| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_06070 |
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| Symbol | |
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| ID | 8385945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 621009 |
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| End bp | 622553 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974704 |
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| Product | cell envelope-related function transcriptional attenuator common domain protein |
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| Protein accession | YP_003132505 |
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| Protein GI | 257054673 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.974325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0563121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACAAGG GTGAGAAGCG CCCTACCACC GAGGGCGAGG AACACGAGGG AGCTTCGCCC
GGCCAGATCG AGTCCGAACA TGGGCCCGAC GCGCGGTCCG ATTCCGACGG CGGCATGATC
CCCGATCGAA GCGACACCGA CGCGGCCGAC ACCGACTCCC ACCCCGGAAG CGACGACAGC
GAGAACAGCG ACAGGGACCA CGACGGCGAC GACGGTGACG GCGCTGGCAG TGGTCCCGGC
GCGCGAACCG AACCGGAGAC CGCCGAGGAA ACCGGGGAAT CCGGGGCGGG GGAATCCGCT
CGAGGGCCCG CCGAGGAGCC GGACGCCGCG AGCAGAGCCC CGACCCGTGG ACGGGGTCGC
AACCGCGGCC GGAAAGCCGC GAAGGCCCTG GTCCGTTCGG TGGGCGCTCT GCTGTCGGTG
ATCGCGCTGG CCATCACCGG CTACGCCTAC TCCACGCTGG ACACCCTCCA GGACAACGTC
AACACCACCG ACGCGTTGCG GCAGAACGAC GAACCGGACG ACGGCGAACC CCCACCGCCT
CCCGAGGACG ACGGCGCCAC CGACATCCTG CTCGTGGGTA CCGATGCGCG CACCGACATG
GAGGGCAATC CCCTCCCGCC GCACGTACTC AGACAACTGC GCACCGAGAA CAAGCCCGGC
ATCAGCACGG ACACCCTGAT CCTGCTGCGG ATCCCGCACG ACGGCGCGCC CCCGACCGGG
ATCTCGATTC CCCGCGACAC CTGGGTCGCG GTGTCCGGCG ACGAACACGC CAAGATCAAT
TCGGTGTACG GCACGGAGAA GTACCGGACC GCCAACGAAC TACGCCGGGA AGGCGTCACC
GATCGCTCCG AAGTGGAACG CCGATCCGAC CAGGCGGGCC GTGCGGCGCT GGTGCGCACG
GTGCAGGAAT TCACCCAGGT CCGCATCGAC CACTACGCCG AGGTGAACCT CTTCGGTTTC
TACCTGATCA CCGAGGCACT CGACGGCGTG GAGGTGTGTC TCAACCACGC CACGTTCGAC
ACCGACTCCG GTGCCAATTT CGCGGCCGGA CGGCAGACCG TCTCCGGCGG GGAGGCGCTG
TCGTTCGTAC GGCAACGCAA CAATCTGCCC CGCGGTGACC TCGACCGGAT CCAGCGGCAA
CAGGCGTTCT TGGCGTCCGC GCTCAACAAG GTGTTGTCGG CGGGCACTCT CACCGACACC
GGCAAGTTGA AGAAGCTGGC CAACGCCCTG CGACGCTCGC TGGTCCTGGA CTCCGACCTG
GACCTGCTGA AGTTCGCCAG GCAAACCCGC GGGATCGCGT CGGGGGACTT CTCGTTCGTC
ACGATCCCCG TCGTCGACAT CGCCGCGTGG AGCCCGGACG GGAAGCAGAG CATCGTGCAG
GTCGACGTGG AGGAAGTACG GAAGTTCATC GCCGGTGTCG TGGAGCAGGG CGACGGACGA
GGCCGGGACG ACCGGACGGC GGGGGAACGA CCTTCCGGGG GTGGATCGGC ACCGCAGAAC
GACGGCACAA AGATCACCGC CGACGGCGTG ACGTGTGTGA ACTGA
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| Protein sequence | MDKGEKRPTT EGEEHEGASP GQIESEHGPD ARSDSDGGMI PDRSDTDAAD TDSHPGSDDS
ENSDRDHDGD DGDGAGSGPG ARTEPETAEE TGESGAGESA RGPAEEPDAA SRAPTRGRGR
NRGRKAAKAL VRSVGALLSV IALAITGYAY STLDTLQDNV NTTDALRQND EPDDGEPPPP
PEDDGATDIL LVGTDARTDM EGNPLPPHVL RQLRTENKPG ISTDTLILLR IPHDGAPPTG
ISIPRDTWVA VSGDEHAKIN SVYGTEKYRT ANELRREGVT DRSEVERRSD QAGRAALVRT
VQEFTQVRID HYAEVNLFGF YLITEALDGV EVCLNHATFD TDSGANFAAG RQTVSGGEAL
SFVRQRNNLP RGDLDRIQRQ QAFLASALNK VLSAGTLTDT GKLKKLANAL RRSLVLDSDL
DLLKFARQTR GIASGDFSFV TIPVVDIAAW SPDGKQSIVQ VDVEEVRKFI AGVVEQGDGR
GRDDRTAGER PSGGGSAPQN DGTKITADGV TCVN
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