| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1145 |
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| Symbol | |
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| ID | 8323215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1192447 |
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| End bp | 1194078 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644952273 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_003109751 |
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| Protein GI | 256371927 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCAAC CAGACCCTAC GCCAGCCATG CCCCGAGCCC AGCGACGTCG AGTATCGAAG
CGACTTCGGC GCCGACGCCG CCTCGTCATC TCCCTCGCCA CCGTTCTCGC GCTCATCGTG
CTGATCGGCG CGGGCAGTTA CCTCTACATC CGCTATCGCT TCGGCCAGAT CGGACACGTG
TCGGTCGGCG GGCTCACGGC GCAGAGCTCC GGTCCCGAGA ACATCCTGCT CGTCGGGAAC
AATTCACGGT GCACGTTGAC GAAGTACTCA TCGTTCTACT CGAAGGGCTC ACAGCACTTC
GGCACCTGCA GCGAGGTTGG TGGTGGTCGC AGTGACGTGA CGATGGTCCT ACACGTCGAT
CCAGCGACGC ACCGCGCCTA CCTGCTGTCC ATCCCGCGAG ATCTCTGGCT GCCCATGCCG
AACGGCAACG GACTCGAACT CCGTGTCGAC GATGCGCTCA ACTCCGCCGA GCGCCCCTAT
CTCCACCTGC CCTTCGGACC GACCTTGCTC GTCAAGACGA TCGAGCAAGA CCTCGGCATT
CCCATCAACC ACTACGTGGA GTTGAACTTC TACACCTTCG AGCAAGTCGT CAACACGCTC
GGCGGCGTCA CACTCGACTT CCCGACCAAG CTCGTCGACC ACTACTCCGG CCTCAACATC
ACGACGACGG GCTGCCAGCA CCTCACCGGC ACGCAAGCCC TCGCGCTCGT TCGAGCACGA
CACCTGTACT ACTACAACCC CTCCACCGGG ACCTGGGACT ACGACGGCAC GGGTGACCTC
GGACGCATCG TGCGAACCCA CATCTTCCTT CGAGCCCTGG CCAGTCAGGT GAAGAGCTCG
GCACTCTCGA ACCCGATCAC GGCCAACGCG CTCCTCGGCT CCCTGCTGCC GGCGCTCAAG
GTCGACCCGT CGTTCTCCCT CTCGGACATG GTGAGCCTCG CGCTTGCCTT CCGACACGTC
AACCCTGGCT CGATCCCGAG CGCGACGTTG CCCGTGATCA TCCCCTCCCA GAGCACGTTC
ACCGACCCTG CGAACCCGTC CAACTATCAG GCGCCGGGCT CCATCGTCAT GCCGTGGGCC
CAGAGCGACC TATCGGTCAT TCGCCAGTTC CTCGGCTCTG AGGCCCCCAA CCTCAACGCC
ATTCGTCCAG CCTCCGTCAC GGTCGCGGTA CGCGACGCAA GTGGTGTTGG CAACGGTAGC
CAGCTCGTCG CTGGACTCTC CCAGCTTGGG TTTCCAACGA CCAACCTCGG TACCGCAACC
TACGCCGGCA CCGACTCCGA GACCGTCGTC GCCTACAAGC CCGGCATGCT CGCCCAAGGC
GAGCGCGTGC TCGCCAGCCT GTCTGGCCAG GCAGTCCTTG CCGAGGGCTC GGCAAATCAG
CCCGCCGACG TGGTCATCAC CGCTGGATCG ACGATCGCCA CCACCGCAAC CTCGGCCCAG
ACCGCAGCCC TGACGACAAC CTCGGCACCG ACCGCCACGC TCACCGCCAC CTCGACGACC
ACACCACCGG TGGGAACGCT CGTGACCTCG ACGCAGAGCC TCCAGCAACT CGCCTCGTCG
AACCTGTGGC AGGCCAACGC GAGTGGGTCC GAGTTCTGGT GGGATCCACG TCTGTGCCCC
GCCCACGCCT AG
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| Protein sequence | MTQPDPTPAM PRAQRRRVSK RLRRRRRLVI SLATVLALIV LIGAGSYLYI RYRFGQIGHV
SVGGLTAQSS GPENILLVGN NSRCTLTKYS SFYSKGSQHF GTCSEVGGGR SDVTMVLHVD
PATHRAYLLS IPRDLWLPMP NGNGLELRVD DALNSAERPY LHLPFGPTLL VKTIEQDLGI
PINHYVELNF YTFEQVVNTL GGVTLDFPTK LVDHYSGLNI TTTGCQHLTG TQALALVRAR
HLYYYNPSTG TWDYDGTGDL GRIVRTHIFL RALASQVKSS ALSNPITANA LLGSLLPALK
VDPSFSLSDM VSLALAFRHV NPGSIPSATL PVIIPSQSTF TDPANPSNYQ APGSIVMPWA
QSDLSVIRQF LGSEAPNLNA IRPASVTVAV RDASGVGNGS QLVAGLSQLG FPTTNLGTAT
YAGTDSETVV AYKPGMLAQG ERVLASLSGQ AVLAEGSANQ PADVVITAGS TIATTATSAQ
TAALTTTSAP TATLTATSTT TPPVGTLVTS TQSLQQLASS NLWQANASGS EFWWDPRLCP
AHA
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