| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_37600 |
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| Symbol | |
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| ID | 8389081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4082519 |
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| End bp | 4084378 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977771 |
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| Product | cell envelope-related function transcriptional attenuator common domain protein |
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| Protein accession | YP_003135531 |
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| Protein GI | 257057699 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.760055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.249296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGCCGG AACTCCTACA CCAGGCCGGA GCGGGTGAGG CGCAGCCTCC GGTGGCGACT
CCACCCCCCG CGCCGCAGCG ACCGCACCAC CGTCCCGAGC GGGAGGAGGA CGAGCGTTCG
CTCGAAGACC GGCTGACGAT GACCGATCAG ATGGAGCCGG TCGACGACGC CACGAAGTAC
CGTCGCAAGA TCGACGAGTC GTTGGCGCGC TTCTCAGCCG CACACGACGA GCTGGAGGCC
GAGGAACGCA GGAAGCGGCA GCGGCGACAG CGTCTTTTGG AACAGACCAT GACCGCGTTC
CAGCGGGTGG TCCCGGTGGG GCCGAAGTCG CACAGGCGCA ACAACGCCCG GCGTAACCAC
ACAGACCCGG ACGACGACGG TGAGTCCGAA CGAGGCGGTC TCGTAGGTCT CGAAGGGGTC
GCCGGGTTCG GCGGCCTCGA AGCCGGTGCC GAAACCGATG CCGCACCGGA CGACGTGGAC
TCGGACGACA CCGAGTTGGT CCGGCTCGAA TCCGAAGAAA CCGAATCCGA CGAAACCGAT
TCGGACGGCG ACGGGTCGAA CGGCGCGAAC GGCCTGCGCA CCACCGAAGC GGATGACACA
GGCTCCGCCG GAACCGACTC GGATGAGTCC ACATCGGACC AAGATGGGTC GGAGACGCGG
GACCACGCCG AGCGCACCGG ACGGGACAGA CGCGCCGTAC TCGCGTCGAA GGCCGCCGTC
CTCGTCGTCG CGGTGCTCGT GTTCCTCGGC ACCGGGATCG GCTGGGGCGC CAAGACGTGG
TTCGAAGGCC AGGTCAACGA GATCCTCGCC CTGGACGAGG ACTCGGCCGA CATCAGGAAC
GCGTCCGCGC AGATCGGTGA CGCGAACTTC CTCATCGTCG GCTCCGACAC CAGGGAGGGC
GCGGAGGCCG AGGACAACGT CGGCTCCACG GAGTCGATCC AGGGTGCCCG GTCGGACACG
GTGATGCTCG CCCACATCCC GGAGGACCGG GAGCGCGTCG TGGTGATCTC CTTCCCCCGT
GACCTGGAGA TCACCAGACC CGAATGCCAG CGCTGGGATT CCGCCACGGG TGCCTACGGC
GAGACCGTCG GCCCGGCCGA GGCCGTGAAG CTCAACACCG CGTTCACCAT CGGCGGCCCC
CGGTGTCTGA CGAAGGTGAT CCAACAGATC AGCGGCGTGC GGATCAACCA TTTCGTCGGG
ATCGACTTCC AGGGCTTCAA GGGCATGGTC GACGCGGTCG GCGGGGTCAC GATGCACTTC
GAGGAGCCGA TGCGGGACGC CGAGCTCGGG TTGATCGTGG CGGAAACCGG CGATGTCCTG
CTCAAAGGCG AACAGGCGTT GAGCTTCGTG CGGGCGCGCA AGGTGTACGG CGACCCGACG
TTCTCCGACT ACGGTCGGAT GAAGCGCCAA CAGGATTTCC TCGCGTCGCT GCTGCGCAAG
GTGCTGTCCG GCGATGTGCT GCTCGACATG GGCAAACTGA CCAATTTCGC GCAGGCGTTC
GCCAGGTCCA CGTTCGGCGA GAACATCGGG GTCGACCAAA TGCTCACCTT GGCCCAGTCG
ATGAAGGGAC TGGACGCGGG CAAGGTCACG TTCCTCACGA TCCCGACGGT GGGTGAGGCC
AACGAGCGCG GCAACGAAGT GCTGCTGGAG TCGGAGGCCG CGAAGTTGTT CCAAGCGCTC
ATCGACAACA CCCCGCTACC GGGGGAGGAA GAGGAGCAGC AAGGCGCTCC CACACCGGAG
GCCGGAGCCG AGACGGGAAC ACCGCAACAA GCCGCCGCAC CGGTCGGACA GGCGTTGAAC
GCGGTTAACC GAGGCTTCAT TTCGCGGTAC GGCGTACGTG CTAACCCGCA CGTAGAGTGA
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| Protein sequence | MPPELLHQAG AGEAQPPVAT PPPAPQRPHH RPEREEDERS LEDRLTMTDQ MEPVDDATKY
RRKIDESLAR FSAAHDELEA EERRKRQRRQ RLLEQTMTAF QRVVPVGPKS HRRNNARRNH
TDPDDDGESE RGGLVGLEGV AGFGGLEAGA ETDAAPDDVD SDDTELVRLE SEETESDETD
SDGDGSNGAN GLRTTEADDT GSAGTDSDES TSDQDGSETR DHAERTGRDR RAVLASKAAV
LVVAVLVFLG TGIGWGAKTW FEGQVNEILA LDEDSADIRN ASAQIGDANF LIVGSDTREG
AEAEDNVGST ESIQGARSDT VMLAHIPEDR ERVVVISFPR DLEITRPECQ RWDSATGAYG
ETVGPAEAVK LNTAFTIGGP RCLTKVIQQI SGVRINHFVG IDFQGFKGMV DAVGGVTMHF
EEPMRDAELG LIVAETGDVL LKGEQALSFV RARKVYGDPT FSDYGRMKRQ QDFLASLLRK
VLSGDVLLDM GKLTNFAQAF ARSTFGENIG VDQMLTLAQS MKGLDAGKVT FLTIPTVGEA
NERGNEVLLE SEAAKLFQAL IDNTPLPGEE EEQQGAPTPE AGAETGTPQQ AAAPVGQALN
AVNRGFISRY GVRANPHVE
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