| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3877 |
|---|
| Symbol | |
|---|
| ID | 9247748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 4647687 |
|---|
| End bp | 4649180 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | cell envelope-related transcriptional attenuator |
|---|
| Protein accession | YP_003681780 |
|---|
| Protein GI | 297562806 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATG ACAGAGCGGG ACGGCAGGGA CCCGCGGAGG AGTTCCGCCG CCAGCGCTCA
CAGCCCCTCC CGCCCGAACG CTCCCCGAGG TCCGGCCGGG TGACCGTGCC CAGCGCCGCC
ACCCGTCGGC GCCGTACCGG CCTGCTGGTG ATGAGCGCGC TGTCGACGCT GGTCCTGCTC
GCCTCGGGCA CCTCGTGGGC GCTCACCGGG TGGATGTCGG GGACCCTGAA CCGGTTCGAC
GTGTTCGGCG GCCTGTCCGA GGAGGGGCGC CCCGAGCAGA CCGGCGGCCT GACCTTCCTG
GTGATCGGCT CCGACAACCG CGACGAGATG AGCGCGGAGG CCCAGGAGGA CCTGAGCGTG
GGCTCCACCC CGGGCCAGCG CTCCGACAGC ATGATGCTGG TGCGGCTCAA CCACGACCGC
GACCACCTCA CCGTCGTCGG CATCCCCCGG GACCTGTGGG TGGACGTCCC CGGCCAGGGT
CCCGACAAGA TCAACGCCGC CTACGCCCAC GGCGGCCCCC AGCTGGCCGT GCGGACCGTG
GAGTCGGTGA CCGACGTGCG CGTCGACCAC TACGTCGAGG TGGACTTCAA CGGCTTCGTG
GACGTGGTGG ACGCCCTGGG CGGCATCGAG GTGTGCCTGC CCGAGGCGAT CCACGACCCC
AAGGCCCAGC TGGACATGGA GGCGGGCACG CACCGGGTGG ACGGGGCCGA GGCCCTGGCC
TTCTCCCGCA CCCGCGCCAC CTCGCGCGGC GACCTGGACC GGATCGAGCG CCAGCAGCAG
GTCCTGTCCG CGATGCTCGA CCAGGCGATG AGCACCGAGA CGCTCTCCGA CCCGGCCAAG
CTGACCGACT TCCTGGACAG CGCCCTGTCG TCGGTGACCG TGGACCAGGG GCTGGACACC
AGCACCATCA ACGAGCTCGC GTACCAGATG CGCGACATCG ACCTGGGCGA GGTCACCTTC
ACCCAGGTGC CCATCGCCGA CATGGAGTAC TGGACGCCGC GCGGCGACGT CGCCGTGCTG
TGGGACGAGC CCGCCGCCCG GGAGCTGTTC GCCGCGGTCC GGGCCGACCG GCCCGTGGAC
GGCTCCGGGG AGGAGGAGCG GGCCGGGTCC GAGCCGGAGC CCGGCGGCAT CCGGGTCCAG
GTGTTCAACG GGATCGGCAC CGCGGGCCTG GGCGCGCAGC TGGACGCCGA GCTGGCCGCG
GCCGGGTTCC AGGTGACCTC CCCGGCGCGG AACTGGAGCA GCCTCGACGT CGCCACCACC
CAGGTGCGCC ACGGTCCCGA CGACGCGGCA GCGGCCGAGT ACGTGGCCGG GATGATGCCG
GGCTCGCAGA CGGTCGAGGA CGACGCACTG GACGGTGGGC TCCAGATCGT GATCGGGTTC
GACTACACGG CGTTCGAGGC CCCGCAGACC GCGGACGCCA CCCCGCGGGA GGAGCCCTCG
GCCGCGGAGG GGACCGGTTC GGTCTCGACC GCGCGGGAGA ACGTCTGCGG GTGA
|
|---|
| Protein sequence | MSDDRAGRQG PAEEFRRQRS QPLPPERSPR SGRVTVPSAA TRRRRTGLLV MSALSTLVLL
ASGTSWALTG WMSGTLNRFD VFGGLSEEGR PEQTGGLTFL VIGSDNRDEM SAEAQEDLSV
GSTPGQRSDS MMLVRLNHDR DHLTVVGIPR DLWVDVPGQG PDKINAAYAH GGPQLAVRTV
ESVTDVRVDH YVEVDFNGFV DVVDALGGIE VCLPEAIHDP KAQLDMEAGT HRVDGAEALA
FSRTRATSRG DLDRIERQQQ VLSAMLDQAM STETLSDPAK LTDFLDSALS SVTVDQGLDT
STINELAYQM RDIDLGEVTF TQVPIADMEY WTPRGDVAVL WDEPAARELF AAVRADRPVD
GSGEEERAGS EPEPGGIRVQ VFNGIGTAGL GAQLDAELAA AGFQVTSPAR NWSSLDVATT
QVRHGPDDAA AAEYVAGMMP GSQTVEDDAL DGGLQIVIGF DYTAFEAPQT ADATPREEPS
AAEGTGSVST ARENVCG
|
|---|
| |