAGATGT GCCCGAAGTA CCCGATCAAC
GACCCCAAGG CCGGGATCCG GCTGCAGGCC GGCTGCCAGA ACCTCAGCGG TGCGCAGGCG
CTCGGCTACG TGCGCACCCG TGCCACCCCC AACGCCGACC TCGACCGTGT GGTGCATCAA
CGCGAGTTCA TGACCGCCTT GTTCACCAAG GCGACCTCGC CGACGACGCT GCTCAACCCG
TTCGAGATGT GGAGCCTGGC GGATGCGACG GTGGGCGCGC TCACCGTCGA CACCGACACC
CACCTGTGGG ATCTGGGGCG GCTGGCATGG GCACTGAGCA GCTCTCCGGT AACGACCACC
ACCCCCACCG GCGGCAGCAG CGACACCGAC GAGGGCAATG CCCTCATCTG GGGGAAGAAC
ACCACGGAGT TCTTCAGCCT GATCGCCGCC GACCAGCCGG TTCCCGACCG ACTCCTCAGC
GGGCCTGGGA ATTCCGGATA A
 
Protein sequence
MNDERRRGDE RPLAWSQVPE GEPSVTRRPV GNRQGPPRPQ QPGRQPGQRG SGPRPGAGQQ 
PFRPQNPPNP GNQQPRPTRV ERPAPQGTWA PPQTPEPIPA STSRRAGRVG ERGSSGRVPP
PPRPPRDRSR RRAAPEAPKP AAPPKVKRKR RIRPLRWLTA FLVLVIVGTA AATFYFDGKL
TRIDALAAYA GRIADTPGTN WLLVGSDARE GLTPEQQKDL ATGGDLGGAR TDTIMLVHIP
KSGSPLLISI PRDLYVPVPG QGSYKINAAY FLGGPKLLVQ TFESKAKVRV DHYAEIGFGG
FATMVDALGG IEMCPKYPIN DPKAGIRLQA GCQNLSGAQA LGYVRTRATP NADLDRVVHQ
REFMTALFTK ATSPTTLLNP FEMWSLADAT VGALTVDTDT HLWDLGRLAW ALSSSPVTTT
TPTGGSSDTD EGNALIWGKN TTEFFSLIAA DQPVPDRLLS GPGNSG