| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4511 |
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| Symbol | |
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| ID | 5061001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 5101597 |
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| End bp | 5102673 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640476778 |
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| Product | transcription attenuator LytR |
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| Protein accession | YP_001161317 |
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| Protein GI | 145597020 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAATCA CTCACAGACG GTGGCGGGGA GGAACCACGT CCAGGTCGAA GGGCGGACGG
GAGCGGGCCG ACGCGGGCGT CCGGCGCGGA CGACCACGCT GGGCCCGCCT CCTACTCGGC
CTCGGCCTCG CGCTGGTACT CCTGGCCGGC CTCGCCGCCG TCGGCCTCCA CCGGCTCACC
CAGCGGTACG ACAAGATGGT GACCCGGGAA GAACTACTCG ACTCGGGCGC CCGACGAGGC
CAGACGGACC TAAACGGACC GCTGAACTAC CTGCTGGTCG GCACCGACCG CTGGCGGAGT
AGCAGCAGCA CCGCCGACCG GCGATCGGAC ACCATCCTCA TCGTGCACGT GCCGGCCGGT
GGACGTGAGG CGTTCCTGAT GTCCATACCC CGAGACCTGC GGGTCACCAT CCCCGCCGCC
CACGGCTTCG GCGGCGGAGA AGACAAGATC AACGCCGCGT ACCAGCACGG TGGCGGAGGA
CAGTCCGGCA CCCGACTACT CTCCGCCACC ATCACCCAGC TCACCGACAT CCGCTTCGAC
GGCGCCGCCG TGGTCGACTT CTCCGGCTTC CGCGACGTGA TCGACCACCT CGGCGGCGTA
CGCATGTGCG TCGACACCGA GTTCCGCTCG ATCCACACCG ACCGGGTCTT CACCCCCGGC
TGCCAGGAGA TGGACGGCGG CACCGCGCTG GACTTCGTCC GCCAGCGTTA CGACCTACCC
AACGGCGACT ACGACCGGCA GACCCACCAG CAGCAACTGC TCCGAGCGGT ACTGCAACGC
GCCTCCGAGA CCTCGATCCG AAACAACCCG GTCCGCCTGG ACCAGGTGAT CCGAGCTGTC
GGCAGCTCAC TGACGGTGGA CACCAACGGC GTGCCCCTGG CGGATCTGGT TCTCGCGCTA
CGGGACCTGC CGACGGACGC CCTACGCGGA ATCCAGATGC CGTCCTACCC ACAGACCATC
GACCAGGTCT CGTACGTCAT CCTCCAGGAA GGCGGCGGCG GGCTCTTCAC CGCCGTCCAG
AACCAGCGGG TGCCGCAGTG GGCCCAGGCC AACCCCCGGT GGGTCACCCA GCTCTGA
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| Protein sequence | MRITHRRWRG GTTSRSKGGR ERADAGVRRG RPRWARLLLG LGLALVLLAG LAAVGLHRLT
QRYDKMVTRE ELLDSGARRG QTDLNGPLNY LLVGTDRWRS SSSTADRRSD TILIVHVPAG
GREAFLMSIP RDLRVTIPAA HGFGGGEDKI NAAYQHGGGG QSGTRLLSAT ITQLTDIRFD
GAAVVDFSGF RDVIDHLGGV RMCVDTEFRS IHTDRVFTPG CQEMDGGTAL DFVRQRYDLP
NGDYDRQTHQ QQLLRAVLQR ASETSIRNNP VRLDQVIRAV GSSLTVDTNG VPLADLVLAL
RDLPTDALRG IQMPSYPQTI DQVSYVILQE GGGGLFTAVQ NQRVPQWAQA NPRWVTQL
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