| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1715 |
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| Symbol | |
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| ID | 4439102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1693972 |
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| End bp | 1695096 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639673533 |
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| Product | transcriptional regulator |
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| Protein accession | YP_815474 |
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| Protein GI | 116630269 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.00565214 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGACCAG ATGAACCTAA TAAACCAAAT AAAAAACTAG AAAGAAATAA TGTTTTTGCG
GCGAACAAAA AAGACATTAA GAATGGAAAT AACTTTGCTC GCCTGGTGGG GCTCTTAACA
ATTCTACTTG TTTGCGGAAG TGTTGCATAT TTTGCTCATG CCTATTTCTC AGCTATGAGT
TCAGTGCAGC AGGCTTATCG CGGGACTGGA AAAACTTCAC AGTTAATTTC TCAGAAGAAA
CCAATCTCTA TTTTAATTCT TGGGGTTGAT CAAGGAATTG AGGGTAGGCA CGATCGCGGA
AATTCAGATA CGATGATCTT AGCAACTATG AATCCACAGA AAAAAGAGGC AACGATGACA
TCAATTCCTA GGGACTTGCT TGCTGATATT AAGGGAGATG GTAAGGGCGA AGGACGATAC
TATATGTTCC GAGTCAATTC AGCTTATCAA GTTGGTGGCA GTAAAGGAGC CACACGAACG
GTTAGAGCGC TATTAAACAC ACCAGTTAAT TATTACATGG AAGTTAATAT GAAGGCCTTA
GAGAGCATGG TAGAGGCCCT AGGCGGAGTA GATGTTAATG TTCCGTTTAC TTTTACTTAT
CACACGCATT TTAAGAAGGG TAAGCAGCAT TTGAATGGTA AAGAGGCTTT AGACTACGTT
CGAATGCGCA AAGAGGATCC TAAAGGCGAT TACGGCCGGC AAATGCGACA AAGACAGGTT
ATTAATGACA TTGTACGTAA AGGGATGTCG GTTAACTCAA TTACAAATTA TCGTAAAATT
CTCAAAGTCT TTGCCAAATA TGTTAAAACT AACCTAACTT TTGATGATAT GCTTTCAATT
GCAATGAACT ATCGTGGTTG TACACAGGAT ATCAAGAGTG GTTATATTCA TGGACATAAC
GTTTGGATTG GTTCTGCTGC AATGCAAGTA GCTTCTACTA AAGAATTACA GCGCGTTTCA
GATTTAGTTC GGTCTAGCTT AGGCTTAAAG AAAGAAAAAT TACGTAATCA AGAAACGAGA
CAAAATAGTC TACAGCAAGG ACTAGATTGG AATGATCCAG AAGACTTTAG AAATTATATT
ATTTATGACA AAGATTCTGA TACAATTCCA TGGGATGGAA ATTAA
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| Protein sequence | MRPDEPNKPN KKLERNNVFA ANKKDIKNGN NFARLVGLLT ILLVCGSVAY FAHAYFSAMS
SVQQAYRGTG KTSQLISQKK PISILILGVD QGIEGRHDRG NSDTMILATM NPQKKEATMT
SIPRDLLADI KGDGKGEGRY YMFRVNSAYQ VGGSKGATRT VRALLNTPVN YYMEVNMKAL
ESMVEALGGV DVNVPFTFTY HTHFKKGKQH LNGKEALDYV RMRKEDPKGD YGRQMRQRQV
INDIVRKGMS VNSITNYRKI LKVFAKYVKT NLTFDDMLSI AMNYRGCTQD IKSGYIHGHN
VWIGSAAMQV ASTKELQRVS DLVRSSLGLK KEKLRNQETR QNSLQQGLDW NDPEDFRNYI
IYDKDSDTIP WDGN
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