Gene Bcav_3844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3844 
Symbol 
ID7860584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4260974 
End bp4262095 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content73% 
IMG OID643867948 
Productcell envelope-related protein transcriptional attenuator 
Protein accessionYP_002883848 
Protein GI229822322 
COG category[K] Transcription 
COG ID[COG1316] Transcriptional regulator 
TIGRFAM ID[TIGR00350] cell envelope-related function transcriptional attenuator common domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTGG CGGTCACGTC CTTCTCGGTG ACGTTCGGCG TCGCCGCGTA CGCGGAGCTC 
CAGCGGCGGG TCGACACCCT CGACATCGGT GGGCTCGTGA CGGCGCAGAC GGCCGACGCG
TCCGCGGACG GCGCGCACCC GGAGGACCCG AACGCCGGAC GTGCGCTCGA CATCCTCGTG
ATCGGGTCGG ACAGCCGGAG CGACGGCGCC GTCCAGGACG AGGTCACCAG CGAGCTCGCG
GACACGCACC TCCTCGTGCA CGTCTCGGCT GACCGGTCCC GCGTCGAGCT CGTCTCGATC
CCGCGCGACG TCATGGTCGA CGTCCCCGCG TGCACGACGA CCGGCGGCGA GACGATCCCC
GCCCGGTTCG ACCAGTTCAA CAGCGCGTTC GCCGTCGGAG CGTCCGTCGG CGGCGACCTC
ACGTCCGCCG TGGCGTGCGA CGTCGAGCTC GTCCAGTCCG TCACGGGGCT GACGCTGGAC
GGCTTCGTCG TCGTCCAGAT GGGCGGGTTC ATCGAGGTCG TCGACGCGCT CGGCGGCGTC
GACATCTGCA TCCCGGCACC GCTCGACGTG CCCAAGGCGT CCCTGGCGCT GCAGGCGGGC
CAGCAACGCC TCGACGGCAC CCAGGCCCTC GCCTACGCAC GCGCGCGAGT GGGTGTGGGC
GACGGCTCGG ACCCGGACCG GATCGCCCGG CAGCAGCATC TGCTCGCGGC GATGGTCGAG
GAGGTCCTCT CCCGCAACGT CCTCGCCGAT GCTCCGGCCC TGTACCAGGT GGTCGCGGCC
ACGCTCGGTT CCCTCACCAC GAGCCCGAAC CTCGCGTCCA TCCCGGAGAT GGTGAGCCTG
GGGCTGAGCC TGAGGTCCGT GGGCCCGGGG AACGTCACGT TCATGACGAC GCCGTTCGAG
GAGTACGAGG CGGAGCCCGG GAGGCTGGTG TTCACGGACG GGGTCGAGGT CCTGTGGGAG
TCGCTCGCTG CCGACGTCCC GCTCGCGTCA CCGCCGGTGT CACCGAGCGC TCCGCCGTCG
GCCGGCGAGG CCGCGACGAC GCCGCCGGCG GCGGACGATC CGGACGCGGC GACCGAGCCT
CCGCCCGACA ACTCCGCCGA GGCGCTCGAC GCCGAGTGCT GA
 
Protein sequence
MALAVTSFSV TFGVAAYAEL QRRVDTLDIG GLVTAQTADA SADGAHPEDP NAGRALDILV 
IGSDSRSDGA VQDEVTSELA DTHLLVHVSA DRSRVELVSI PRDVMVDVPA CTTTGGETIP
ARFDQFNSAF AVGASVGGDL TSAVACDVEL VQSVTGLTLD GFVVVQMGGF IEVVDALGGV
DICIPAPLDV PKASLALQAG QQRLDGTQAL AYARARVGVG DGSDPDRIAR QQHLLAAMVE
EVLSRNVLAD APALYQVVAA TLGSLTTSPN LASIPEMVSL GLSLRSVGPG NVTFMTTPFE
EYEAEPGRLV FTDGVEVLWE SLAADVPLAS PPVSPSAPPS AGEAATTPPA ADDPDAATEP
PPDNSAEALD AEC