More than 300 homologs were found in PanDaTox collection
for query gene Snas_1681 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_1681  cell envelope-related transcriptional attenuator  100 
 
 
357 aa  732    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0240426  normal  0.562376 
 
 
-
 
NC_013947  Snas_6384  cell envelope-related transcriptional attenuator  59.61 
 
 
352 aa  394  1e-108  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6385  cell envelope-related transcriptional attenuator  45.21 
 
 
358 aa  298  7e-80  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6317  cell envelope-related transcriptional attenuator  44.88 
 
 
390 aa  282  6.000000000000001e-75  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0942  cell envelope-related transcriptional attenuator  42.7 
 
 
349 aa  260  3e-68  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.165177  normal  0.737127 
 
 
-
 
NC_009380  Strop_4511  transcription attenuator LytR  32.87 
 
 
358 aa  163  5.0000000000000005e-39  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4011  cell envelope-related transcriptional attenuator  29.7 
 
 
380 aa  157  2e-37  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000201414 
 
 
-
 
NC_009380  Strop_3629  transcription attenuator LytR  30.43 
 
 
378 aa  152  5.9999999999999996e-36  Salinispora tropica CNB-440  Bacteria  normal  0.142384  normal 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  30.29 
 
 
420 aa  143  4e-33  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_5021  cell envelope-related transcriptional attenuator  29.79 
 
 
312 aa  142  6e-33  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00237783 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  30.3 
 
 
414 aa  135  9.999999999999999e-31  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  28.27 
 
 
732 aa  111  2.0000000000000002e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  27.08 
 
 
390 aa  102  1e-20  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  26.55 
 
 
349 aa  100  4e-20  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  28.67 
 
 
468 aa  99.4  8e-20  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  28.01 
 
 
362 aa  99.4  8e-20  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  24.59 
 
 
382 aa  96.7  6e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  27.72 
 
 
618 aa  96.7  6e-19  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  25.95 
 
 
410 aa  95.9  1e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  24.57 
 
 
517 aa  94.4  3e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  28.4 
 
 
478 aa  93.6  5e-18  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4212  cell envelope-related transcriptional attenuator  27.3 
 
 
496 aa  92.8  9e-18  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.134321 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  26.5 
 
 
676 aa  90.9  3e-17  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  27.85 
 
 
509 aa  90.5  4e-17  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  30.73 
 
 
356 aa  90.1  5e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  27.97 
 
 
491 aa  90.1  6e-17  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  25.35 
 
 
480 aa  89.4  8e-17  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  30.16 
 
 
481 aa  89.4  9e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  26.19 
 
 
567 aa  88.6  1e-16  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  30.83 
 
 
311 aa  89.4  1e-16  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  29.93 
 
 
320 aa  87.8  2e-16  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  30.43 
 
 
311 aa  87.4  3e-16  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  30.43 
 
 
311 aa  87.4  3e-16  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  32.11 
 
 
296 aa  87  4e-16  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  27.17 
 
 
573 aa  87  5e-16  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  26.05 
 
 
530 aa  86.7  6e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  29.71 
 
 
393 aa  86.3  7e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  26.69 
 
 
643 aa  86.3  8e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  28.91 
 
 
307 aa  85.5  0.000000000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  28.84 
 
 
394 aa  85.9  0.000000000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  25.26 
 
 
381 aa  85.5  0.000000000000001  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  26.04 
 
 
411 aa  84.7  0.000000000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1198  cell envelope-related transcriptional attenuator  28.79 
 
 
585 aa  84.7  0.000000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  27.2 
 
 
302 aa  84.7  0.000000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  29.36 
 
 
353 aa  85.1  0.000000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  26.84 
 
 
538 aa  84.3  0.000000000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  26.57 
 
 
468 aa  84.3  0.000000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  26.24 
 
 
505 aa  84.3  0.000000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  26 
 
 
319 aa  84  0.000000000000004  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  27.09 
 
 
522 aa  84  0.000000000000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  28.51 
 
 
400 aa  83.6  0.000000000000005  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  30.58 
 
 
414 aa  83.2  0.000000000000006  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3844  cell envelope-related protein transcriptional attenuator  28.74 
 
 
373 aa  83.2  0.000000000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  28.35 
 
 
466 aa  82.8  0.000000000000008  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1157  transcriptional regulator  27.76 
 
 
334 aa  82.8  0.000000000000008  Lactobacillus gasseri ATCC 33323  Bacteria  unclonable  0.000000000000266671  hitchhiker  6.72858e-19 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  26.11 
 
 
521 aa  82.4  0.00000000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  29.66 
 
 
504 aa  81.6  0.00000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_008528  OEOE_1732  transcriptional regulator  25.43 
 
 
296 aa  81.6  0.00000000000002  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  31.43 
 
 
336 aa  81.3  0.00000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  26.5 
 
 
406 aa  81.3  0.00000000000002  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_013235  Namu_4529  cell envelope-related transcriptional attenuator  27.49 
 
 
365 aa  81.6  0.00000000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.25457  normal 
 
 
-
 
NC_010184  BcerKBAB4_5058  membrane-bound transcriptional regulator LytR  29.77 
 
 
304 aa  80.9  0.00000000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  29.39 
 
 
497 aa  80.5  0.00000000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  27.43 
 
 
406 aa  80.5  0.00000000000004  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  29.78 
 
 
299 aa  80.5  0.00000000000004  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_03580  cell envelope-related function transcriptional attenuator common domain protein  29.17 
 
 
448 aa  80.1  0.00000000000005  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.742286  normal  0.880699 
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  27.43 
 
 
560 aa  80.1  0.00000000000005  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  27.58 
 
 
409 aa  80.1  0.00000000000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  29.22 
 
 
304 aa  80.1  0.00000000000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_005945  BAS5115  membrane-bound transcriptional regulator LytR  27.1 
 
 
303 aa  79.7  0.00000000000008  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5506  membrane-bound transcriptional regulator LytR  27.1 
 
 
303 aa  79.7  0.00000000000008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00691653  n/a   
 
 
-
 
NC_011773  BCAH820_5355  membrane-bound transcriptional regulator LytR  27.9 
 
 
303 aa  79  0.0000000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK4961  membrane-bound transcriptional regulator LytR  27.1 
 
 
303 aa  79  0.0000000000001  Bacillus cereus E33L  Bacteria  normal  0.0205697  n/a   
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  27.39 
 
 
344 aa  79.3  0.0000000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  22.83 
 
 
377 aa  78.6  0.0000000000001  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  27.23 
 
 
407 aa  79  0.0000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  27.27 
 
 
304 aa  78.6  0.0000000000002  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  31.08 
 
 
380 aa  78.2  0.0000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  26.05 
 
 
1336 aa  78.6  0.0000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3034  cell envelope-related transcriptional attenuator  25.76 
 
 
379 aa  77.8  0.0000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.63975 
 
 
-
 
NC_008527  LACR_0489  transcription regulator  26.97 
 
 
450 aa  77.4  0.0000000000003  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3385  membrane-bound transcriptional regulator LytR  25 
 
 
313 aa  77.8  0.0000000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009513  Lreu_1057  cell envelope-related transcriptional attenuator  29.95 
 
 
333 aa  77.8  0.0000000000003  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.0371332  n/a   
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  25.44 
 
 
465 aa  77.4  0.0000000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  28.32 
 
 
445 aa  77  0.0000000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_008530  LGAS_1715  transcriptional regulator  28.51 
 
 
374 aa  77.4  0.0000000000004  Lactobacillus gasseri ATCC 33323  Bacteria  normal  hitchhiker  0.00565214 
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  25.81 
 
 
487 aa  76.6  0.0000000000006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  30 
 
 
377 aa  76.6  0.0000000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  25.42 
 
 
625 aa  76.3  0.0000000000007  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  24.2 
 
 
545 aa  76.3  0.0000000000008  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_009513  Lreu_1352  cell envelope-related transcriptional attenuator  25.08 
 
 
488 aa  76.3  0.0000000000008  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00278352  n/a   
 
 
-
 
NC_008531  LEUM_1851  transcriptional regulator  26.71 
 
 
392 aa  76.3  0.0000000000008  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_0378  transcriptional regulator  25.42 
 
 
408 aa  75.9  0.0000000000009  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0016641  n/a   
 
 
-
 
NC_011658  BCAH187_A5436  membrane-bound transcriptional regulator LytR  28.64 
 
 
302 aa  75.5  0.000000000001  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  26.72 
 
 
310 aa  75.5  0.000000000001  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  24.49 
 
 
521 aa  75.5  0.000000000001  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  29.05 
 
 
326 aa  75.5  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_013159  Svir_06070  cell envelope-related function transcriptional attenuator common domain protein  25.38 
 
 
514 aa  75.5  0.000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.974325  normal  0.0563121 
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  25.81 
 
 
377 aa  75.1  0.000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  26.21 
 
 
375 aa  74.7  0.000000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
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