More than 300 homologs were found in PanDaTox collection
for query gene PSPA7_2672 on replicon NC_009656
Organism: Pseudomonas aeruginosa PA7



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009656  PSPA7_2672  putative chemotaxis transducer  100 
 
 
538 aa  1045    Pseudomonas aeruginosa PA7  Bacteria  normal  0.119833  n/a   
 
 
-
 
NC_008463  PA14_31400  putative chemotaxis transducer  94.24 
 
 
575 aa  925    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.307711  hitchhiker  0.0000000000413464 
 
 
-
 
NC_009439  Pmen_1210  methyl-accepting chemotaxis sensory transducer  67.1 
 
 
540 aa  643    Pseudomonas mendocina ymp  Bacteria  normal  normal  0.289047 
 
 
-
 
NC_004578  PSPTO_2526  methyl-accepting chemotaxis protein  64.86 
 
 
559 aa  633  1e-180  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.591236  n/a   
 
 
-
 
NC_009512  Pput_3621  methyl-accepting chemotaxis sensory transducer  64.87 
 
 
555 aa  629  1e-179  Pseudomonas putida F1  Bacteria  normal  normal  0.30858 
 
 
-
 
NC_010501  PputW619_1637  methyl-accepting chemotaxis sensory transducer  65.99 
 
 
538 aa  631  1e-179  Pseudomonas putida W619  Bacteria  normal  0.662156  normal 
 
 
-
 
NC_002947  PP_2120  methyl-accepting chemotaxis sensory transducer  64.87 
 
 
555 aa  617  1e-175  Pseudomonas putida KT2440  Bacteria  normal  normal  0.236845 
 
 
-
 
NC_007492  Pfl01_4317  chemotaxis sensory transducer  67.47 
 
 
540 aa  617  1e-175  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.153995 
 
 
-
 
NC_010322  PputGB1_1660  methyl-accepting chemotaxis sensory transducer  64.87 
 
 
538 aa  615  1e-175  Pseudomonas putida GB-1  Bacteria  normal  normal  0.170942 
 
 
-
 
NC_007912  Sde_1108  putative methyl-accepting chemotaxis sensory transducer  42.08 
 
 
539 aa  384  1e-105  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_3464  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
525 aa  334  2e-90  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2111  methyl-accepting chemotaxis sensory transducer  37.16 
 
 
572 aa  298  1e-79  Marinobacter aquaeolei VT8  Bacteria  normal  0.138456  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.89 
 
 
523 aa  254  3e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  42.53 
 
 
640 aa  247  4e-64  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  44.02 
 
 
713 aa  247  4e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  41.74 
 
 
639 aa  245  1.9999999999999999e-63  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  45.1 
 
 
647 aa  245  1.9999999999999999e-63  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  38.46 
 
 
629 aa  241  2.9999999999999997e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  48.48 
 
 
637 aa  241  2.9999999999999997e-62  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  38 
 
 
640 aa  238  2e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  42.44 
 
 
647 aa  237  4e-61  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  43.1 
 
 
541 aa  237  4e-61  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  41.92 
 
 
739 aa  236  7e-61  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  41.24 
 
 
564 aa  234  3e-60  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  41.92 
 
 
647 aa  234  3e-60  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  45.58 
 
 
552 aa  233  8.000000000000001e-60  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  45.58 
 
 
552 aa  233  8.000000000000001e-60  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  38.74 
 
 
633 aa  233  9e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  33.77 
 
 
541 aa  232  1e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  44.74 
 
 
624 aa  232  2e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  44.31 
 
 
647 aa  231  3e-59  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  42.81 
 
 
712 aa  230  5e-59  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  45.71 
 
 
714 aa  230  6e-59  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  42.81 
 
 
712 aa  230  6e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  45.53 
 
 
714 aa  229  8e-59  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  42.2 
 
 
716 aa  229  8e-59  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  45.53 
 
 
714 aa  229  9e-59  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  35.61 
 
 
638 aa  228  2e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  42.42 
 
 
638 aa  228  2e-58  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2398  methyl-accepting chemotaxis sensory transducer  35.64 
 
 
656 aa  227  5.0000000000000005e-58  Shewanella pealeana ATCC 700345  Bacteria  normal  0.201842  n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  42.12 
 
 
638 aa  226  6e-58  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  41.83 
 
 
714 aa  226  6e-58  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  41.85 
 
 
640 aa  226  1e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  42.12 
 
 
638 aa  225  2e-57  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  34.19 
 
 
620 aa  225  2e-57  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  37.53 
 
 
620 aa  224  3e-57  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  37.53 
 
 
620 aa  224  4e-57  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  37.53 
 
 
620 aa  224  4e-57  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  39.77 
 
 
619 aa  223  7e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  42.37 
 
 
568 aa  222  9.999999999999999e-57  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  39.24 
 
 
541 aa  222  9.999999999999999e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  36.67 
 
 
546 aa  222  9.999999999999999e-57  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  41.09 
 
 
638 aa  222  9.999999999999999e-57  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  45.62 
 
 
572 aa  222  9.999999999999999e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  40.45 
 
 
650 aa  222  9.999999999999999e-57  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  37.53 
 
 
620 aa  221  1.9999999999999999e-56  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  42.98 
 
 
715 aa  221  1.9999999999999999e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  39.12 
 
 
637 aa  221  1.9999999999999999e-56  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  32.04 
 
 
541 aa  220  3.9999999999999997e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  37.97 
 
 
620 aa  220  5e-56  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
634 aa  220  5e-56  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  39.72 
 
 
540 aa  220  6e-56  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
544 aa  220  6e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  39.14 
 
 
773 aa  220  6e-56  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  42.17 
 
 
647 aa  219  1e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_007005  Psyr_0379  histidine kinase, HAMP region: chemotaxis sensory transducer  42.47 
 
 
647 aa  219  1e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.454626  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  42.69 
 
 
543 aa  218  2e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  44.72 
 
 
636 aa  218  2e-55  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  41.76 
 
 
640 aa  218  2e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0728  chemotaxis sensory transducer  37.28 
 
 
639 aa  218  2e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  42.77 
 
 
545 aa  218  2.9999999999999998e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  44.19 
 
 
674 aa  218  2.9999999999999998e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  37.11 
 
 
541 aa  218  2.9999999999999998e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  43.42 
 
 
714 aa  217  4e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  40.66 
 
 
541 aa  217  4e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  42.01 
 
 
541 aa  217  5e-55  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  44.41 
 
 
714 aa  216  5.9999999999999996e-55  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  43.14 
 
 
714 aa  216  7e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  38.48 
 
 
541 aa  216  7e-55  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4653  methyl-accepting chemotaxis sensory transducer  43.88 
 
 
639 aa  216  7e-55  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_4658  methyl-accepting chemotaxis sensory transducer  43.28 
 
 
639 aa  216  9.999999999999999e-55  Pseudomonas putida KT2440  Bacteria  normal  0.415489  normal 
 
 
-
 
NC_009512  Pput_4520  methyl-accepting chemotaxis sensory transducer  43.28 
 
 
639 aa  216  9.999999999999999e-55  Pseudomonas putida F1  Bacteria  normal  normal  0.886367 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  33.21 
 
 
541 aa  215  9.999999999999999e-55  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_010501  PputW619_0778  methyl-accepting chemotaxis sensory transducer  43.41 
 
 
639 aa  215  1.9999999999999998e-54  Pseudomonas putida W619  Bacteria  normal  normal  0.66043 
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  40.93 
 
 
712 aa  215  1.9999999999999998e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  41.34 
 
 
738 aa  215  1.9999999999999998e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  38.81 
 
 
641 aa  214  2.9999999999999995e-54  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  38.95 
 
 
553 aa  214  2.9999999999999995e-54  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  37.63 
 
 
548 aa  214  2.9999999999999995e-54  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_008577  Shewana3_0764  methyl-accepting chemotaxis sensory transducer  35.61 
 
 
620 aa  214  2.9999999999999995e-54  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  37.83 
 
 
632 aa  214  3.9999999999999995e-54  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  37.54 
 
 
674 aa  214  3.9999999999999995e-54  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  39.73 
 
 
629 aa  214  3.9999999999999995e-54  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_003295  RSc1234  methyl-accepting chemotaxis transmembrane protein  33.13 
 
 
514 aa  213  5.999999999999999e-54  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  42.35 
 
 
411 aa  213  7e-54  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  45.4 
 
 
679 aa  213  9e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  39.47 
 
 
629 aa  212  1e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  41.72 
 
 
645 aa  212  1e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3174  methyl-accepting chemotaxis sensory transducer  41.11 
 
 
620 aa  212  1e-53  Shewanella sp. MR-4  Bacteria  normal  0.733563  normal  0.773778 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  33.48 
 
 
638 aa  211  2e-53  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>