More than 300 homologs were found in PanDaTox collection
for query gene Haur_1343 on replicon NC_009972
Organism: Herpetosiphon aurantiacus ATCC 23779



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009972  Haur_1343  response regulator receiver protein  100 
 
 
121 aa  243  6.999999999999999e-64  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_4008  response regulator receiver  42.15 
 
 
1374 aa  88.2  3e-17  Pedobacter heparinus DSM 2366  Bacteria  normal  0.702059  normal 
 
 
-
 
NC_013595  Sros_6397  response regulator receiver protein  35.29 
 
 
237 aa  85.5  2e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.680662  normal  0.0804167 
 
 
-
 
NC_013411  GYMC61_1696  two component transcriptional regulator, winged helix family  39.5 
 
 
224 aa  85.1  3e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_0904  two component transcriptional regulator, winged helix family  38.33 
 
 
254 aa  84.7  4e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.936287  normal  0.32173 
 
 
-
 
NC_009379  Pnuc_2074  two component Fis family transcriptional regulator  39.83 
 
 
227 aa  82.4  0.000000000000002  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0188  two component, sigma54 specific, Fis family transcriptional regulator  41.82 
 
 
452 aa  81.6  0.000000000000003  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0790  two component, sigma54 specific, transcriptional regulator, Fis family  35.77 
 
 
466 aa  82  0.000000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010531  Pnec_1772  two component transcriptional regulator, Fis family  38.98 
 
 
227 aa  80.9  0.000000000000006  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.979845 
 
 
-
 
NC_010322  PputGB1_0297  two component transcriptional regulator  37.1 
 
 
240 aa  80.1  0.000000000000009  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2739  two component transcriptional regulator  38.52 
 
 
241 aa  79.7  0.00000000000001  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.107521 
 
 
-
 
NC_013525  Tter_0789  response regulator receiver protein  34.75 
 
 
278 aa  79.3  0.00000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_0863  response regulator receiver modulated metal dependent phosphohydrolase  34.75 
 
 
351 aa  79.7  0.00000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.297515  normal  0.141829 
 
 
-
 
NC_010524  Lcho_2480  PAS/PAC sensor hybrid histidine kinase  36.44 
 
 
846 aa  79.3  0.00000000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0000000921222 
 
 
-
 
NC_011206  Lferr_0025  two component, sigma54 specific, transcriptional regulator, Fis family  40.5 
 
 
468 aa  79  0.00000000000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0807039 
 
 
-
 
NC_007413  Ava_4702  response regulator receiver Signal transduction histidine kinase  34.17 
 
 
381 aa  79.3  0.00000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0901362  normal 
 
 
-
 
NC_009654  Mmwyl1_3298  response regulator receiver protein  34.17 
 
 
121 aa  79  0.00000000000002  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A0389  two component, sigma54 specific, Fis family transcriptional regulator  39.67 
 
 
432 aa  78.6  0.00000000000002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0648  response regulator receiver protein  34.43 
 
 
123 aa  79  0.00000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.0471753 
 
 
-
 
NC_011761  AFE_0024  nitrogen assimilation regulatory protein NtrX, putative  40.5 
 
 
468 aa  79  0.00000000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_3348  two component transcriptional regulator, Fis family  38.02 
 
 
237 aa  78.2  0.00000000000003  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0287  two component transcriptional regulator  37.1 
 
 
239 aa  78.2  0.00000000000003  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0271  winged helix family two component transcriptional regulator  37.1 
 
 
239 aa  78.2  0.00000000000004  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00195642 
 
 
-
 
NC_010682  Rpic_3671  two component transcriptional regulator, Fis family  38.33 
 
 
236 aa  77.8  0.00000000000004  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2694  putative PAS/PAC sensor protein  34.15 
 
 
969 aa  77.4  0.00000000000005  Roseiflexus sp. RS-1  Bacteria  normal  0.0176534  normal 
 
 
-
 
NC_009972  Haur_1909  response regulator receiver protein  38.98 
 
 
119 aa  77.4  0.00000000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00400917  n/a   
 
 
-
 
NC_007413  Ava_0301  two component LuxR family transcriptional regulator  32.54 
 
 
231 aa  77.4  0.00000000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  0.54347  normal 
 
 
-
 
NC_013457  VEA_000851  probable transcriptional regulator SyrB  34.75 
 
 
221 aa  77.4  0.00000000000006  Vibrio sp. Ex25  Bacteria  decreased coverage  0.00675785  n/a   
 
 
-
 
NC_009767  Rcas_3671  multi-sensor hybrid histidine kinase  39.17 
 
 
1034 aa  77.4  0.00000000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0078  two component response regulator transcription regulator protein  39.32 
 
 
239 aa  77  0.00000000000007  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00000511995  normal 
 
 
-
 
NC_009512  Pput_1937  response regulator receiver protein  34.21 
 
 
117 aa  77  0.00000000000008  Pseudomonas putida F1  Bacteria  normal  0.29733  normal 
 
 
-
 
NC_010524  Lcho_4000  two component Fis family transcriptional regulator  39.17 
 
 
240 aa  77  0.00000000000008  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000203773 
 
 
-
 
NC_009767  Rcas_4445  two component transcriptional regulator  35 
 
 
229 aa  77  0.00000000000008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.14031 
 
 
-
 
NC_013061  Phep_2657  response regulator receiver  35 
 
 
121 aa  77  0.00000000000008  Pedobacter heparinus DSM 2366  Bacteria  normal  0.970877  normal  0.494085 
 
 
-
 
NC_007912  Sde_0667  response regulator receiver domain-containing protein  35 
 
 
1526 aa  77  0.00000000000008  Saccharophagus degradans 2-40  Bacteria  normal  0.0280955  hitchhiker  0.000000898802 
 
 
-
 
NC_013422  Hneap_2080  two component, sigma54 specific, transcriptional regulator, Fis family  38.39 
 
 
461 aa  77  0.00000000000008  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3956  response regulator receiver protein  36.7 
 
 
128 aa  77  0.00000000000008  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.314568 
 
 
-
 
NC_009767  Rcas_3177  adenylate/guanylate cyclase with GAF and PAS/PAC sensors  33.33 
 
 
971 aa  76.6  0.0000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  35 
 
 
229 aa  76.6  0.0000000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.179681 
 
 
-
 
NC_010622  Bphy_0042  two component Fis family transcriptional regulator  38.94 
 
 
229 aa  76.6  0.0000000000001  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_3019  two component, sigma-54 specific, Fis family transcriptional regulator  39.84 
 
 
455 aa  76.3  0.0000000000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0275  putative two component response regulator transcription regulator protein  38.84 
 
 
229 aa  76.6  0.0000000000001  Methylibium petroleiphilum PM1  Bacteria  normal  0.625871  normal  0.0173821 
 
 
-
 
NC_012918  GM21_2194  response regulator receiver sensor signal transduction histidine kinase  33.06 
 
 
452 aa  76.3  0.0000000000001  Geobacter sp. M21  Bacteria  n/a    normal  0.514859 
 
 
-
 
NC_002947  PP_3833  response regulator receiver protein  33.33 
 
 
117 aa  75.9  0.0000000000002  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06763  transcriptional regulatory protein CpxR  34.75 
 
 
221 aa  75.9  0.0000000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010338  Caul_1587  two component transcriptional regulator  39.2 
 
 
261 aa  75.9  0.0000000000002  Caulobacter sp. K31  Bacteria  normal  0.367759  normal  0.752499 
 
 
-
 
NC_007298  Daro_1980  osmolarity response regulator  38.02 
 
 
243 aa  75.5  0.0000000000002  Dechloromonas aromatica RCB  Bacteria  normal  0.431202  normal  0.459947 
 
 
-
 
NC_011146  Gbem_2025  response regulator receiver sensor signal transduction histidine kinase  33.88 
 
 
452 aa  75.9  0.0000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0981  two component transcriptional regulator, LuxR family  37.5 
 
 
221 aa  75.5  0.0000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.416641 
 
 
-
 
NC_013204  Elen_2866  two component transcriptional regulator, winged helix family  38.46 
 
 
231 aa  75.9  0.0000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_0090  two component transcriptional regulator, winged helix family  32 
 
 
228 aa  75.9  0.0000000000002  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4646  two component transcriptional regulator  33.6 
 
 
229 aa  75.9  0.0000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2505  two component transcriptional regulator  35.59 
 
 
226 aa  75.9  0.0000000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.457878  normal 
 
 
-
 
NC_010676  Bphyt_5729  response regulator receiver protein  38.83 
 
 
145 aa  75.5  0.0000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.327194  normal 
 
 
-
 
NC_008752  Aave_4525  two component Fis family transcriptional regulator  37.39 
 
 
238 aa  75.5  0.0000000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA2848  nitrogen regulation protein NtrX, putative  41.53 
 
 
455 aa  75.1  0.0000000000003  Methylococcus capsulatus str. Bath  Bacteria  normal  0.754871  n/a   
 
 
-
 
NC_007347  Reut_A3402  helix-turn-helix, Fis-type  38.46 
 
 
236 aa  75.1  0.0000000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.0473986  n/a   
 
 
-
 
NC_013889  TK90_2268  two component, sigma54 specific, transcriptional regulator, Fis family  36.13 
 
 
459 aa  75.1  0.0000000000003  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.00701331 
 
 
-
 
NC_007973  Rmet_3559  response regulator receiver domain-containing protein  38.46 
 
 
238 aa  75.1  0.0000000000003  Cupriavidus metallidurans CH34  Bacteria  normal  0.0874597  normal 
 
 
-
 
NC_008340  Mlg_2623  two component, sigma54 specific, Fis family transcriptional regulator  36.59 
 
 
456 aa  75.1  0.0000000000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2269  two component Fis family transcriptional regulator  36.97 
 
 
224 aa  74.7  0.0000000000004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.606138  normal  0.860572 
 
 
-
 
NC_009512  Pput_1050  two component transcriptional regulator  33.33 
 
 
260 aa  74.7  0.0000000000004  Pseudomonas putida F1  Bacteria  normal  0.36572  normal 
 
 
-
 
NC_007908  Rfer_0510  two component transcriptional regulator  32.52 
 
 
234 aa  74.7  0.0000000000004  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0516  two component Fis family transcriptional regulator  34.45 
 
 
223 aa  74.7  0.0000000000004  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.0663038 
 
 
-
 
NC_011884  Cyan7425_4555  response regulator receiver sensor signal transduction histidine kinase  33.88 
 
 
406 aa  74.7  0.0000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.330139  normal  0.677797 
 
 
-
 
NC_011884  Cyan7425_4627  two component transcriptional regulator, LuxR family  32.5 
 
 
226 aa  74.7  0.0000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3221  response regulator receiver modulated diguanylate cyclase  33.61 
 
 
443 aa  74.3  0.0000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0497788 
 
 
-
 
NC_009523  RoseRS_3924  response regulator receiver modulated diguanylate cyclase  34.43 
 
 
443 aa  74.3  0.0000000000005  Roseiflexus sp. RS-1  Bacteria  normal  0.350169  normal 
 
 
-
 
NC_007333  Tfu_0343  response regulator receiver  35.59 
 
 
232 aa  74.3  0.0000000000005  Thermobifida fusca YX  Bacteria  normal  0.86362  n/a   
 
 
-
 
NC_011662  Tmz1t_1245  two component transcriptional regulator, winged helix family  36 
 
 
256 aa  74.3  0.0000000000005  Thauera sp. MZ1T  Bacteria  normal  0.0649443  n/a   
 
 
-
 
NC_011884  Cyan7425_4410  response regulator receiver protein  35 
 
 
131 aa  74.3  0.0000000000005  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.686937 
 
 
-
 
NC_013501  Rmar_1501  response regulator receiver protein  31.4 
 
 
132 aa  74.3  0.0000000000005  Rhodothermus marinus DSM 4252  Bacteria  normal  0.153095  n/a   
 
 
-
 
NC_013061  Phep_2522  response regulator receiver  32 
 
 
229 aa  74.3  0.0000000000005  Pedobacter heparinus DSM 2366  Bacteria  normal  0.661278  normal 
 
 
-
 
NC_010681  Bphyt_0316  two component transcriptional regulator, Fis family  37.61 
 
 
229 aa  73.9  0.0000000000006  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A4937  DNA-binding response regulator  33.06 
 
 
229 aa  73.9  0.0000000000006  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4564  DNA-binding response regulator  33.06 
 
 
229 aa  74.3  0.0000000000006  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0173  response regulator receiver protein  31.36 
 
 
119 aa  74.3  0.0000000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007511  Bcep18194_B0398  two component transcriptional regulator  36.67 
 
 
246 aa  74.3  0.0000000000006  Burkholderia sp. 383  Bacteria  normal  normal  0.761758 
 
 
-
 
NC_010322  PputGB1_3548  response regulator receiver protein  33.33 
 
 
117 aa  73.9  0.0000000000006  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0400953 
 
 
-
 
NC_007951  Bxe_A4409  two component Fis family transcriptional regulator  38.05 
 
 
229 aa  73.9  0.0000000000006  Burkholderia xenovorans LB400  Bacteria  normal  0.352798  normal 
 
 
-
 
NC_009483  Gura_2374  response regulator receiver modulated metal dependent phosphohydrolase  34.78 
 
 
348 aa  74.3  0.0000000000006  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2159  two component transcriptional regulator, winged helix family  34.96 
 
 
227 aa  74.3  0.0000000000006  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00177162  n/a   
 
 
-
 
NC_013501  Rmar_0987  two component transcriptional regulator, winged helix family  31.2 
 
 
233 aa  73.9  0.0000000000007  Rhodothermus marinus DSM 4252  Bacteria  normal  0.195539  n/a   
 
 
-
 
NC_002947  PP_1012  winged helix family two component transcriptional regulator  33.9 
 
 
241 aa  73.9  0.0000000000007  Pseudomonas putida KT2440  Bacteria  normal  0.0418267  normal 
 
 
-
 
NC_005957  BT9727_4546  DNA-binding response regulator  33.06 
 
 
229 aa  73.9  0.0000000000007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1352  response regulator receiver protein  36.36 
 
 
410 aa  73.9  0.0000000000007  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2981  two component transcriptional regulator  36.44 
 
 
229 aa  73.9  0.0000000000007  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.0000000201285  n/a   
 
 
-
 
NC_007947  Mfla_0181  two component, sigma54 specific, Fis family transcriptional regulator  39.83 
 
 
423 aa  73.9  0.0000000000007  Methylobacillus flagellatus KT  Bacteria  normal  decreased coverage  0.000041492 
 
 
-
 
NC_013132  Cpin_2852  histidine kinase  32.23 
 
 
1342 aa  73.9  0.0000000000007  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.0012841  normal 
 
 
-
 
NC_010552  BamMC406_5142  two component transcriptional regulator  35.83 
 
 
246 aa  73.9  0.0000000000007  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0161802  normal 
 
 
-
 
NC_010322  PputGB1_1011  two component transcriptional regulator  32.5 
 
 
241 aa  73.9  0.0000000000007  Pseudomonas putida GB-1  Bacteria  normal  0.675078  normal 
 
 
-
 
NC_008391  Bamb_4614  two component transcriptional regulator  35.83 
 
 
246 aa  73.9  0.0000000000007  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2303  response regulator receiver protein  33.33 
 
 
227 aa  73.9  0.0000000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_4969  DNA-binding response regulator  32.26 
 
 
229 aa  73.6  0.0000000000008  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1290  DNA-binding response regulator  32.26 
 
 
245 aa  73.6  0.0000000000008  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4707  DNA-binding response regulator  33.06 
 
 
229 aa  73.6  0.0000000000008  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1111  response regulator receiver:transcriptional regulatory protein, C-terminal  33.06 
 
 
245 aa  73.6  0.0000000000008  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.53214 
 
 
-
 
NC_007530  GBAA_5068  DNA-binding response regulator  33.06 
 
 
229 aa  73.6  0.0000000000008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4932  DNA-binding response regulator  33.06 
 
 
229 aa  73.6  0.0000000000008  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008148  Rxyl_3017  two component transcriptional regulator  34.17 
 
 
225 aa  73.6  0.0000000000008  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
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