| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0931 |
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| Symbol | |
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| ID | 5170620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 953856 |
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| End bp | 955049 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640563449 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_001244525 |
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| Protein GI | 148270065 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00105119 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTGAAGA AAATCTTTCT GTCACTTTCA ATTAGTTTAG CCTTCTTTTT AATTATATCA
TCCTTCTTTT TACTGGATAA GATGGTATCT TATCTCTTCA AGGGTGAGGT GAAAAACCCT
TACGTGTTTC TCGTTCTGGG AAAAGATAAA GAGATCGAAC ACACCGTTCG AACCGATGTG
ATAGTTGTTG GTGTGCTGGA CTGGAAAAAA GGAAATCTCT CTTTTGTATC GATACCCAGG
GATTTGATGA TAGAGGGAAA AAAGATCAAC GCGATTTACA ACACTTATGG AATGGAAAAA
CTATTTCAGA TCATCGAATC ACTTCTGGGA CAGAAGCCGG ATTCTTACGT GATATTCAAC
TACGAGGCTT TCAAAATACT CGGGGATGAA CTGGGACCAA TAGAGGTGAT ACCGAACGAG
GTCATGTTTT ATGAAGATCT GTCGCAGAAT CTCGTCATAG ATTTCAAACC TGGGGTTCCT
TACAAATTGA ATGGAGAACA GCTTCTTGCG TACATAAGAT ACAGAAAAGA CTCCATGGGG
GATCTTGCCC GAATAGAAAG ACAGAAGGAT GTACTGAAGA AACTCCTCAG CAAGGCCCTT
TCAAGAAATC CTCTCGAAAT TTCCGTACTT TACAAAAAGA TAAGTCCTTA CATCGAAACG
GATATCGGTC TTCCAGAGAT TCTAACACTC TTTTCTAAAT TGAAAAACAG TGTTAGGGTG
AGCTTTTCGA CACTTCCGTA CAAGGTGGAT AGCGACGGAA GCATCTTTGT GGATGAAAAA
AGACTCGTTT CTTTCAAAGA GAATCTCATT GGAAGCAGTG TTCAGGAAAA ATACCGCGTG
AACTTCCTCG TTGTGAACAC CTCATCGCTT GTTTCGAGGG TATTCGAAGC CAACCTGAGG
GGAGTGTGGA AAGACAGGGT TGGATTCGAA CCGGACCGTG TTGTCTGGGA AGACGTGGGA
ATATCGCAGA AATTCGAGGG AGACCATGTC TTCATAGGGG AACCGGAAAA GGAGGACTAT
ATCCTGGAAA TTCTGAGGAA AGCGCATCCT TCCAGGCATT TTACGGTGCA CAGGTTCGAC
AGACCGGAAG ATTACACGAT GTACTACACG ATACTGGAAA GCCTCGCAAA GAACAGAATA
TATCCCGATT TTCCGGTATC TGCTTTGATT CTGATAGACG ATTTCAGGGA GTGA
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| Protein sequence | MLKKIFLSLS ISLAFFLIIS SFFLLDKMVS YLFKGEVKNP YVFLVLGKDK EIEHTVRTDV
IVVGVLDWKK GNLSFVSIPR DLMIEGKKIN AIYNTYGMEK LFQIIESLLG QKPDSYVIFN
YEAFKILGDE LGPIEVIPNE VMFYEDLSQN LVIDFKPGVP YKLNGEQLLA YIRYRKDSMG
DLARIERQKD VLKKLLSKAL SRNPLEISVL YKKISPYIET DIGLPEILTL FSKLKNSVRV
SFSTLPYKVD SDGSIFVDEK RLVSFKENLI GSSVQEKYRV NFLVVNTSSL VSRVFEANLR
GVWKDRVGFE PDRVVWEDVG ISQKFEGDHV FIGEPEKEDY ILEILRKAHP SRHFTVHRFD
RPEDYTMYYT ILESLAKNRI YPDFPVSALI LIDDFRE
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