More than 300 homologs were found in PanDaTox collection
for query gene Caci_7541 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  100 
 
 
540 aa  1086    Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  38 
 
 
487 aa  294  3e-78  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  39.72 
 
 
499 aa  288  2e-76  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  38.14 
 
 
521 aa  284  3.0000000000000004e-75  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  32.91 
 
 
468 aa  220  6e-56  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  38.01 
 
 
379 aa  214  2.9999999999999995e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  34.11 
 
 
520 aa  212  1e-53  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  39.87 
 
 
395 aa  202  9.999999999999999e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  35.03 
 
 
618 aa  200  5e-50  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  33.24 
 
 
478 aa  196  1e-48  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  37.41 
 
 
506 aa  193  9e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  33.17 
 
 
643 aa  192  2e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08570  cell envelope-related function transcriptional attenuator common domain protein  35.54 
 
 
365 aa  187  4e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.671315  normal  0.595892 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  34.03 
 
 
481 aa  186  1.0000000000000001e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  35.09 
 
 
480 aa  181  2.9999999999999997e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  31.23 
 
 
400 aa  181  4e-44  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  35.57 
 
 
406 aa  180  5.999999999999999e-44  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  31.52 
 
 
481 aa  178  3e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  33.51 
 
 
453 aa  177  3e-43  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  29.58 
 
 
530 aa  174  2.9999999999999996e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  31.59 
 
 
549 aa  174  3.9999999999999995e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  32.63 
 
 
417 aa  173  9e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  34.46 
 
 
395 aa  169  8e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  29.59 
 
 
468 aa  169  9e-41  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  33.41 
 
 
505 aa  167  5.9999999999999996e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_014151  Cfla_2383  cell envelope-related transcriptional attenuator  33.93 
 
 
389 aa  160  8e-38  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0868762  hitchhiker  0.00772059 
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  31.96 
 
 
442 aa  158  3e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08580  cell envelope-related function transcriptional attenuator common domain protein  33.23 
 
 
396 aa  157  3e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.783991  normal  0.393457 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  34.95 
 
 
504 aa  157  6e-37  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  36.51 
 
 
390 aa  154  2.9999999999999998e-36  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  31.88 
 
 
584 aa  152  1e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  34.23 
 
 
509 aa  151  3e-35  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  32.42 
 
 
491 aa  150  4e-35  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  30.15 
 
 
465 aa  151  4e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_013174  Jden_1864  cell envelope-related transcriptional attenuator  29.84 
 
 
391 aa  150  5e-35  Jonesia denitrificans DSM 20603  Bacteria  normal  0.383316  normal  0.036217 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  37.8 
 
 
512 aa  147  4.0000000000000006e-34  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  33.42 
 
 
573 aa  144  3e-33  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  29.18 
 
 
497 aa  143  8e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4976  cell envelope-related transcriptional attenuator  31.23 
 
 
551 aa  142  9.999999999999999e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  32.3 
 
 
521 aa  141  3.9999999999999997e-32  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_009338  Mflv_1666  cell envelope-related transcriptional attenuator  30.16 
 
 
649 aa  140  6e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3844  cell envelope-related protein transcriptional attenuator  29.65 
 
 
373 aa  139  2e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  29.63 
 
 
560 aa  137  5e-31  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_009077  Mjls_4896  cell envelope-related transcriptional attenuator  29.62 
 
 
701 aa  134  6e-30  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4513  cell envelope-related transcriptional attenuator  29.4 
 
 
699 aa  133  6.999999999999999e-30  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4600  cell envelope-related transcriptional attenuator  29.4 
 
 
699 aa  133  6.999999999999999e-30  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  31.17 
 
 
516 aa  132  1.0000000000000001e-29  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  29.07 
 
 
545 aa  132  1.0000000000000001e-29  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  33.2 
 
 
486 aa  132  1.0000000000000001e-29  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  28.28 
 
 
734 aa  133  1.0000000000000001e-29  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  31.05 
 
 
414 aa  132  2.0000000000000002e-29  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_008726  Mvan_5087  cell envelope-related transcriptional attenuator  30.54 
 
 
687 aa  131  3e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3214  cell envelope-related transcriptional attenuator  28.07 
 
 
443 aa  129  1.0000000000000001e-28  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00000235319 
 
 
-
 
NC_009565  TBFG_13519  hypothetical protein  27.87 
 
 
512 aa  129  1.0000000000000001e-28  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.100718 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  33.33 
 
 
625 aa  128  2.0000000000000002e-28  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  35.38 
 
 
349 aa  129  2.0000000000000002e-28  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  35.66 
 
 
520 aa  128  3e-28  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  33.82 
 
 
320 aa  127  4.0000000000000003e-28  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0589  putative transcriptional regulator  32.4 
 
 
498 aa  127  6e-28  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.581304 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  31.02 
 
 
362 aa  127  6e-28  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  33.33 
 
 
409 aa  125  2e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  32.9 
 
 
381 aa  124  3e-27  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  32.51 
 
 
420 aa  125  3e-27  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5903  cell envelope-related transcriptional attenuator  32.45 
 
 
508 aa  123  9.999999999999999e-27  Frankia sp. EAN1pec  Bacteria  normal  normal  0.667474 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  32.84 
 
 
732 aa  121  3.9999999999999996e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  32.25 
 
 
326 aa  120  4.9999999999999996e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_013530  Xcel_1025  cell envelope-related transcriptional attenuator  31.9 
 
 
434 aa  120  4.9999999999999996e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.11457  n/a   
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  31.97 
 
 
466 aa  120  4.9999999999999996e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  28.99 
 
 
410 aa  120  7.999999999999999e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  33.47 
 
 
393 aa  119  1.9999999999999998e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  29.96 
 
 
619 aa  117  5e-25  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  37.26 
 
 
336 aa  117  7.999999999999999e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_013235  Namu_4212  cell envelope-related transcriptional attenuator  28.6 
 
 
496 aa  116  8.999999999999998e-25  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.134321 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  35.95 
 
 
311 aa  115  1.0000000000000001e-24  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  35.95 
 
 
311 aa  115  1.0000000000000001e-24  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  35.95 
 
 
311 aa  116  1.0000000000000001e-24  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  32.65 
 
 
377 aa  115  2.0000000000000002e-24  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  36.57 
 
 
434 aa  114  3e-24  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  26.82 
 
 
538 aa  114  4.0000000000000004e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_013235  Namu_4529  cell envelope-related transcriptional attenuator  32.32 
 
 
365 aa  114  4.0000000000000004e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  0.25457  normal 
 
 
-
 
NC_013521  Sked_00540  cell envelope-related function transcriptional attenuator common domain protein  31.07 
 
 
357 aa  114  6e-24  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.916603  normal  0.105126 
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  28.45 
 
 
526 aa  114  7.000000000000001e-24  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  27.21 
 
 
567 aa  113  9e-24  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  36.41 
 
 
307 aa  112  1.0000000000000001e-23  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  27.27 
 
 
684 aa  112  2.0000000000000002e-23  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  27.55 
 
 
522 aa  110  5e-23  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  31.2 
 
 
676 aa  108  2e-22  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  31.22 
 
 
404 aa  108  3e-22  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  32.65 
 
 
374 aa  108  3e-22  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  30.85 
 
 
1336 aa  107  7e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4652  cell envelope-related transcriptional attenuator  25.7 
 
 
717 aa  106  9e-22  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  35.19 
 
 
434 aa  105  1e-21  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  26.95 
 
 
512 aa  105  2e-21  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_014158  Tpau_1296  cell envelope-related transcriptional attenuator  27.33 
 
 
414 aa  105  2e-21  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  32.48 
 
 
306 aa  105  2e-21  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_013131  Caci_7119  cell envelope-related transcriptional attenuator  31.86 
 
 
382 aa  105  3e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  33.82 
 
 
424 aa  104  3e-21  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  26.95 
 
 
517 aa  105  3e-21  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  27.51 
 
 
382 aa  103  6e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  28.57 
 
 
493 aa  103  9e-21  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
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