| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3302 |
|---|
| Symbol | |
|---|
| ID | 4598174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 3508257 |
|---|
| End bp | 3509477 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639777908 |
|---|
| Product | cell envelope-related transcriptional attenuator |
|---|
| Protein accession | YP_924491 |
|---|
| Protein GI | 119717526 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1316] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0160587 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGCGA AGCGCCCAAG AACTTCTGGG ACGCGGCACT GGGACAAGGC GGTCCGCCGA
CGCGCACGTA CGCTGGACGT CCGTGGATCT CGGGAATCCT CTGGAAGGAT CCCCGACGTG
CCCGACGCGC CGCCCCCTCA TCACCATCGC CGCACCATCC TGCGGGTCAT CCTGGTCGCC
GAGCTGGTGA TGGCGGTGGT GACCGGGGCG ACGGTCGTGT TCGCCTATCG CCACCTCAAC
GGCAACATCG AGACGCTGCC GACGATCCAG CACCTCGTCG AGCCGCCCGC GGACGTGGCC
GACGAGCCGC GCCAGCCGAT CAACGTGCTC GTGATGGGCT CGGACACCCG CGCCTGCGAC
GGGTGCGGCA TCGACCAGGA GGCCGGCGAG GGCGGCTCGG ACACGACGAT CCTGCTGCAC
GTCTCGGCCG ACCGAGAGCA GACCTACGGG CTGAGCCTGG CGCGCGACAC GATGGTCAGC
CGGCCTGCGT GCGAGGTGGA CGGCGAGACC GTTCCCGCGG AGGACCCGGT CATCTTCAAC
GAGGCGTTCG CGGTCGGTGG TCCGCTGTGC ACCGTGCTCC AGGTCGAGCA CGTGACGGGC
ATCCACATCG ATCACACCGT CGTCGTGAAC TTCGCGGGGT TCGAGGACAT GGTCGACGCC
GTGCACGGCG TGGAGGTCTG CGTCCCCAAG CCGGTCGACG CCTACGGCAT CCATCTCGAG
GCCGGACGCC AGCTCGTGAC CGGCCGCGAC GCGCTCGGCT ACGTGCGCGA GCGGCACGTG
CTCTCCCCCA ACTCCGACCT CGGCCGGATG AAGCGCCAGC AGGCGTTCAT CGCGTCGATG
GTCAAGCGGG TGATGTCCGC CGACACGCTC ACGATGCCGA ACCGGCTCTA CAACTTCCTC
GACGCCGCGA CCAAGTCGAT CCAGGTCGAC AAGGACCTCG CGAGCCTCGG CAAGCTGGTC
GACCTGGCCC AGCAGTTCAA GGGCGCGGAC CTGAAGAAGA TCAAGTTCGT GACCGTGCCG
GTCGAGGAGT ACCCCGCCGA CCCCAACCGG CTCCAGTTCG CCCCGGACGC GAAGCAGCTG
TGGGAGCTGA TCCAGCACGA CCAGCCGCTC GGCAAGTTCG CCAAGGGCGC GATCTCGGCC
GACGACAAGG TCGGCGACCT CGGCGGCGAC CCGAACGACC CGGACGCGAA GGAACGGCTC
GCCAACGGGC TGTGCGCCTG A
|
|---|
| Protein sequence | MGAKRPRTSG TRHWDKAVRR RARTLDVRGS RESSGRIPDV PDAPPPHHHR RTILRVILVA
ELVMAVVTGA TVVFAYRHLN GNIETLPTIQ HLVEPPADVA DEPRQPINVL VMGSDTRACD
GCGIDQEAGE GGSDTTILLH VSADREQTYG LSLARDTMVS RPACEVDGET VPAEDPVIFN
EAFAVGGPLC TVLQVEHVTG IHIDHTVVVN FAGFEDMVDA VHGVEVCVPK PVDAYGIHLE
AGRQLVTGRD ALGYVRERHV LSPNSDLGRM KRQQAFIASM VKRVMSADTL TMPNRLYNFL
DAATKSIQVD KDLASLGKLV DLAQQFKGAD LKKIKFVTVP VEEYPADPNR LQFAPDAKQL
WELIQHDQPL GKFAKGAISA DDKVGDLGGD PNDPDAKERL ANGLCA
|
|---|
| |