More than 300 homologs were found in PanDaTox collection
for query gene Tpau_1061 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  100 
 
 
567 aa  1131    Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  51.29 
 
 
676 aa  417  9.999999999999999e-116  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  53.48 
 
 
490 aa  415  1e-114  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  53.48 
 
 
490 aa  415  1e-114  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  53.48 
 
 
490 aa  415  1e-114  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  50.44 
 
 
493 aa  399  9.999999999999999e-111  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  50.43 
 
 
497 aa  397  1e-109  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  48.9 
 
 
493 aa  398  1e-109  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  43.45 
 
 
522 aa  363  4e-99  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  43.92 
 
 
732 aa  334  3e-90  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  44.15 
 
 
517 aa  304  3.0000000000000004e-81  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  37.12 
 
 
538 aa  302  1e-80  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  45.85 
 
 
410 aa  297  4e-79  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4212  cell envelope-related transcriptional attenuator  37.37 
 
 
496 aa  278  2e-73  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.134321 
 
 
-
 
NC_013159  Svir_06070  cell envelope-related function transcriptional attenuator common domain protein  41.37 
 
 
514 aa  258  2e-67  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.974325  normal  0.0563121 
 
 
-
 
NC_009565  TBFG_13519  hypothetical protein  35.91 
 
 
512 aa  251  2e-65  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.100718 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  43.42 
 
 
521 aa  249  8e-65  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_014158  Tpau_1296  cell envelope-related transcriptional attenuator  38.84 
 
 
414 aa  243  9e-63  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8771  cell envelope-related transcriptional attenuator  33.27 
 
 
547 aa  214  2.9999999999999995e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.359858 
 
 
-
 
NC_013131  Caci_7119  cell envelope-related transcriptional attenuator  39.88 
 
 
382 aa  207  4e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1912  cell envelope-related transcriptional attenuator  34.46 
 
 
664 aa  194  4e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  34.9 
 
 
491 aa  185  2.0000000000000003e-45  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_013093  Amir_1299  cell envelope-related transcriptional attenuator  37.05 
 
 
340 aa  181  2.9999999999999997e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  31.84 
 
 
545 aa  175  1.9999999999999998e-42  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  36.69 
 
 
468 aa  171  4e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  30.77 
 
 
509 aa  171  5e-41  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  35.34 
 
 
420 aa  167  4e-40  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  34.97 
 
 
414 aa  166  1.0000000000000001e-39  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  28.06 
 
 
497 aa  162  1e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  34.36 
 
 
486 aa  163  1e-38  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  30.2 
 
 
505 aa  162  2e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  35.56 
 
 
390 aa  161  3e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  35.07 
 
 
625 aa  160  8e-38  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  26.87 
 
 
478 aa  159  1e-37  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  39.53 
 
 
336 aa  158  2e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  38.06 
 
 
466 aa  159  2e-37  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  31.87 
 
 
516 aa  158  3e-37  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  31.06 
 
 
573 aa  157  6e-37  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  33.24 
 
 
520 aa  155  1e-36  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  35.94 
 
 
409 aa  156  1e-36  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  34.69 
 
 
512 aa  155  2e-36  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  36.73 
 
 
311 aa  154  2.9999999999999998e-36  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  36.73 
 
 
311 aa  154  2.9999999999999998e-36  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  36.03 
 
 
306 aa  153  8e-36  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  30.48 
 
 
618 aa  152  1e-35  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  36.39 
 
 
311 aa  152  1e-35  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  28.43 
 
 
504 aa  149  2.0000000000000003e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  31.24 
 
 
520 aa  148  3e-34  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  37.92 
 
 
307 aa  148  3e-34  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  37.5 
 
 
307 aa  147  4.0000000000000006e-34  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  30.83 
 
 
530 aa  147  4.0000000000000006e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  36.26 
 
 
407 aa  145  2e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_013159  Svir_09620  cell envelope-related function transcriptional attenuator common domain protein  35.66 
 
 
353 aa  143  7e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.369888 
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  31.33 
 
 
394 aa  142  1.9999999999999998e-32  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  34.73 
 
 
463 aa  141  3.9999999999999997e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  32.03 
 
 
468 aa  140  4.999999999999999e-32  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  31.89 
 
 
481 aa  140  7.999999999999999e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  30.9 
 
 
400 aa  140  7.999999999999999e-32  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  34.2 
 
 
404 aa  138  3.0000000000000003e-31  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  34.08 
 
 
393 aa  138  3.0000000000000003e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  29.5 
 
 
506 aa  136  9e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  26.9 
 
 
734 aa  136  9.999999999999999e-31  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  29.33 
 
 
526 aa  135  1.9999999999999998e-30  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  31.08 
 
 
549 aa  135  1.9999999999999998e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  37.23 
 
 
320 aa  134  3e-30  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  29.91 
 
 
481 aa  133  1.0000000000000001e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3559  cell envelope-related transcriptional attenuator  33.94 
 
 
352 aa  132  1.0000000000000001e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  0.153801  n/a   
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  29.34 
 
 
584 aa  131  3e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  28.01 
 
 
684 aa  130  5.0000000000000004e-29  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  36.52 
 
 
326 aa  129  2.0000000000000002e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  27.13 
 
 
453 aa  128  3e-28  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  30.12 
 
 
560 aa  126  9e-28  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  27.68 
 
 
406 aa  126  9e-28  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  32.31 
 
 
303 aa  126  1e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  33.33 
 
 
434 aa  124  4e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  28.92 
 
 
487 aa  123  9e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  32.52 
 
 
395 aa  122  9.999999999999999e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4976  cell envelope-related transcriptional attenuator  31.25 
 
 
551 aa  123  9.999999999999999e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  31.72 
 
 
434 aa  121  3e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  28.85 
 
 
499 aa  120  4.9999999999999996e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  31.45 
 
 
489 aa  120  9e-26  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  34.8 
 
 
424 aa  119  9.999999999999999e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_009077  Mjls_4896  cell envelope-related transcriptional attenuator  28.69 
 
 
701 aa  119  9.999999999999999e-26  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  27.42 
 
 
1336 aa  118  1.9999999999999998e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  32.04 
 
 
363 aa  118  3e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  29.68 
 
 
521 aa  118  3e-25  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_009953  Sare_5021  cell envelope-related transcriptional attenuator  31.95 
 
 
312 aa  118  3e-25  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00237783 
 
 
-
 
NC_008146  Mmcs_4513  cell envelope-related transcriptional attenuator  29 
 
 
699 aa  117  6.9999999999999995e-25  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4600  cell envelope-related transcriptional attenuator  29 
 
 
699 aa  117  6.9999999999999995e-25  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  27 
 
 
382 aa  116  1.0000000000000001e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  25.95 
 
 
512 aa  115  2.0000000000000002e-24  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  28.57 
 
 
362 aa  115  2.0000000000000002e-24  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  34.3 
 
 
404 aa  114  4.0000000000000004e-24  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  29.82 
 
 
480 aa  114  7.000000000000001e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_009921  Franean1_5903  cell envelope-related transcriptional attenuator  28.94 
 
 
508 aa  112  1.0000000000000001e-23  Frankia sp. EAN1pec  Bacteria  normal  normal  0.667474 
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  27.91 
 
 
442 aa  112  1.0000000000000001e-23  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2383  cell envelope-related transcriptional attenuator  29.29 
 
 
389 aa  112  2.0000000000000002e-23  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0868762  hitchhiker  0.00772059 
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  29.92 
 
 
643 aa  110  5e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  30.04 
 
 
379 aa  110  7.000000000000001e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1666  cell envelope-related transcriptional attenuator  26.73 
 
 
649 aa  109  1e-22  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
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