More than 300 homologs were found in PanDaTox collection
for query gene Tpau_0136 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  100 
 
 
466 aa  931    Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  53.8 
 
 
307 aa  337  2.9999999999999997e-91  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  53.29 
 
 
409 aa  328  1.0000000000000001e-88  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  54.15 
 
 
306 aa  323  5e-87  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  56.42 
 
 
311 aa  317  4e-85  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  56.42 
 
 
311 aa  317  4e-85  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  56.08 
 
 
311 aa  315  9.999999999999999e-85  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  51.21 
 
 
320 aa  282  7.000000000000001e-75  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  47.93 
 
 
404 aa  275  1.0000000000000001e-72  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  51.55 
 
 
336 aa  273  4.0000000000000004e-72  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  53.42 
 
 
424 aa  267  4e-70  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  50.69 
 
 
326 aa  261  3e-68  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  44.48 
 
 
463 aa  256  4e-67  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  49.48 
 
 
307 aa  256  5e-67  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  51.23 
 
 
394 aa  238  2e-61  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  54.02 
 
 
407 aa  236  8e-61  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  38.29 
 
 
497 aa  207  3e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  50.7 
 
 
404 aa  202  9.999999999999999e-51  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  40.48 
 
 
504 aa  201  3e-50  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  38.39 
 
 
509 aa  198  2.0000000000000003e-49  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  43.5 
 
 
393 aa  197  3e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  37.31 
 
 
434 aa  197  5.000000000000001e-49  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  38.04 
 
 
505 aa  192  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  41.49 
 
 
434 aa  190  4e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  41.04 
 
 
296 aa  189  7e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  43.44 
 
 
313 aa  188  1e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  42.62 
 
 
363 aa  182  9.000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  36.19 
 
 
486 aa  179  7e-44  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  36.03 
 
 
512 aa  175  9.999999999999999e-43  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  36.28 
 
 
625 aa  168  2e-40  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  40.43 
 
 
303 aa  167  2.9999999999999998e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  38.75 
 
 
489 aa  167  2.9999999999999998e-40  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  39.84 
 
 
390 aa  167  4e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  36.61 
 
 
573 aa  165  1.0000000000000001e-39  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  35.94 
 
 
567 aa  160  3e-38  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  33.64 
 
 
545 aa  159  1e-37  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  35.13 
 
 
453 aa  151  2e-35  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  36.18 
 
 
491 aa  152  2e-35  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  35.57 
 
 
414 aa  150  5e-35  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  32.33 
 
 
549 aa  149  1.0000000000000001e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0588  putative transcriptional regulator  30.55 
 
 
432 aa  146  8.000000000000001e-34  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.952975 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  35.46 
 
 
521 aa  145  1e-33  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  37.5 
 
 
420 aa  145  2e-33  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  36.4 
 
 
560 aa  144  3e-33  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  31.71 
 
 
732 aa  144  3e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  34.94 
 
 
676 aa  144  3e-33  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  34.39 
 
 
481 aa  143  5e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  31.37 
 
 
382 aa  143  8e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  40.09 
 
 
468 aa  143  8e-33  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  32.92 
 
 
522 aa  141  3e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  34.04 
 
 
584 aa  140  7e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  34.78 
 
 
481 aa  139  8.999999999999999e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  31.42 
 
 
480 aa  139  1e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  29.23 
 
 
468 aa  139  1e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  30.66 
 
 
478 aa  138  2e-31  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  32.89 
 
 
520 aa  134  3.9999999999999996e-30  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  34.53 
 
 
497 aa  134  3.9999999999999996e-30  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  33.21 
 
 
618 aa  134  3.9999999999999996e-30  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  34.83 
 
 
493 aa  134  5e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  31.66 
 
 
684 aa  133  6e-30  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  32.38 
 
 
530 aa  133  6.999999999999999e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  31.23 
 
 
619 aa  132  9e-30  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  30.52 
 
 
400 aa  132  1.0000000000000001e-29  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  34.46 
 
 
493 aa  132  1.0000000000000001e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  35.59 
 
 
506 aa  132  2.0000000000000002e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  38.84 
 
 
490 aa  130  7.000000000000001e-29  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  38.84 
 
 
490 aa  130  7.000000000000001e-29  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  38.84 
 
 
490 aa  129  8.000000000000001e-29  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  27.3 
 
 
1336 aa  129  9.000000000000001e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  34.32 
 
 
410 aa  127  5e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  31.44 
 
 
512 aa  127  5e-28  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  28.75 
 
 
734 aa  126  8.000000000000001e-28  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  33.45 
 
 
517 aa  126  1e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  30.65 
 
 
406 aa  125  2e-27  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_009338  Mflv_1666  cell envelope-related transcriptional attenuator  31.86 
 
 
649 aa  124  3e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  35.29 
 
 
362 aa  124  5e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  35.1 
 
 
526 aa  122  9.999999999999999e-27  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_06070  cell envelope-related function transcriptional attenuator common domain protein  31.29 
 
 
514 aa  121  1.9999999999999998e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.974325  normal  0.0563121 
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  31.16 
 
 
540 aa  122  1.9999999999999998e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  33.86 
 
 
349 aa  122  1.9999999999999998e-26  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  29.35 
 
 
417 aa  121  3e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5087  cell envelope-related transcriptional attenuator  31.35 
 
 
687 aa  121  3e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13874  transcriptional regulator  57.8 
 
 
137 aa  120  4.9999999999999996e-26  Mycobacterium tuberculosis F11  Bacteria  normal  0.0355258  normal 
 
 
-
 
NC_013521  Sked_08580  cell envelope-related function transcriptional attenuator common domain protein  30.81 
 
 
396 aa  120  4.9999999999999996e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.783991  normal  0.393457 
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  32.12 
 
 
374 aa  120  4.9999999999999996e-26  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  32.39 
 
 
395 aa  120  6e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4511  transcription attenuator LytR  34.45 
 
 
358 aa  120  6e-26  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  31.8 
 
 
465 aa  119  9.999999999999999e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_008146  Mmcs_4513  cell envelope-related transcriptional attenuator  30.19 
 
 
699 aa  118  1.9999999999999998e-25  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  31.21 
 
 
395 aa  118  1.9999999999999998e-25  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  32.75 
 
 
520 aa  118  1.9999999999999998e-25  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_008705  Mkms_4600  cell envelope-related transcriptional attenuator  30.19 
 
 
699 aa  118  1.9999999999999998e-25  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4896  cell envelope-related transcriptional attenuator  30.19 
 
 
701 aa  118  1.9999999999999998e-25  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  33.2 
 
 
538 aa  118  3e-25  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  31.39 
 
 
516 aa  118  3e-25  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  35.02 
 
 
419 aa  117  3e-25  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_008148  Rxyl_1540  cell envelope-related transcriptional attenuator  40.84 
 
 
328 aa  117  6e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.112437  n/a   
 
 
-
 
NC_009921  Franean1_5903  cell envelope-related transcriptional attenuator  31.42 
 
 
508 aa  116  8.999999999999998e-25  Frankia sp. EAN1pec  Bacteria  normal  normal  0.667474 
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  34.98 
 
 
380 aa  115  1.0000000000000001e-24  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  32.52 
 
 
377 aa  115  1.0000000000000001e-24  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
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